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Conserved domains on  [gi|1039011435|gb|ANM61304|]
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Tubulin/FtsZ family protein [Arabidopsis thaliana]

Protein Classification

cell division protein FtsZ( domain architecture ID 11415192)

cell division protein FtsZ assembles into a Z ring that provides the framework for the cell division apparatus

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206    10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206    88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206   248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1039011435 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206   326 -----------ETERPLEETEPAEDLDIPAFLR 347
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206    10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206    88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206   248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1039011435 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206   326 -----------ETERPLEETEPAEDLDIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
119-423 3.73e-147

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 422.19  E-value: 3.73e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 119 ARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:cd02201     1 AKIKVIGVGGGGGNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 199 EEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:cd02201    79 KEALKGADMVFItagmgggtgTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPL 358
Cdd:cd02201   159 LEIVGKNLPLLEAFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPL 238
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039011435 359 LDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATG 423
Cdd:cd02201   239 LEDDIKGAKGVLVNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
115-431 1.81e-123

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 363.94  E-value: 1.81e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 115 NYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARES 194
Cdd:TIGR00065  14 PSNKAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEES 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 195 KEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIP 274
Cdd:TIGR00065  92 RDEIRKLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 275 NDKLLTAVSQsTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---SRARDAAL 351
Cdd:TIGR00065 172 NDKLLEVVPN-LPLNDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVR 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 352 NAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEG 430
Cdd:TIGR00065 251 KALSSPLLDvDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFF 330

                  .
gi 1039011435 431 E 431
Cdd:TIGR00065 331 G 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
105-428 1.61e-120

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 357.40  E-value: 1.61e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 105 EDFEEPSAPSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNP 184
Cdd:PRK13018   15 EKEEKKASDDDFGNPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 185 EIGMNAARESKEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLR 264
Cdd:PRK13018   93 EVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLR 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 265 DNVDTLIVIPNDKLLTAVsQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS 344
Cdd:PRK13018  173 EAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQN 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 345 RARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGF 424
Cdd:PRK13018  252 RAMEAVRAALANPLLDVDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGV 331

                  ....
gi 1039011435 425 KRQE 428
Cdd:PRK13018  332 KSAQ 335
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
120-314 5.51e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 5.51e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435  120 RIKVIGVGGGGSNAVNRMIESemSGVEFWIVNTDIQAMRM-SPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEP--GVIDGVRANTDAQALNPeSLA--SGKIQAGNNWTRGLGAGADPEVGREAAEESLDEI 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435  199 EEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:smart00864  77 REELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDAL 156
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1039011435  279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPG 314
Cdd:smart00864 157 LDICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
331-425 1.54e-33

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 331 GSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPA 410
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 1039011435 411 LSGQVSITLIATGFK 425
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
117-468 2.52e-158

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 452.26  E-value: 2.52e-158
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 117 NEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKE 196
Cdd:COG0206    10 LKAKIKVIGVGGGGGNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESRE 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 197 VIEEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276
Cdd:COG0206    88 EIREALEGADMVFItagmgggtgTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPND 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQS 356
Cdd:COG0206   168 KLLEVADKNTPLLEAFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 357 PLLDIG-IERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRtv 435
Cdd:COG0206   248 PLLEDVsISGAKGVLVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFDSEAIVGEE-- 325
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1039011435 436 qmvqadaasvgATRRPSSSFRESGSVEIPEFLK 468
Cdd:COG0206   326 -----------ETERPLEETEPAEDLDIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
119-423 3.73e-147

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 422.19  E-value: 3.73e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 119 ARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:cd02201     1 AKIKVIGVGGGGGNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 199 EEALYGSDMVFVtagmgggtgTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:cd02201    79 KEALKGADMVFItagmgggtgTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPL 358
Cdd:cd02201   159 LEIVGKNLPLLEAFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPL 238
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039011435 359 LDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATG 423
Cdd:cd02201   239 LEDDIKGAKGVLVNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
115-431 1.81e-123

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 363.94  E-value: 1.81e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 115 NYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARES 194
Cdd:TIGR00065  14 PSNKAKIKVIGVGGGGNNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEES 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 195 KEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIP 274
Cdd:TIGR00065  92 RDEIRKLLEGADMVFITAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIP 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 275 NDKLLTAVSQsTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---SRARDAAL 351
Cdd:TIGR00065 172 NDKLLEVVPN-LPLNDAFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVR 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 352 NAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGFKRQEEG 430
Cdd:TIGR00065 251 KALSSPLLDvDKISGAKGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFF 330

