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Conserved domains on  [gi|1039015555|gb|ANM65094|]
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receptor like protein 39 [Arabidopsis thaliana]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 181-843 2.81e-62

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.81e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 181 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 254
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 255 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 333
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 334 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 413
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 414 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 492
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 493 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 569
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 570 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 649
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 650 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 729
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 730 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 809
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1039015555 810 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 843
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN03150 super family cl31977
hypothetical protein; Provisional
 116-195 8.69e-05

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PLN03150:

Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 116 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 195
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 181-843 2.81e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.81e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 181 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 254
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 255 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 333
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 334 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 413
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 414 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 492
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 493 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 569
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 570 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 649
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 650 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 729
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 730 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 809
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1039015555 810 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 843
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
111-440 1.84e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 107.33  E-value: 1.84e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 111 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 190
Cdd:COG4886    94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 191 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 270
Cdd:COG4886   171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 271 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 350
Cdd:COG4886   244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 351 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 430
Cdd:COG4886   323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                         330
                  ....*....|
gi 1039015555 431 KHCNISVFPN 440
Cdd:COG4886   403 LTLALLDAVN 412
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 128-313 7.47e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 7.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 128 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 207
Cdd:cd21340    22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 208 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 260
Cdd:cd21340    74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1039015555 261 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 313
Cdd:cd21340   150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PLN03150 PLN03150
hypothetical protein; Provisional
 116-195 8.69e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 116 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 195
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
LRR_8 pfam13855
Leucine rich repeat;
202-265 2.17e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.20  E-value: 2.17e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039015555 202 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 265
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 181-843 2.81e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.81e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 181 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 254
Cdd:PLN00113   21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 255 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 333
Cdd:PLN00113   95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 334 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 413
Cdd:PLN00113  174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 414 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 492
Cdd:PLN00113  238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 493 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 569
Cdd:PLN00113  306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 570 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 649
Cdd:PLN00113  365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 650 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 729
Cdd:PLN00113  445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 730 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 809
Cdd:PLN00113  496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                         650       660       670
                  ....*....|....*....|....*....|....
gi 1039015555 810 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 843
Cdd:PLN00113  576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 119-628 2.15e-35

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 145.38  E-value: 2.15e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 119 TLKSN-------SSLFQFHQLRHLYLSYNNFTpSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNEL 191
Cdd:PLN00113  194 TLASNqlvgqipRELGQMKSLKWIYLGYNNLS-GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 192 TGSLsfvrnlrkltildvshnhfsgtlnPNsSLFELHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPP 271
Cdd:PLN00113  273 SGPI------------------------PP-SIFSLQKLISLDL-SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPV 326

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 272 TISNLTQLTELYLPLNDFTGSLPlvQNLTK---LSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGsiEVPNS-SL 347
Cdd:PLN00113  327 ALTSLPRLQVLQLWSNKFSGEIP--KNLGKhnnLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG--EIPKSlGA 402

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 348 SSRLENLNLGENHFEGKIIEPISKlinlkelhlsflntsypinlklfsslkylllldlsggwisqaslsldsyipstlea 427
Cdd:PLN00113  403 CRSLRRVRLQDNSFSGELPSEFTK-------------------------------------------------------- 426

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 428 lllkhcnisvfpnilktLPNLEFIALSTNKISGKIPEWLWSLPrlssvfieenlftgfegsseilvnsSVRILNLLSNNL 507
Cdd:PLN00113  427 -----------------LPLVYFLDISNNNLQGRINSRKWDMP-------------------------SLQMLSLARNKF 464

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 508 EGALPHLPLSVNY--FSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPCPS---NFLILNLRKNNLEGSIPDTYY 582
Cdd:PLN00113  465 FGGLPDSFGSKRLenLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSsckKLVSLDLSHNQLSGQIPASFS 544

                         490       500       510       520
                  ....*....|....*....|....*....|....*....|....*.
gi 1039015555 583 ADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFS 628
Cdd:PLN00113  545 EMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
111-440 1.84e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 107.33  E-value: 1.84e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 111 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 190
Cdd:COG4886    94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 191 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 270
Cdd:COG4886   171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 271 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 350
Cdd:COG4886   244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 351 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 430
Cdd:COG4886   323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                         330
                  ....*....|
gi 1039015555 431 KHCNISVFPN 440
Cdd:COG4886   403 LTLALLDAVN 412
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
137-485 2.78e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.62  E-value: 2.78e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 137 LSYNNFTPSSIPSEFGMLNKLEVLFMSTggflgqvPSSFSNLSMLSALLLHHNELTGSLSFVRNLRKLTILDVSHNHFSg 216
Cdd:COG4886    78 SLLLLSLLLLGLTDLGDLTNLTELDLSG-------NEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT- 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 217 tlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfGQVPPTISNLTQLTELYLPLNDFTgSLPL- 295
Cdd:COG4886   150 --DLPEPLGNLTNLKSLDLSNNQLTD--LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEp 223

