|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 877.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTSMFMLLAPIATTLSGTKKGNMYPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKL 80
Cdd:MTH00108 3 LFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 81 DYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV*************** 160
Cdd:MTH00108 83 DYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 161 *****ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHTHNTLP**********************SAMEG*TP 240
Cdd:MTH00108 163 DANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQP 320
Cdd:MTH00108 243 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 321 YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTS 400
Cdd:MTH00108 323 HLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTS 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 401 YTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIQMTM 480
Cdd:MTH00108 403 YTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMTM 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 481 PFYLKITALTVTLLGFTLGLELSLMTQNLKLNSPTNTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLETVL 560
Cdd:MTH00108 483 PLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKIL 562
|
570 580 590
....*....|....*....|....*....|....*...
gi 1165910792 561 PKSISHFQMK*STLVSSQTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00108 563 PKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLL 600
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 704.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTsMFMLLAPIATTLS-GTKKGNMYPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFK 79
Cdd:MTH00137 7 MTSSLILI-FALLIYPLLTTLSpNPQKPNWALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 80 LDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV************** 159
Cdd:MTH00137 86 FDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 160 ******ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHTHN-TLP**********************SAMEG* 238
Cdd:MTH00137 166 ADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDlTLPLLGLILAATGKSAQFGLHPWLPSAMEGP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 239 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGIN 318
Cdd:MTH00137 246 TPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 319 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAAN 398
Cdd:MTH00137 326 QPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 399 TSYTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIQM 478
Cdd:MTH00137 406 TSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVM 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 479 TMPFYLKITALTVTLLGFTLGLEL-SLMTQNLKLNSPTNTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLE 557
Cdd:MTH00137 486 TMPPLLKLAALIVTILGLLIALELaSLTNKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLE 565
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 1165910792 558 TVLPKSISHFQMK*STLVS-SQTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00137 566 KTGPKGIASLQLPLITTTSnIQQGMIKTYLTLFLLTLALATL 607
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 635.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTSMFMLLAPIATTLSgTKKGNMYPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKL 80
Cdd:MTH00004 4 LLNTTTLLTLLILLTPILLPLL-SKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 81 DYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV*************** 160
Cdd:MTH00004 83 DQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 161 *****ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFaIDHTHNTLP**********************SAMEG*TP 240
Cdd:MTH00004 163 EANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-SPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQP 320
Cdd:MTH00004 242 VSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQP 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 321 YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTS 400
Cdd:MTH00004 322 QLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 401 YTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIQMTM 480
Cdd:MTH00004 402 YLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTM 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 481 PFYLKITALTVTLLGFTLGLELSLMTQNLKLNSPTNTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLETVL 560
Cdd:MTH00004 482 PTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMG 561
|
570 580 590
....*....|....*....|....*....|....*....
gi 1165910792 561 PKSISHFQMK*STLVSS-QTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00004 562 PKGLANLQLTASKTLTTlQKGLIKNYLTSFALTILLLLL 600
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 625.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTSMFMLLAPIATTLSgtkkgNMYPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKL 80
Cdd:MTH00066 6 IFNSSMILSLLLLILPLLLPKS-----NNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 81 DYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV*************** 160
Cdd:MTH00066 81 DQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 161 *****ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHThNTLP**********************SAMEG*TP 240
Cdd:MTH00066 161 DANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-STLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTP 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQP 320
Cdd:MTH00066 240 VSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 321 YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTS 400
Cdd:MTH00066 320 QLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTS 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 401 YTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIQMTM 480
Cdd:MTH00066 400 NLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTM 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 481 PFYLKITALTVTLLGFTLGLELSLMTQnlKLNSPTNTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLETVL 560
Cdd:MTH00066 480 PTFMKLAALLVTLLGLLIALDLAKITS--KTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSG 557
|
570 580 590
....*....|....*....|....*....|....*....
gi 1165910792 561 PKSISHFQMK*-STLVSSQTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00066 558 PKGLTNQQLPPiKTITNIQTGLIKTYLTLFLITLLLMLI 596
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-598 |
9.46e-172 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 501.02 E-value: 9.46e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTsMFMLLAPIATTLsgtkkgNMYPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKL 80
Cdd:MTH00211 5 FNSGFLLI-LILLLLPLLLPL------NNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKF 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 81 DYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV*************** 160
Cdd:MTH00211 78 DFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 161 *****ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHTHnTLP**********************SAMEG*TP 240
Cdd:MTH00211 158 DANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDL-TLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQP 320
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 321 YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTS 400
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGS 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 401 YTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIQMTM 480
Cdd:MTH00211 397 YLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 481 PFYLKITALTVTLLGFTLGLELSLMTQNLKLNSPTNtykFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLETVL 560
Cdd:MTH00211 477 PFLLKLMPLLVTIVGLLLGLELVNLTHKQLKTSTLS---FSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLG 553
|
570 580 590
....*....|....*....|....*....|....*....
