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Conserved domains on  [gi|1039018506|gb|ANM67775|]
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disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 6-885 2.92e-117

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 398.09  E-value: 2.92e-117
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210    14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210    92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210   171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210   247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210   324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210   404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210   484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210   557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210   637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210   717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210   776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                          890       900       910       920       930       940
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039018506  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210   843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1538 3.02e-41

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


:

Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 149.44  E-value: 3.02e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039018506 1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECS 1538
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANIWHSKS 143
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1064 6.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886     22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLALLDTLDLKNcNRLRHLPMEMHNLNPLKVLDLSNCsELEVFT 957
Cdd:COG4886    102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANLTNLKELDLSN-NQLTDLPEPLGNLTNLKSLDLSNN-QLTDLP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  958 SSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLL 1037
Cdd:COG4886    176 EELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLE 231

                          250       260
                   ....*....|....*....|....*....
gi 1039018506 1038 SLRLRYCeNLRSLPQLPR--SLQLLNAHG 1064
Cdd:COG4886    232 TLDLSNN-QLTDLPELGNltNLEELDLSN 259
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 1294-1380 3.44e-08

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.44e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210   418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                   ....*...
gi 1039018506 1373 FSREIIHM 1380
Cdd:PLN03210   497 MGKEIVRA 504
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 6-885 2.92e-117

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 398.09  E-value: 2.92e-117
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210    14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210    92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210   171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210   247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210   324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210   404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210   484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210   557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210   637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210   717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210   776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                          890       900       910       920       930       940
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039018506  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210   843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1538 3.02e-41

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 149.44  E-value: 3.02e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039018506 1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECS 1538
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANIWHSKS 143
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1391-1540 5.04e-39

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 159.27  E-value: 5.04e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1391 MASGSPCNRN--NDVFVSFHGKDFRKQFISDFLKKLVYKGIrICIGDKILSRS-----LINKVIKESSIAVVVFSENYAS 1463
Cdd:PLN03210     1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLI-IAFKDNEIERSqsldpELKQAIRDSRIAVVVFSKNYAS 79

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039018506 1464 SSLCLLQLMEIMKCWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECSLN 1540
Cdd:PLN03210    80 SSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQN 156
TIR smart00255
Toll - interleukin 1 - resistance;
1402-1533 9.67e-37

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 135.53  E-value: 9.67e-37
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  1402 DVFVSFHGK-DFRKQFISDFLKKLVYKGIRICIGDKILSRSL---INKVIKESSIAVVVFSENYASSSLCLLQLMEIMKC 1477
Cdd:smart00255    3 DVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDleeIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALEN 82

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1039018506  1478 WEELGQ-VVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDE-RQRWSRALTDAASI 1533
Cdd:smart00255   83 ALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 7-163 9.98e-27

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 107.84  E-value: 9.98e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    7 VYISFnRWEDTiRHSFVSHLSAEFQRKGVSVFASE-DSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:pfam01582    3 VFLSF-RGSDT-REWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506   86 KCRRSKGLVVVPVFYGLTNSIV-----------KKHCLELKKmypdDKVDEWRNALWDIADLRgghVSSHKRSDSELVEK 154
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVrkqtgsfgkafKKHKKVLTE----EKVLKWRGALNEVANIW---HSKSVSDESKFWKK 153


                   ....*....
gi 1039018506  155 IVADVRQKL 163
Cdd:pfam01582  154 IAYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
6-136 6.45e-19

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 84.68  E-value: 6.45e-19
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506     6 EVYISFNRWEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDdRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:smart00255    3 DVFISYSGKED-VRNEFLSHLLEKLRGYGLCVFIDDFEPGG-GDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039018506    86 KCRRSKG-LVVVPVFYGLTNS-----------IVKKHCLELKKmypDDKVDEWRNALWDIADL 136
Cdd:smart00255   81 ENALEEGgLRVIPIFYEVIPSdvrkqpgkfrkVFKKNYLKWPE---DEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1064 6.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886     22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLALLDTLDLKNcNRLRHLPMEMHNLNPLKVLDLSNCsELEVFT 957
Cdd:COG4886    102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANLTNLKELDLSN-NQLTDLPEPLGNLTNLKSLDLSNN-QLTDLP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  958 SSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLL 1037
Cdd:COG4886    176 EELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLE 231