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 296 VQNLTKLSILHLSDNHFSgTIPSsLFTMPFLSYLDLGGNNLSgsiEVPNSSLSSRLENLNLGENHFEGKIIEPISKLINL 375
Cdd:COG4886   224 LANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT---DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGL 298

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 376 KELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLLKHCNISVFPNILKTLPNLEFIALST 455
Cdd:COG4886   299 NSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEAT 378

                         330       340       350
                  ....*....|....*....|....*....|
gi 1039015555 456 NKISGKIPEWLWSLPRLSSVFIEENLFTGF 485
Cdd:COG4886   379 LLTLALLLLTLLLLLLTTTAGVLLLTLALL 408
PLN03150 PLN03150
hypothetical protein; Provisional
 745-850 3.55e-18

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.49  E-value: 3.55e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 745 LEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAYMNVSHNQLNGEIPQ- 823
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAa 509

                          90       100
                  ....*....|....*....|....*...
gi 1039015555 824 -GTQITGQPKSSFEGNAGLCGLPLQESC 850
Cdd:PLN03150  510 lGGRLLHRASFNFTDNAGLCGIPGLRAC 537
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
480-876 6.49e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.26  E-value: 6.49e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 480 NLFTGFEGSSEILVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIppc 559
Cdd:COG4886    36 ALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--- 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 560 pSNFLILNLRKNNLEgSIPDTYYADAPLRSLDVGYNRLTgKLPRSLLNCSALQFLSVDHNGIKDtFPFSLKALPKLQVLI 639
Cdd:COG4886   113 -TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELD 188

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 640 LHSNNFY---GPLSppnqgslGFPELRILEIAGNKFTgSLPPDFFEnwkassltmnedqglymvynkvvygtyyFTSLEA 716
Cdd:COG4886   189 LSNNQITdlpEPLG-------NLTNLEELDLSGNQLT-DLPEPLAN----------------------------LTNLET 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 717 IDLqykglsmeqnrvlsssatidfSGNRLEgEIPEsIGLLKALIALNLSNNAFTgHIPlSLANLKKIESLDLSSNQLSGT 796
Cdd:COG4886   233 LDL---------------------SNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLP-PLANLTNLKTLDLSNNQLTDL 287

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 797 IPNGIGTLSFLAYMNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCGLPLQESCFGTNAPPAQHPKEEEEEEEEEEQVLN 876
Cdd:COG4886   288 KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
PLN03150 PLN03150
hypothetical protein; Provisional
 245-320 3.36e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.60  E-value: 3.36e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1039015555 245 LPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP-LVQNLTKLSILHLSDNHFSGTIPSSL 320
Cdd:PLN03150  434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPeSLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 258-351 1.25e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 1.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 258 LDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPL-VQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNL 336
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                          90
                  ....*....|....*
gi 1039015555 337 SGsiEVPnSSLSSRL 351
Cdd:PLN03150  503 SG--RVP-AALGGRL 514
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
229-684 2.01e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 54.55  E-value: 2.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 229 NLAYLDLGSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPLVQNLTKLSILHLS 308
Cdd:COG4886     2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 309 DNHFSGTiPSSLFTMPFLSYLDLGGNNLSGSIevpnsslsSRLENLNLGENHFEgKIIEPISKLINLKELHLSFLNtsyp 388
Cdd:COG4886    82 LSLLLLG-LTDLGDLTNLTELDLSGNEELSNL--------TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQ---- 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 389 inlklfsslkylllldlsggwISQASLSLDSYipSTLEALLLKHCNISVFPNILKTLPNLEFIALSTNKISgKIPEWLWS 468
Cdd:COG4886   148 ---------------------LTDLPEPLGNL--TNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGN 203

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 469 LPRLSSVFIEENLFTGFegSSEILVNSSVRILNLLSNNLEgalphlplsvnyfsarnnryggDIPlSICSRRSLVFLDLS 548
Cdd:COG4886   204 LTNLEELDLSGNQLTDL--PEPLANLTNLETLDLSNNQLT----------------------DLP-ELGNLTNLEELDLS 258

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 549 YNNFTGpIPPCP--SNFLILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFP 626
Cdd:COG4886   259 NNQLTD-LPPLAnlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTL 337