gi 1165910792 561 PKSISHFQMK*STLVSS-QTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00211 554 PKGLGVNQKKLIKLVTSpQQGLIKSYLALLLLSLLLILL 592
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
31-598 |
6.20e-131 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 397.42 E-value: 6.20e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 31 PLFVKDIISLAFAtSLIPMLMFLASG-QETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSAD 109
Cdd:MTH00208 56 NFSISLLKTLAFL-SLINLLIWILLGcPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSND 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 110 PYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLY 189
Cdd:MTH00208 135 PNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 190 NLNSWDLQQIFAIDHTHNTLP********************---**SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLME 266
Cdd:MTH00208 215 NFNSWNLNEILSLNNSNSFLINILLFGILLAAAGKSAQFGLhpwLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLIS 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 267 NNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIH 346
Cdd:MTH00208 295 NSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIH 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 347 NLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIF 426
Cdd:MTH00208 375 SLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIF 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 427 FALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIqmTMPFYLKITALTVTLLGFTLGleLSLMT 506
Cdd:MTH00208 455 FCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPL--TLPLILKSLPLIVTIIGAAFS--FSFLL 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 507 QNLKLNSPTNTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLILDSTWLETVLPKSISHFQMK*S-TLVSSQTGLIKIY 585
Cdd:MTH00208 531 SLSSNPINSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSkSYQLTQTGYIKQY 610
|
570
....*....|...
gi 1165910792 586 FLSFLV**ILSLL 598
Cdd:MTH00208 611 LLSSTLLFLLILT 623
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
38-535 |
1.16e-78 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 260.68 E-value: 1.16e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 38 ISLAFATSLIPMLMFLASGQETIISN--WHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQF 115
Cdd:TIGR01974 37 VGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRF 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 116 FKYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWD 195
Cdd:TIGR01974 117 FAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLN 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 196 LQQIF--AIDHTHNTLP***********--***********SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTI 271
Cdd:TIGR01974 197 FQEVFalAPGAFFSALTLICLLLFIGAMgkSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 272 QTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDE 351
Cdd:TIGR01974 277 LYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHE 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 352 Q*IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLS 431
Cdd:TIGR01974 357 QDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 432 HPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPP--TSLIQMT--------MPFYLKITALTVTLLGFTLGLE 501
Cdd:TIGR01974 437 KERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLAYL 516
|
490 500 510
....*....|....*....|....*....|....*..
gi 1165910792 502 LSLMTQNLKLNSPTNTYKFSTLLG---YFPTIVHRLF 535
Cdd:TIGR01974 517 LYLGNPTLPAKIAQRHSGLYRLLLnkwYFDELYDKVF 553
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
40-598 |
6.70e-78 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 258.54 E-value: 6.70e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 40 LAFATSLIpmLMFLASGQETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYL 119
Cdd:COG1009 40 AAFVLSLL--LFPAVLGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 120 LTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQI 199
Cdd:COG1009 118 LLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 200 FAIDHT---------------------------HNTLP**********************SAMEG*TPVSALLHSSTMVV 252
Cdd:COG1009 198 LAAAPTilssplltlillllllgafgksaqfplHFWLP----------------------DAMEGPTPVSALLHAATMVK 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 253 AGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAF 332
Cdd:COG1009 256 AGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAF 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 333 FKAMLFMCSGSIIHNLNdEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLI 412
Cdd:COG1009 336 FKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVAL 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 413 ATS-LTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGF--------LLSSNIPPTSLIQMTMPFY 483
Cdd:COG1009 415 LGAfLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLL 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 484 LKITALTVTLLGFTLGLELSLMTQNLKLNSPTNT-YKFSTLLGYFPTIVHRLFSFMSLTFSQkaaTLILDSTWLETVLPK 562
Cdd:COG1009 495 LNALPLLLSLLGIALGYLLYLKRPLPALAERLKPlYRLLANKWYFDELYDALFVKPVRALAR---FLWFDRYVIDGIVNG 571
|
570 580 590
....*....|....*....|....*....|....*.