                          250       260
                   ....*....|....*....|....*....
gi 1039018506 1038 SLRLRYCeNLRSLPQLPR--SLQLLNAHG 1064
Cdd:COG4886    232 TLDLSNN-QLTDLPELGNltNLEELDLSN 259
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
620-881 3.06e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 3.06e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  620 DELQYSPNIEKIDLKGCLELQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLTr 699
Cdd:COG4886     18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLT- 96

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  700 KLENVSSSNQDHRKQVLKLK----DSSHLGSLPD-IVIFESLEVLDFSGC--SEL-EDIQGFPqNLKRLYLAKTAIKEVP 771
Cdd:COG4886     97 NLTELDLSGNEELSNLTNLEsldlSGNQLTDLPEeLANLTNLKELDLSNNqlTDLpEPLGNLT-NLKSLDLSNNQLTDLP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  772 SSLChHISKLVKLDMENCeRLRDLPMGMSNMKYLAVLKLSGCsnleNIKELP------RNLKELYLAGTAVKEFPStlLE 845
Cdd:COG4886    176 EELG-NLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGN----QLTDLPeplanlTNLETLDLSNNQLTDLPE--LG 247

                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1039018506  846 TLSEVVLLDLENCkKLQGLPTGmSKLEFLVMLKLSG 881
Cdd:COG4886    248 NLTNLEELDLSNN-QLTDLPPL-ANLTNLKTLDLSN 281
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1294-1380 3.44e-08

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.44e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210   418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                   ....*...
gi 1039018506 1373 FSREIIHM 1380
Cdd:PLN03210   497 MGKEIVRA 504
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 6-885 2.92e-117

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 398.09  E-value: 2.92e-117
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210    14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210    92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210   171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210   247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210   324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210   404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210   484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210   557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210   637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210   717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210   776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                          890       900       910       920       930       940
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039018506  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210   843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1538 3.02e-41

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 149.44  E-value: 3.02e-41
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039018506 1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECS 1538
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANIWHSKS 143
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1391-1540 5.04e-39

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 159.27  E-value: 5.04e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1391 MASGSPCNRN--NDVFVSFHGKDFRKQFISDFLKKLVYKGIrICIGDKILSRS-----LINKVIKESSIAVVVFSENYAS 1463
Cdd:PLN03210     1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLI-IAFKDNEIERSqsldpELKQAIRDSRIAVVVFSKNYAS 79

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039018506 1464 SSLCLLQLMEIMKCWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECSLN 1540
Cdd:PLN03210    80 SSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQN 156
TIR smart00255
Toll - interleukin 1 - resistance;
1402-1533 9.67e-37

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 135.53  E-value: 9.67e-37
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  1402 DVFVSFHGK-DFRKQFISDFLKKLVYKGIRICIGDKILSRSL---INKVIKESSIAVVVFSENYASSSLCLLQLMEIMKC 1477
Cdd:smart00255    3 DVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDleeIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALEN 82

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 1039018506  1478 WEELGQ-VVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDE-RQRWSRALTDAASI 1533
Cdd:smart00255   83 ALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 7-163 9.98e-27

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 107.84  E-value: 9.98e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    7 VYISFnRWEDTiRHSFVSHLSAEFQRKGVSVFASE-DSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:pfam01582    3 VFLSF-RGSDT-REWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506   86 KCRRSKGLVVVPVFYGLTNSIV-----------KKHCLELKKmypdDKVDEWRNALWDIADLRgghVSSHKRSDSELVEK 154
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVrkqtgsfgkafKKHKKVLTE----EKVLKWRGALNEVANIW---HSKSVSDESKFWKK 153


                   ....*....
gi 1039018506  155 IVADVRQKL 163
Cdd:pfam01582  154 IAYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
6-136 6.45e-19

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 84.68  E-value: 6.45e-19
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506     6 EVYISFNRWEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDdRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:smart00255    3 DVFISYSGKED-VRNEFLSHLLEKLRGYGLCVFIDDFEPGG-GDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039018506    86 KCRRSKG-LVVVPVFYGLTNS-----------IVKKHCLELKKmypDDKVDEWRNALWDIADL 136
Cdd:smart00255   81 ENALEEGgLRVIPIFYEVIPSdvrkqpgkfrkVFKKNYLKWPE---DEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1064 6.49e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 81.90  E-value: 6.49e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886     22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLALLDTLDLKNcNRLRHLPMEMHNLNPLKVLDLSNCsELEVFT 957
Cdd:COG4886    102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANLTNLKELDLSN-NQLTDLPEPLGNLTNLKSLDLSNN-QLTDLP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  958 SSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSIKDFSKLL 1037
Cdd:COG4886    176 EELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLE 231