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1039015555 627 FSLKALPKLQVLILHSNNFYGPLSPPNQGSLGFPELRILEIAGNKFTGSLPPDFFENW 684
Cdd:COG4886   338 TTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLT 395
PLN03150 PLN03150
hypothetical protein; Provisional
 227-294 1.03e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.51  E-value: 1.03e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039015555 227 LHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP 294
Cdd:PLN03150  441 LRHLQSINL-SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 566-663 1.73e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.74  E-value: 1.73e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 566 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPklqvliLH--SN 643
Cdd:PLN03150  447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL------LHraSF 520

                          90       100
                  ....*....|....*....|
gi 1039015555 644 NFygplsPPNQGSLGFPELR 663
Cdd:PLN03150  521 NF-----TDNAGLCGIPGLR 535
PLN03150 PLN03150
hypothetical protein; Provisional
 566-647 5.72e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.20  E-value: 5.72e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 566 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNF 645
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                  ..
gi 1039015555 646 YG 647
Cdd:PLN03150  503 SG 504
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 128-313 7.47e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 7.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 128 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 207
Cdd:cd21340    22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 208 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 260
Cdd:cd21340    74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1039015555 261 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 313
Cdd:cd21340   150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PLN03150 PLN03150
hypothetical protein; Provisional
 500-578 9.01e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.43  E-value: 9.01e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 500 LNLLSNNLEGALP-------HLPlSVNYfsaRNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPCP---SNFLILNLR 569
Cdd:PLN03150  423 LGLDNQGLRGFIPndisklrHLQ-SINL---SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLgqlTSLRILNLN 498


                  ....*....
gi 1039015555 570 KNNLEGSIP 578
Cdd:PLN03150  499 GNSLSGRVP 507
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
416-645 9.17e-06

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 49.70  E-value: 9.17e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 416 SLDSYIPSTLEALLLKHCNISVFPNILK------------------TLPN-LEFIALSTNKISgKIPEWLWSlpRLSSVF 476
Cdd:PRK15370  192 TIPACIPEQITTLILDNNELKSLPENLQgniktlyansnqltsipaTLPDtIQEMELSINRIT-ELPERLPS--ALQSLD 268

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 477 IEENLFTGFEGSseilVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYG---GDIPLSIcsrRSLVFLDLSYNNFT 553
Cdd:PRK15370  269 LFHNKISCLPEN----LPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpETLPPGL---KTLEAGENALTSLP 341

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 554 GPIPPCPSNFLILNLRKNNLEGSIPDTyyadapLRSLDVGYNRLTgKLPRSLlnCSALQFLSVDHNG---IKDTFPFSLK 630
Cdd:PRK15370  342 ASLPPELQVLDVSKNQITVLPETLPPT------ITTLDVSRNALT-NLPENL--PAALQIMQASRNNlvrLPESLPHFRG 412

                         250
                  ....*....|....*
gi 1039015555 631 ALPKLQVLILHSNNF 645
Cdd:PRK15370  413 EGPQPTRIIVEYNPF 427
PLN03150 PLN03150
hypothetical protein; Provisional
 116-195 8.69e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 116 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 195
Cdd:PLN03150  430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
PLN03150 PLN03150
hypothetical protein; Provisional
 732-777 2.12e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.19  E-value: 2.12e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1039015555 732 LSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSL 777
Cdd:PLN03150  465 ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
LRR_8 pfam13855
Leucine rich repeat;
202-265 2.17e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.20  E-value: 2.17e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039015555 202 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 265
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 166-250 2.38e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.81  E-value: 2.38e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 166 GFLGQVPSSFSNLSMLSALLLHHNELTGSLSF-VRNLRKLTILDVSHNHFSGTLnpNSSLFELHNLAYLDLgSNNFTSSS 244
Cdd:PLN03150  429 GLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSI--PESLGQLTSLRILNL-NGNSLSGR 505


                  ....*.
gi 1039015555 245 LPYEFG 250
Cdd:PLN03150  506 VPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 437-512 8.97e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 8.97e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039015555 437 VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGFEGSSEILVnSSVRILNLLSNNLEGALP 512
Cdd:PLN03150  433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL-TSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 597-677 1.16e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.50  E-value: 1.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039015555 597 LTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPLsPPNQGSLgfPELRILEIAGNKFTGSL 676
Cdd:PLN03150  430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI-PESLGQL--TSLRILNLNGNSLSGRV 506


                  .
gi 1039015555 677 P 677
Cdd:PLN03150  507 P 507
PLN03150 PLN03150
hypothetical protein; Provisional
 305-380 2.52e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 41.73  E-value: 2.52e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039015555 305 LHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHL 380
Cdd:PLN03150  423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITS-LEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
LRR_8 pfam13855
Leucine rich repeat;
737-793 3.28e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.73  E-value: 3.28e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1039015555 737 TIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQL 793
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
565-621 6.22e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.96  E-value: 6.22e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1039015555 565 ILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGI 621
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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