gi 1165910792 563 SISHFQMK*STLVSSQTGLIKIYFLSFLV**ILSLL 598
Cdd:COG1009 572 LARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLL 607
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-598 |
1.34e-74 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 249.61 E-value: 1.34e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLtsmFMLLAPIATTLSGTK---KGNMYPLFVKDIISLAFatSLIPMLMFLASGQETIISNWHWMTIHTLKLSLS 77
Cdd:MTH00020 1 MYLLVLF---LPLLGALLSGLFGRKigeKGAGILTSSCLIISLSW--SFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 78 FKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV************ 157
Cdd:MTH00020 76 LQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 158 ********ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAI----DHTHNTLP**********************S 233
Cdd:MTH00020 156 TRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMvvsaPSSDITLICLFLFIGAVGKSAQLGLHTWLPD 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:MTH00020 236 AMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVV 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 314 TVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********I 393
Cdd:MTH00020 316 ACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLI 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 394 IEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLSHP--RFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNI- 470
Cdd:MTH00020 396 LELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIw 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 471 -------PPTSLIQMTMPFYLKIT-ALTVTLLGFTLGLELSLMTQNLKLNSptntYKFSTLLGYFPTIVHRLFSFMSLTF 542
Cdd:MTH00020 476 sfqitlpPIVPLSIKLLPVFLSLGgIGLVIILYFYSSKTFRVPFSFIGRNS----YTFLGSAWQFNYILNYFLIKKIWKG 551
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1165910792 543 SQKAATLILDSTWLETVLPKSISHFQMK*STLVSS-QTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00020 552 GHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSlQSGLVFNYALVILIGVAIFIW 608
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
45-598 |
1.96e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 245.82 E-value: 1.96e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 45 SLIPMLMFLASGQETIIsNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLV 124
Cdd:MTH00165 18 LFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 125 TMIILVTANNLFQLFIGWEG--------V********************ALQ*ILYNRIGDVGFLLAMAWFLyNLNSWDL 196
Cdd:MTH00165 97 SMMLLIISPNLISILLGWDGlglvsyclVIYYQNKKSYNA---------GMLTALSNRIGDVAILLSIAWMM-NFGSWNF 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 197 qqIFAIDHTHNTLP**********************S----AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQ 272
Cdd:MTH00165 167 --IFYLDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSwlpaAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 273 TLtLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ 352
Cdd:MTH00165 245 FL-LLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 353 *IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLSH 432
Cdd:MTH00165 324 DIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGD 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 433 PRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIqMTMPFYLKITALTVTLLGFTLGLELSLMTQNLKLN 512
Cdd:MTH00165 404 FNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYM-ICLPFYLKLLTLFVILLGGWLGYELSLMSLSYNLK 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 513 SpTNTYKFSTLLG---YFPTIVHRLFSFMSLTFSQKaATLILDSTWLETVLPKSISHFQMK*STLVSS-QTGLIKIYFLS 588
Cdd:MTH00165 483 S-LKNYKLSSFLGsmwFMPFLSTYGISYYPLNLGSL-SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLS 560
|
570
....*....|
gi 1165910792 589 FLV**ILSLL 598
Cdd:MTH00165 561 FLLWMIILLL 570
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
38-426 |
8.63e-73 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 245.07 E-value: 8.63e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 38 ISLAFATSLIPMLMFLASGQETI-ISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFF 116
Cdd:PRK06590 39 VGLSALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFF 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 117 KYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDL 196
Cdd:PRK06590 119 AYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNY 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 197 QQIFAIDHTHNTLP*************-------*********SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNK 269
Cdd:PRK06590 199 DEVFAAAPQFFGLGWSALTLICLLLFIgamgksaQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSP 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 270 TIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLN 349
Cdd:PRK06590 279 EALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1165910792 350 DEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSYtNAWALTITLIATSLTAIYSTRIIF 426
Cdd:PRK06590 359 HEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIF 434
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
37-596 |
1.31e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 237.82 E-value: 1.31e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 37 IISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFF 116
Cdd:MTH00151 9 FLLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFM 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 117 KYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLynlnswdL 196
Cdd:MTH00151 89 WLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSA-GMLTALTNRIGDVLILLSIALLV-------L 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 197 QQIFAIDHTHNTLP**********************S----AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQ 272
Cdd:MTH00151 161 LGHWSILSMWDFKLSGWLGLLLVLAAMTKSAQIPFSSwlpaAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 273 TLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ 352
Cdd:MTH00151 241 SFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 353 *IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLSH 432
Cdd:MTH00151 321 DIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 433 PRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSLIqMTMPFYLKITALTVTLLGFTLGLeLSLMTQNLKLN 512
Cdd:MTH00151 401 MKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEE-FFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSK 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 513 SPTNTYKFSTlLGYFPTIVHRLFSFMSLTFSqKAATLILDSTWLETVLPKSI-----SHFQMK*STLVSSQTGLIKIYFL 587
Cdd:MTH00151 479 MVKLSFFFSS-MWFLSPLSSQPLKSLSLKLS-NSSMKSLDMGWLEILGGQGVfkankSFSVLNESWPVKWFNFFIGLILL 556
|
....*....
gi 1165910792 588 SFLV**ILS 596
Cdd:MTH00151 557 LVLFLVVIS 565
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
6-595 |
7.20e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 229.12 E-value: 7.20e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 6 MLTSMFMLLAPIATTLSGTKKGNM-YPLFVKDIISLAFATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKLDYFS 84
Cdd:MTH00210 3 ILVLFLPLLSAIISGLFGRKIGTKgAGILTSSCIVISAIVSCCIFYETTLNGSATYIKLWRWFDSELLTTYFGLQFDSLT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 85 MIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV******************* 164
Cdd:MTH00210 83 STMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 165 *ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFA-----IDHTHNTLP**********************SAMEG*T 239
Cdd:MTH00210 163 AAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSllvtnINKESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPT 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 240 PVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQ 319
Cdd:MTH00210 243 PVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISN 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 320 PYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANT 399