                          250       260
                   ....*....|....*....|....*....
gi 1039018506 1038 SLRLRYCeNLRSLPQLPR--SLQLLNAHG 1064
Cdd:COG4886    232 TLDLSNN-QLTDLPELGNltNLEELDLSN 259
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
620-881 3.06e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 76.90  E-value: 3.06e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  620 DELQYSPNIEKIDLKGCLELQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLTr 699
Cdd:COG4886     18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLT- 96

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  700 KLENVSSSNQDHRKQVLKLK----DSSHLGSLPD-IVIFESLEVLDFSGC--SEL-EDIQGFPqNLKRLYLAKTAIKEVP 771
Cdd:COG4886     97 NLTELDLSGNEELSNLTNLEsldlSGNQLTDLPEeLANLTNLKELDLSNNqlTDLpEPLGNLT-NLKSLDLSNNQLTDLP 175

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  772 SSLChHISKLVKLDMENCeRLRDLPMGMSNMKYLAVLKLSGCsnleNIKELP------RNLKELYLAGTAVKEFPStlLE 845
Cdd:COG4886    176 EELG-NLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGN----QLTDLPeplanlTNLETLDLSNNQLTDLPE--LG 247

                          250       260       270
                   ....*....|....*....|....*....|....*.
gi 1039018506  846 TLSEVVLLDLENCkKLQGLPTGmSKLEFLVMLKLSG 881
Cdd:COG4886    248 NLTNLEELDLSNN-QLTDLPPL-ANLTNLKTLDLSN 281
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
590-857 6.81e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.74  E-value: 6.81e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  590 SKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELqsfpdtGQLQHLRIVDLSTCKkIKSFPKV- 668
Cdd:COG4886     60 LLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSGNQ-LTDLPEEl 132

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  669 --PPSIRKLHLQGTGIRDL-SSLnhssesQRLTrKLENVS-SSNQdhrkqvlkLKD-SSHLGSLPdivifeSLEVLDFSG 743
Cdd:COG4886    133 anLTNLKELDLSNNQLTDLpEPL------GNLT-NLKSLDlSNNQ--------LTDlPEELGNLT------NLKELDLSN 191

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  744 CsELEDIQ---GFPQNLKRLYLAKTAIKEVPSSLcHHISKLVKLDMENCeRLRDLPmGMSNMKYLAVLKLSGC--SNLEN 818
Cdd:COG4886    192 N-QITDLPeplGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNN-QLTDLP-ELGNLTNLEELDLSNNqlTDLPP 267

                          250       260       270
                   ....*....|....*....|....*....|....*....
gi 1039018506  819 IKELPrNLKELYLAGTAVKEFPSTLLETLSEVVLLDLEN 857
Cdd:COG4886    268 LANLT-NLKTLDLSNNQLTDLKLKELELLLGLNSLLLLL 305
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
716-1062 8.06e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 75.36  E-value: 8.06e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  716 LKLKDSSHLGSLPDIVIFESLEVLDFSGCSELEDIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLV-KLDMENCERLRD 794
Cdd:COG4886      8 LTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLlLLSLLLLSLLLL 87

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  795 LPMGMSNMKYLAVLKLSGCSNLENIKelprNLKELYLAGTAVKEFPSTLlETLSEVVLLDLENCKkLQGLPTGMSKLEFL 874
Cdd:COG4886     88 GLTDLGDLTNLTELDLSGNEELSNLT----NLESLDLSGNQLTDLPEEL-ANLTNLKELDLSNNQ-LTDLPEPLGNLTNL 161

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  875 VMLKLSGCSkleiIVDLPL------NLIELYLAGTAIRELPPSIGDLalldtldlKN-------CNRLRHLPMEMHNLNP 941
Cdd:COG4886    162 KSLDLSNNQ----LTDLPEelgnltNLKELDLSNNQITDLPEPLGNL--------TNleeldlsGNQLTDLPEPLANLTN 229