Cdd:MTH00210 323 YSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYD 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 400 SYTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLM--GSIFAGFL-----LSSNIPP 472
Cdd:MTH00210 403 KYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLafGSIFVGYLgkevvLSNVIPP 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 473 tsliqmTMPFYLKITALTVTLLGFTLGLEL--SLMTQNLKLNSPTNTYKFSTLLGYFPT------IVHRLFSFMSLTFSQ 544
Cdd:MTH00210 483 ------IVPNSIKMIPLLFSLLGALLAFVIynSMVFLIKISRRGVSIRLYHVIYTFLNSawqfnyVINHFIVKNIWKFGH 556
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1165910792 545 KAATLILDSTWLETVLPKSISHFQMK*STLVSS-QTGLIKIYFLSFLV**IL 595
Cdd:MTH00210 557 LITYRIIDRGLLEIIGPRGISKVLIKLTQKISNlQSGMVFNYALIMIIFTTL 608
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
49-598 |
8.75e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 206.03 E-value: 8.75e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 49 MLMFLASGQETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMII 128
Cdd:MTH00209 19 MFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNF 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 129 LVTANNLFQLFIGWEGV********************ALq*ILYNRIGDVGFLLAMAWFLyNLNSWDLQQIfAIDHTHNT 208
Cdd:MTH00209 99 LIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGML-TALTNRVGDALLILSIAWML-MHGNWNIFYL-NFNSNLGS 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 209 LP**********************SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAM 288
Cdd:MTH00209 176 VISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASM 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 289 CALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL******** 368
Cdd:MTH00209 256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 369 ****V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHL 448
Cdd:MTH00209 336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 449 VNSIKRLLMGSIFAGFLLSSNIPPtSLIQMTMPFYLKITALTVTLLGFTLGLELSLMTQNLKLNSPTNTykFSTLLGYFP 528
Cdd:MTH00209 416 LKPMLVLTLGSITGGSVMSWVMVP-SVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNY--FLSQMWFLP 492
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1165910792 529 TIVHRLFSFMSLTFSQKAATLIlDSTWLETVLPKSISHFQMK*STLV-SSQTGLIKIYFLSFLV**ILSLL 598
Cdd:MTH00209 493 DLSSQPVNKFTMKLSKTMLKLL-DQGWVEKMSGQGSFKVLKKSSKLSqIIQNNSLKLFVTFMMLILLGVIL 562
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
42-598 |
5.34e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 201.53 E-value: 5.34e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 42 FATSLIPMLMFLASGQETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLT 121
Cdd:MTH00207 17 MSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 122 FLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLyNLNSWDLQQIFA 201
Cdd:MTH00207 97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGA-GMITALTNRIGDVMLLLSIGWTL-NQGHWSITNMWQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 202 IDHthNTLP**********************SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*I 281
Cdd:MTH00207 175 TDM--NNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 282 TTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL* 361
Cdd:MTH00207 253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 362 ***********V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITI 441
Cdd:MTH00207 333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHL 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 442 NENNTHLVNSIKRLLMGSIFAGFLLSSNIPPtSLIQMTMPFYLKITALTVTLLG--FTLGLELSLMTQNLKLNSPTNTYK 519
Cdd:MTH00207 413 EDEDKSLTTPMLLLTLGAITSGSALNWWLPT-PQEEPILPLQYKLLPLLVVTLGalLAWLFTTPNITKTPLLINNPLSHF 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 520 FSTLLGYFPTIVHRLFSFMSLTFSQKAATLiLDSTWLETVLPKSISHFQMK*STLV--SSQTGLIKIYFLSFLV**ILSL 597
Cdd:MTH00207 492 ASCLMWFLVPLSSQFIMSTPMNLSHNYLKL-LDQGWLEMLGAQGTFKMFSRSSNNVmkLQKNIPNNYLMMSFVLLTIIII 570
|
.
gi 1165910792 598 L 598
Cdd:MTH00207 571 M 571
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
61-597 |
4.35e-52 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 189.78 E-value: 4.35e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 61 ISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFI 140
Cdd:MTH00032 59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 141 GWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFA-------IDHTHNTLP*** 213
Cdd:MTH00032 139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGgsvgsgiMDRGYYGGGAYE 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 214 ***************------------****SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*I 281
Cdd:MTH00032 219 SPLAPFAIIGILLLIgcigksaqlglhTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 282 TTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPY-LAFLHICTHAFFKAMLFMCSGSIIHNLN-DEQ*IRKMGG 359
Cdd:MTH00032 299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 360 L************V*SLALTGIP**********IIE------------------------------------AANTSYTN 403
Cdd:MTH00032 379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGS 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 404 AWALTITLIATSLTAIYSTRIIFFALLSHPRFP--*LIT--INENNTHLVNSIKRLLMGSIFAGFLLsSNIPPTSLIQMT 479
Cdd:MTH00032 459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkeSLISshINIVDKRVLTVLSLLCFGAIFVGYLI-QDILIGDIEHPI 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 480 MPFYLKITALTVTLLGFTLGLELSLMTQNLKLNSPTNT---------YKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLI 550
Cdd:MTH00032 538 VPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPigpsfllsiYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYKT 617
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1165910792 551 LDSTWLETVLPKSISHFQMK*STLVSS-QTGLIKIYFLSFLV**ILSL 597
Cdd:MTH00032 618 LDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVLLSFTIIFL 665
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
55-426 |
4.07e-44 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 167.12 E-value: 4.07e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 55 SGQETIISNWHWMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANN 134
Cdd:PRK07376 64 QGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPN 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 135 LFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQI---FAIDHTHNTLP* 211
Cdd:PRK07376 144 LVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIadrLSELVSSGAVSG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 212 *********************-------SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTL 284
Cdd:PRK07376 224 WLALLLCILVFLGPMAKSAQFplhvwlpDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAF 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 285 FTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLND--------EQ*IRK 356
Cdd:PRK07376 304 LGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRL 383
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 357 MGGL************V*SLALTGIP**********IIEAANTSYTNAWAltITLIATSLTAIYSTRIIF 426
Cdd:PRK07376 384 MGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALWF--VGFLTAGMTAFYMFRMYF 451
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
420-598 |
5.08e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 149.62 E-value: 5.08e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 420 YSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIPPTSlIQMTMPFYLKITALTVTLLGFTLG 499
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 500 LELSLMTQNLKLNSPT-NTYKFSTLLGYFPTIVHRLFSFMSLTFSQKAATLIlDSTWLETVLPKSISHFQMK*STLVS-S 577
Cdd:pfam06455 80 LELSNLSNKQLKKSLNfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQnS 158
|
170 180
....*....|....*....|.
gi 1165910792 578 QTGLIKIYFLSFLV**ILSLL 598
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLL 179
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-434 |
2.19e-31 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 130.16 E-value: 2.19e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 1 MFTCLMLTSMFMLLAPIATTLSGTKKGnmYPLfvkDIISLAFATSLIPMLMFLASGQETiisNWH--WMT---IHTLKLS 75
Cdd:PRK12650 1 LLAVLALAALAVVLAPPLVRVLDRKAG--WPL---AAIFVAAAGLLLKELPPILDGDAL---TWSvtWIPdllGNGVDVN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 76 LSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV********** 155
Cdd:PRK12650 73 LALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 156 **********ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDH-THNTLP**********************-- 232
Cdd:PRK12650 153 SGSGGEAG--SIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwAEKPGLTTVVAVLIAVAAFTKSAQFPFHfw 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 233 --SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGL 310
Cdd:PRK12650 231 lpEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGW 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 311 MIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP***** 387
Cdd:PRK12650 311 IVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGTRD-IRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGF 389
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1165910792 388 *****IIEAANTSYTNAWALTITLIATSLTAI----YSTRIIFFALLSHPR 434
Cdd:PRK12650 390 VSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
45-382 |
3.71e-29 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 123.11 E-value: 3.71e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 45 SLIPMLMFL---------ASGqETIISNWHWmtIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQF 115
Cdd:PRK12647 21 ALLPLALFLyflsfipeiAAG-ETVRGGYAW--VPSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 116 FKYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVgFLLAMAWFLYNLN-SW 194
Cdd:PRK12647 98 YSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGL-ALLAGLILLGNVTgTY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 195 DLQQIFAI-----DHTHNTLP**********************SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNK 269
Cdd:PRK12647 177 SLSELLASgdvirEHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTP 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 270 TIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYL---AFLHICTHAFFKAMLFMCSGSIIH 346
Cdd:PRK12647 257 LWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDH 336
|
330 340 350
....*....|....*....|....*....|....*.
gi 1165910792 347 NLNDEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK12647 337 ETGTRD-ITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
132-397 |
9.20e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 113.18 E-value: 9.20e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 132 ANNLFQLFIGWEGV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHTHNTLP* 211
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 212 *********************------SAMEG*TPVSALLhSSTMVVAGVFLLIRFHPLMEN-NKTIQTLTLCLG*ITTL 284
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFhtwlpdAYEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 285 FTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL* 361
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270
....*....|....*....|....*....|....*.
gi 1165910792 362 ***********V*SLALTGIP**********IIEAA 397
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
234-360 |
1.28e-26 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 114.99 E-value: 1.28e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:CHL00025 253 AMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMML 332
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1165910792 314 TVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQ*IRKMGGL 360
Cdd:CHL00025 333 ALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGL 387
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
74-428 |
8.68e-24 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 104.46 E-value: 8.68e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 74 LSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEgV******** 153
Cdd:COG0651 68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFE-VMLLASYGL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 154 ************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAIDHTHNTlp**********************S 233
Cdd:COG0651 147 VALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDP-------GLLLAAFALLLVGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AM------------EG*TPVSALLhSSTMVVAGVFLLIRFHPLM---ENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKK 298
Cdd:COG0651 220 ALfplhfwlpdaypAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKR 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 299 IIAFSTSSQLGLMIVTVGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQ*IRKMGGL************V*S 375
Cdd:COG0651 299 LLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGA 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1165910792 376 LALTGIP**********IIEAANTSytNAWALTITLIATS-LTAIYSTRIIFFA 428
Cdd:COG0651 378 LALAGLPPLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
74-431 |
2.21e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 104.23 E-value: 2.21e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 74 LSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV******** 153
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 154 ************ALQ*ILYNRIGDVGFLLAMAWFLYNLNSWDLQQIFAidhthnTLP**********************S 233
Cdd:MTH00095 117 LFYNNWDSNSG-AMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFFS------SSMILMLLLTSFTKSAQFPFSSWLPK 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMeNNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:MTH00095 190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 314 TVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********I 393
Cdd:MTH00095 269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
|
330 340 350
....*....|....*....|....*....|....*...