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  942 LKVLDLSNCsELevftSSLPKVRELrpaptvmllrSKLpfcffifyehrVTLSLYKARLQYIPEEIRwMPSLKTLDLSRN 1021
Cdd:COG4886    230 LETLDLSNN-QL----TDLPELGNL----------TNL-----------EELDLSNNQLTDLPPLAN-LTNLKTLDLSNN 282

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|.
gi 1039018506 1022 GFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNA 1062
Cdd:COG4886    283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTL 323
NB-ARC pfam00931
NB-ARC domain;
152-403 1.60e-11

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 66.25  E-value: 1.60e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  152 VEKIVADVRQKLDRRGRIGVysrltkieyllckqpgciirsLGIWGMAGIGKTTLARAAY---DQLSRDFE--ASCFI-- 224
Cdd:pfam00931    1 REDMVEKVIGKLSEKDEPGI---------------------VGIHGMGGVGKTTLAAQIFndfDEVEGHFDsvAWVVVsk 59

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  225 -----EDFDREFQEkgfFGLLEKQLGVNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGPGSLIIVTSQ 299
Cdd:pfam00931   60 tftisTLQQTILQN---LGLSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTR 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  300 DKQVL--VQCQvNEIYKVQGLNKHESLQLFSRCAFGKDV-PDQNLLELSMKFVDYANGNPLALSICGKNLKGK-TPLDMK 375
Cdd:pfam00931  137 SEEVAgrVGGP-SDPHEVELLEPDEAWELFENKVFPKTLgECELLEDVAKEIVEKCRGLPLALKVLGGLLSCKkTVEEWK 215

                          250       260
                   ....*....|....*....|....*....
gi 1039018506  376 SVVLELKRHLsdKIFVK-LKSSYDALSVS 403
Cdd:pfam00931  216 HVYDVLQSEL--KSNSYsLNSVRSILQLS 242
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 7-100 1.54e-08

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 54.24  E-value: 1.54e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506    7 VYISFNrWEDtirHSFVSHLSAEFQRKGVSVFA-SEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEfLKVS 85
Cdd:pfam13676    1 VFISYA-GED---RAWAEWLADALEAAGYRVWLdRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAE-WEAA 75

                           90
                   ....*....|....*
gi 1039018506   86 KCRRSKGLVVVPVFY 100
Cdd:pfam13676   76 LADPEGRKRLIPVRL 90
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1294-1380 3.44e-08

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.44e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210   418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                   ....*...
gi 1039018506 1373 FSREIIHM 1380
Cdd:PLN03210   497 MGKEIVRA 504
PLN03194 PLN03194
putative disease resistance protein; Provisional
 1390-1535 6.08e-08

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 54.44  E-value: 6.08e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1390 SMASGSPCnrnnDVFVSFHGKDFRKQFISDFLKKLVYKGIRICI-------GDKILSRslINKVIKESSIAVVVFSENYA 1462
Cdd:PLN03194    20 SSSSAKPC----DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLdnknmkpGDKLFDK--INSAIRNCKVGVAVFSPRYC 93

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039018506 1463 SSSLCLLQLMEIMkcweELGQVVMPIFYKVNPSDIRNQSghfgkgfKKTCKktiNDERQRWSRALTDAASIAG 1535
Cdd:PLN03194    94 ESYFCLHELALIM----ESKKRVIPIFCDVKPSQLRVVD-------NGTCP---DEEIRRFNWALEEAKYTVG 152
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
577-769 2.99e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 54.55  E-value: 2.99e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  577 FGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLS-CSVQLLNvDELQYSPNIEKIDLKGClELQSFPDT-GQLQHLRIV 654
Cdd:COG4886    110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSnNQLTDLP-EPLGNLTNLKSLDLSNN-QLTDLPEElGNLTNLKEL 187

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  655 DLSTCkKIKSFPKV---PPSIRKLHLQGTGIRDLsslnhSSESQRLTrKLENVS-SSNQdhrkqvlklkdsshLGSLPDI 730
Cdd:COG4886    188 DLSNN-QITDLPEPlgnLTNLEELDLSGNQLTDL-----PEPLANLT-NLETLDlSNNQ--------------LTDLPEL 246

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1039018506  731 VIFESLEVLDFSGCsELEDI--QGFPQNLKRLYLAKTAIKE 769
Cdd:COG4886    247 GNLTNLEELDLSNN-QLTDLppLANLTNLKTLDLSNNQLTD 286
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 581-600 4.48e-06

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 44.25  E-value: 4.48e-06
                           10        20
                   ....*....|....*....|
gi 1039018506  581 YLVELNMPCSKLKKLWGGTK 600
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 1403-1496 7.83e-06

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 46.54  E-value: 7.83e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506 1403 VFVSFHGKDfrKQFISDFLKKLVYKGIR-------ICIGDKILSRslINKVIKESSIAVVVFSENYASSSLCLLQLMEIM 1475
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRvwldrwdIRPGDDWVEE--IEEAIENSDRVLVVLSPNYLESPWCRAEWEAAL 76

                           90       100
                   ....*....|....*....|.
gi 1039018506 1476 KCwEELGQVVMPIFYKVNPSD 1496
Cdd:pfam13676   77 AD-PEGRKRLIPVRLECDLEL 96
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
195-498 1.98e-04

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 46.34  E-value: 1.98e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  195 IWGMAGIGKTTLARAAYDQLSRDFEASC-----FIE--DFDREFQekgFFGLLEKQLGVNPQVTRlSILLKTLRSKRILL 267
Cdd:COG5635    185 ILGEPGSGKTTLLRYLALELAERYLDAEdpipiLIElrDLAEEAS---LEDLLAEALEKRGGEPE-DALERLLRNGRLLL 260

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  268 VLD------------DVRKPLgaTSFLCEFdwlgPGSLIIVTS----QDKQVLVQCQVneiYKVQGLNKHESLQLFSRC- 330
Cdd:COG5635    261 LLDgldevpdeadrdEVLNQL--RRFLERY----PKARVIITSrpegYDSSELEGFEV---LELAPLSDEQIEEFLKKWf 331

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  331 --------AFGKDVPD-QNLLELSmkfvdyanGNPLALSICGKNLKGKTPL-DMKSVVLE--LKRHLSDKIFVKLKSSYD 398
Cdd:COG5635    332 eaterkaeRLLEALEEnPELRELA--------RNPLLLTLLALLLRERGELpDTRAELYEqfVELLLERWDEQRGLTIYR 403

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  399 ALSVSEKEIFL-DIVFtfrganvdnVMQSlAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLIYDVGLkiINDQSDEIgm 477
Cdd:COG5635    404 ELSREELRELLsELAL---------AMQE-NGRTEFAREELEEILREYLGRRKDAEALLDELLLRTGL--LVERGEGR-- 469

                          330       340
                   ....*....|....*....|.
gi 1039018506  478 cYRFVdasnsqslieHKEIRE 498
Cdd:COG5635    470 -YSFA----------HRSFQE 479
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 558-826 5.75e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 41.37  E-value: 5.75e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  558 PELRLLHWTCYPLHSFPQNFGFQYLVEL-NMPCSKLKKLW------------GGTKNLEVLKRITLSCSVQLlnVDELQY 624
Cdd:PLN00113   301 PELVIQLQNLEILHLFSNNFTGKIPVALtSLPRLQVLQLWsnkfsgeipknlGKHNNLTVLDLSTNNLTGEI--PEGLCS 378

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  625 SPNIEKIDL-KGCLELQSFPDTGQLQHLRIVDLSTckkiKSFP-KVPPSIRKLHLqgTGIRDLSSLNHSSESQrlTRKLE 702
Cdd:PLN00113   379 SGNLFKLILfSNSLEGEIPKSLGACRSLRRVRLQD----NSFSgELPSEFTKLPL--VYFLDISNNNLQGRIN--SRKWD 450

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039018506  703 NVSSsnqdhrkQVLKLKDSSHLGSLPDIVIFESLEVLD-----FSGCSELEdIQGFPQnLKRLYLAKTAIK-EVPSSLcH 776
Cdd:PLN00113   451 MPSL-------QMLSLARNKFFGGLPDSFGSKRLENLDlsrnqFSGAVPRK-LGSLSE-LMQLKLSENKLSgEIPDEL-S 520

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|
gi 1039018506  777 HISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSgCSNLENikELPRNL 826
Cdd:PLN00113   521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLS-QNQLSG--EIPKNL 567
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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