gi 1165910792 394 IEAANTSYTNAWALTITLIATSLTAIYSTRIIFFALLS 431
Cdd:MTH00095 349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
234-382 |
4.20e-23 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 104.50 E-value: 4.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKT---IQTLTlclG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGL 310
Cdd:PRK12648 233 AMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEwfwIVGGA---GLITLLLGAYFALFQHDLKGLLAYSTISHLGL 309
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1165910792 311 MIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHnlndE---Q*IRKMGGL************V*SLALTGIP 382
Cdd:PRK12648 310 ITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVP 383
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-382 |
1.49e-22 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 102.60 E-value: 1.49e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 74 LSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV******** 153
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 154 ************ALQ*ILYNRIGDVgFLLAMAWFLYNLN-SWDLQQIFAIDHTHNTLP********************** 232
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGL-FMFAGFLLLHVITgTYDIATILQDSELIENIKGHPLFLITLILIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 233 --------SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFST 304
Cdd:PRK12649 231 gpfyiwlpNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 305 SSQLGLMIVTVGI---NQPYLAF----LHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLA 377
Cdd:PRK12649 311 ISQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAATRD-IRKLGGLRKEMPITFIVASIAALA 389
|
....*
gi 1165910792 378 LTGIP 382
Cdd:PRK12649 390 MAGIP 394
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
66-382 |
2.51e-22 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 101.76 E-value: 2.51e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 66 WMTIhtLKLSLSFKLDYFSMIFV**********MEFSMWYMSAD-PYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEG 144
Cdd:PRK12646 64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 145 V********************ALQ*ILYNRIGDVgFLLAMAWFLY-----NLNSWDLQQIFAIDHTHNTLP********* 219
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGL-ALLVGFIMLYimtgtNNITEILGQADHIKNHGLFIPMIFMFLLGA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 220 ***********-**SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKK 298
Cdd:PRK12646 221 FTKSAQFPFHIwLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKG 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 299 IIAFSTSSQLGLMIVTVGINQPYL-----------------AFLHICTHAFFKAMLFMCSGSIIHNlNDEQ*IRKMGGL* 361
Cdd:PRK12646 301 ILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMR 379
|
330 340
....*....|....*....|.
gi 1165910792 362 ***********V*SLALTGIP 382
Cdd:PRK12646 380 QLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
233-428 |
3.61e-21 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 98.46 E-value: 3.61e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 233 SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMI 312
Cdd:PRK12644 228 GAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLT 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 313 VTVGINQP--YLAFLH-ICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP******* 389
Cdd:PRK12644 308 VLVGIGTRdaALAGLAmLLAHALFKAALFLVVGIIDHSTGTRD-IRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVA 386
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1165910792 390 ***IIEA----ANTSYTNAWALTITLIATSLTAIYSTRIIFFA 428
Cdd:PRK12644 387 KEAALEAvlhdGALGPAGPVVLAGIVLGSILTVAYSLRFLWGA 429
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
234-424 |
3.28e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 94.59 E-value: 3.28e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSaLLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:PRK07390 247 AMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFI 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 314 TVGINQPYLAFLHICTHAFFKAMLFMCSGSIIHNLNDeQ*IRKMGGL************V*SLALTGIP**********I 393
Cdd:PRK07390 326 AVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWALLRL 404
|
170 180 190
....*....|....*....|....*....|.
gi 1165910792 394 IEaaNTSYTNAWALTITLIATSLTAIYSTRI 424
Cdd:PRK07390 405 AD--GLWAVSPWLVGVLLLVNALTAFNLTRV 433
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
233-489 |
7.05e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 93.02 E-value: 7.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 233 SAMEG*TPVSALLHSSTMVVAGVFLLIR-----FHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQ 307
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRiyftvFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 308 LGLMIVTVGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP** 384
Cdd:PRK08375 307 MGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR-LSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 385 ********IIEAANtsYTNAWALTITLIATSL-TAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAG 463
Cdd:PRK08375 386 SGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLG 463
|
250 260
....*....|....*....|....*.
gi 1165910792 464 FLLSsniPPTSLIQMTMPFYLKITAL 489
Cdd:PRK08375 464 IYAG---PLLQLADAAAAGLLGTSAY 486
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
100-345 |
5.30e-19 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 90.53 E-value: 5.30e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 100 EFSMWYMSADPYMNQFFKYLLTFLVTMIILVTANNLFQLFIGWEGV********************ALQ*ILYNRIGDVG 179
Cdd:PRK08168 87 RFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELL 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 180 FLLAMAWFLYNLNSWDLQQIFAIDHTHNTLP********************-----**SAMEG*TPVSALLHSSTMVVAG 254
Cdd:PRK08168 167 LLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLpvhgwLIQVMEAPTPVSALLHAGVVNLGG 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 255 vFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYLAFLHICTHAFFK 334
Cdd:PRK08168 247 -FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYK 325
|
250
....*....|.
gi 1165910792 335 AMLFMCSGSII 345
Cdd:PRK08168 326 AHAFLSASEAV 336
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
234-382 |
3.78e-17 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 85.36 E-value: 3.78e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLM-ENNKTIQTLTLcLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMI 312
Cdd:PRK12645 236 AMEAPTPVSAYLHSATMVKAGIYLVARFTPIFaGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIM 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 313 VTVGI-----------NQPYL-----AFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SL 376
Cdd:PRK12645 315 SLLGIgaaslhyqgddSKIYAaaitaAIFHLINHATFKGSLFMIVGIVDHETGTRD-IRKLGGLMTIMPITFTIALIGAL 393
|
....*.
gi 1165910792 377 ALTGIP 382
Cdd:PRK12645 394 SMAGLP 399
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
113-421 |
3.87e-15 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 78.09 E-value: 3.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 113 NQFFKYLLTFLVTMIILVTANNLFQLFIGWEgV********************ALQ*ILYNRIGDVGFLLAMAWFLYNLN 192
Cdd:PRK06525 113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFE-ITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 193 SWDLQQIFAIDHTHNTLP**********************SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMEN-NKTI 271
Cdd:PRK06525 192 TFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiPHVI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 272 QTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTV--GINQPYLAF----LHICTHAFFKAMLFMCSGSII 345
Cdd:PRK06525 272 GYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALS 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1165910792 346 HNLNdEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSYTNAWALTITLIATSLTAIYS 421
Cdd:PRK06525 352 YSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
239-434 |
5.25e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 78.09 E-value: 5.25e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 239 TPVSALLhSSTMVVAGVFLLIRF--------HPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGL 310
Cdd:PRK12667 255 SPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGY 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 311 MIVTVGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNdEQ*IRKMGGL************V*SLALTGIP***** 387
Cdd:PRK12667 334 IFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGF 412
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1165910792 388 *****IIEAAnTSYTNAWALTITLIATSLTAIYSTRIIFFALLSHPR 434
Cdd:PRK12667 413 FSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
240-382 |
1.40e-11 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 67.22 E-value: 1.40e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 240 PVSALLhSSTMVVAGVFLLIR--FHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGI 317
Cdd:PRK06521 243 HVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGL 321
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1165910792 318 -------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHNLNdEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK06521 322 amvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALP 399
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
234-345 |
1.77e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 66.83 E-value: 1.77e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLg*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:MTH00063 183 AMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVLL-LLTIFITGVSSLFFSDLKKIVALSTCNNISWCVL 261
|
90 100 110
....*....|....*....|....*....|..
gi 1165910792 314 TVGINQPYLAFLHICTHAFFKAMLFMCSGSII 345
Cdd:MTH00063 262 YLIYGDVILSLFQLVSHGVSKCLLFMLVGDVM 293
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
240-425 |
7.12e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 64.79 E-value: 7.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 240 PVSALLhSSTMVVAGVFLLIRFHPLMENNK---TIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVG 316
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 317 INQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********I 393
Cdd:PRK08377 318 LGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
170 180 190
....*....|....*....|....*....|...
gi 1165910792 394 IEAA-NTSYTnaWALTITLIATSLTAIYSTRII 425
Cdd:PRK08377 397 ILAGlSAGYT--WPVALVLGASVVEAVYYFRLI 427
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
233-439 |
2.57e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 62.91 E-value: 2.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 233 SAMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLT-----LCLG*ITTLFTA-MCALTQNDIKKIIAFSTSS 306
Cdd:PRK06589 235 AAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIKKILAYSTIS 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 307 QLGLMIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIhNLNDEQ*IRKMGGL************V*SLALTGIP* 383
Cdd:PRK06589 315 QLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1165910792 384 *********IIEAANTSyTNAWALTITLIATSLTAIYSTrIIFFALLSHPRFP*LI 439
Cdd:PRK06589 394 FSGFISKFLILLAASEQ-NQPWLSIIVMLVVIASSILSA-LYLLKILSSIYKPSLS 447
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
234-484 |
4.16e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 62.28 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 234 AMEG*TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLtlcLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIV 313
Cdd:PRK07234 210 THSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 314 T--VGinqpylAFLHIcTHAFFKAMLFMCSGsIIHNLNDEQ*IRKMGGl************V*SLALTGIP********* 391
Cdd:PRK07234 287 AplVG------GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLG-----IGKWIPLTMASFSIAGFPLLAGFVSKV 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 392 *IIEAANTsytnaWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAGFLLSSNIP 471
Cdd:PRK07234 354 LTLKNLLP-----WQAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGNILK 428
|
250
....*....|...
gi 1165910792 472 PTSLIQMTMPFYL 484
Cdd:PRK07234 429 ALLTIGLGWLPYF 441
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
239-382 |
1.47e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 60.90 E-value: 1.47e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 239 TPVSALLhSSTMVVAGVFLLIRF-HPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGI 317
Cdd:PRK08667 237 SNVSALM-SGVMLKVAVYGLVRFlMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGL 315
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1165910792 318 -------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHNLNDEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK08667 316 yvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGTRN-IEKMGGLVKLMPYTSALFLVGAVSIAALP 393
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
239-349 |
1.73e-09 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 60.43 E-value: 1.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 239 TPVSALLHSStMVVAGVFLLIRFHPLMeNNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGIN 318
Cdd:PRK08601 235 TPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALG 312
|
90 100 110
....*....|....*....|....*....|.
gi 1165910792 319 QPYLAFLHICTHAFFKAMLFMCSGSIIHNLN 349
Cdd:PRK08601 313 AYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
236-382 |
2.68e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 59.94 E-value: 2.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 236 EG*TPVSALLHSSTMVVAgVFLLIRFHPLME---NNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMI 312
Cdd:PRK06458 243 EAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1165910792 313 VTVGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHNLnDEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK06458 322 FALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
239-463 |
1.20e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 57.65 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 239 TPVSALLhSSTMVVAGVFLLIRFHPLM--ENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVG 316
Cdd:PRK12663 238 TEVAALF-AALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 317 INQP--------YLAFLHIcthafFKAMLFMCSGSIIHnLNDEQ*IRKMGGL************V*SLALTGIP****** 388
Cdd:PRK12663 317 LGTPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFW 390
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1165910792 389 ****IIEAANTSytNAWALTITLIATSLTAIYSTRIIFFALLSHPRFP*LITINENNTHLVNSIKRLLMGSIFAG 463
Cdd:PRK12663 391 GKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
278-382 |
1.55e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.70 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 278 LG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNlNDEQ*I 354
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKI 356
|
90 100
....*....|....*....|....*...
gi 1165910792 355 RKMGGL************V*SLALTGIP 382
Cdd:PRK08668 357 SEMGGLIEKMPFTFAMYLVAIISLAGIP 384
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
273-425 |
2.38e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 56.67 E-value: 2.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 273 TLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHNLN 349
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1165910792 350 DEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSytNAWALTITLIATS-LTAIYSTRII 425
Cdd:PRK12662 360 TTK-LEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSgLSVIYVWKIV 433
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
278-434 |
3.01e-08 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 56.44 E-value: 3.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 278 LG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHNLNDEQ*I 354
Cdd:PRK12668 246 IGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTGTEK-L 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 355 RKMGGL************V*SLALTGIP**********IIEAAntSYTNAWALTITLIATSLTAIYSTRIIF--FALLSH 432
Cdd:PRK12668 325 TELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAA--GEDHYVWVWLLLLLASAGTFLHFGIKLpyFAFFGG 402
|
..
gi 1165910792 433 PR 434
Cdd:PRK12668 403 DS 404
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
254-420 |
1.63e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.20 E-value: 1.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 254 GVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPY---LAFLHICTH 330
Cdd:PRK12665 255 GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHH 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 331 AFFKAMLFMCSGsIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIEA-ANTSYTNAWALTI 409
Cdd:PRK12665 335 ITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVA 413
|
170
....*....|.
gi 1165910792 410 TLIATSLTAIY 420
Cdd:PRK12665 414 GGVVTSLLTLY 424
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
254-426 |
1.94e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.80 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 254 GVFLLIRFHPLMENNKT--IQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYL---AFLHIC 328
Cdd:PRK07691 255 GVYAIARTFTLFFSHDTsfTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLI 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 329 THAFFKAMLFMCSGSIIHnLNDEQ*IRKMGGL************V*SLALTGIP**********IIEAANTSytNAWALT 408
Cdd:PRK07691 335 HDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEA--GFYVSG 411
|
170
....*....|....*...
gi 1165910792 409 ITLIATSLTAIYSTRIIF 426
Cdd:PRK07691 412 IIVLLSSLLVLYSVIKIF 429
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
267-382 |
3.07e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 3.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 267 NNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGINQPYL---------------AFLHICTHA 331
Cdd:PRK08376 282 NLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHA 361
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1165910792 332 FFKAMLFMCSGSIIH-----NLNdeq*irKMGGL************V*SLALTGIP 382
Cdd:PRK08376 362 LYKALLFLTAGAVIYetgtrNLN------ELGGLARTMPKTTIAFLIGAAAIVGLP 411
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
66-116 |
2.97e-06 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 44.34 E-value: 2.97e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1165910792 66 WMTIHTLKLSLSFKLDYFSMIFV**********MEFSMWYMSADPYMNQFF 116
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
278-382 |
2.61e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.12 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 278 LG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGlmIVTVGI---NQPYL--AFLHICTHAFFKAMLFMCSGSIIHNLNDEQ 352
Cdd:PRK05846 283 LGVIAIIYGALVALAQTDIKKLIAYSSISHMG--FVTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTRD 360
|
90 100 110
....*....|....*....|....*....|
gi 1165910792 353 *IRKMGGL************V*SLALTGIP 382
Cdd:PRK05846 361 -IADYGGLAKVMPVLAAFFLFFAMASLGLP 389
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
241-382 |
3.68e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 46.67 E-value: 3.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLhSSTMVVAGVFLLIRFHPLMENNK---TIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGI 317
Cdd:PRK08676 240 VSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGI 318
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1165910792 318 NQP---YLAFLHICTHAFFKAMLFMCSGsIIHNLNDEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK08676 319 GTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMP 385
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
241-397 |
1.01e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.02 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 241 VSALLH--SSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVGIN 318
Cdd:PRK06277 233 GSALLQtfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 319 QPY---LAFLHICTHAFFKAMLFMCSGsIIHNLNDEQ*IRKMGGL************V*SLALTGIP**********IIE 395
Cdd:PRK06277 313 TPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
..
gi 1165910792 396 AA 397
Cdd:PRK06277 392 AA 393
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
274-382 |
1.85e-04 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 44.43 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1165910792 274 LTLCLG*ITTLFTAMCALTQNDIKKIIAFSTSSQLGLMIVTVG-------INQPYLAFL-------HICTHAFFKAMLFM 339
Cdd:PRK08042 247 ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFL 326
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1165910792 340 CSGSIIHNlNDEQ*IRKMGGL************V*SLALTGIP 382
Cdd:PRK08042 327 GAGSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALP 368
|
|
| |