                  .
gi 1039011435 431 E 431
Cdd:TIGR00065 331 G 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
105-428 1.61e-120

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 357.40  E-value: 1.61e-120
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 105 EDFEEPSAPSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNP 184
Cdd:PRK13018   15 EKEEKKASDDDFGNPKIVVVGCGGAGNNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 185 EIGMNAARESKEVIEEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLR 264
Cdd:PRK13018   93 EVGRKAAEESRDEIKEVLKGADLVFVTAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLR 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 265 DNVDTLIVIPNDKLLTAVsQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS 344
Cdd:PRK13018  173 EAADTVIVIDNNRLLDIV-PNLPIADAFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQN 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 345 RARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPALSGQVSITLIATGF 424
Cdd:PRK13018  252 RAMEAVRAALANPLLDVDYRGAKGALVHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGV 331

                  ....
gi 1039011435 425 KRQE 428
Cdd:PRK13018  332 KSAQ 335
FtsZ_CetZ-like cd02191
Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is ...
119-423 5.83e-64

Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. CetZ-like proteins are related to tubulin and FtsZ and co-exists with FtsZ in many archaea. However, a recent study found that Cetz proteins (formerly annotated FtsZ type 2) are not required for cell division. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276960 [Multi-domain]  Cd Length: 308  Bit Score: 209.34  E-value: 5.83e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 119 ARIKVIGVGGGGSNAVNRM----IE-SEMSGVEFWIVNTDIQAMRMSPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARE 193
Cdd:cd02191     1 AKIVVIGVGQAGGNLASALqsfdREtGFGAGVETVAINTAAQDLKSLKA--KETLLIGQDRTNGHGVGGNPELGAQAAEE 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 194 SKEVIEEALYG---SDMVFVTAGMGGGTGTGAAPVIAGIAKAMGI-LTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDT 269
Cdd:cd02191    79 DQEEIMEALEGrveADMIFVTTGLGGGTGSGGAPVLAEALKKVYDvLTVAVVTLPFADEGALYMQNAGEGLRTLAEEADA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 270 LIVIPNDKLLTAVSqstPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKS-RARD 348
Cdd:cd02191   159 LILVDNEKLRSIGG---SLSEAYDAINEVLARRVGGLLEAIEATGLSVVDFADVKTVMNSGGMAMLGYGSADASInRARE 235
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039011435 349 AALNAIQSPLLDIGIERATGIVWNITGGSD-LTLFEVNAAAEVIYDLVDpTANLIFGAVVDPalSGQVSITLIATG 423
Cdd:cd02191   236 ATRRALRTPLLLPDASGADGALVVIAGEPDtLPLKEVERVRRWVEDETG-SATVRGGDVIDE--SGRLRVLVVLTG 308
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
120-314 5.51e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 5.51e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435  120 RIKVIGVGGGGSNAVNRMIESemSGVEFWIVNTDIQAMRM-SPVlpDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVI 198
Cdd:smart00864   1 KIKVFGVGGGGPNAVNVDLEP--GVIDGVRANTDAQALNPeSLA--SGKIQAGNNWTRGLGAGADPEVGREAAEESLDEI 76
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435  199 EEALYGSDMVFVTAGMGGGTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKL 278
Cdd:smart00864  77 REELEGADGVFITAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDAL 156
                          170       180       190
                   ....*....|....*....|....*....|....*.
gi 1039011435  279 LTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPG 314
Cdd:smart00864 157 LDICGRKLPLRPAFKDANDLLAQAVSGITDLIRFPG 192
Tubulin_C smart00865
Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and ...
316-426 1.02e-37

Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.


Pssm-ID: 214868 [Multi-domain]  Cd Length: 120  Bit Score: 133.83  E-value: 1.02e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435  316 VNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDL 394
Cdd:smart00865   1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEdSNIMGAKGVLVNITGGPDLTLKEVNEAMERIREK 80
                           90       100       110
                   ....*....|....*....|....*....|...
gi 1039011435  395 VDPTANLIFGAVVDPALSG-QVSITLIATGFKR 426
Cdd:smart00865  81 ADPDAFIIWGPVIDEELGGdEIRVTVIATGIGS 113
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
331-425 1.54e-33

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 331 GSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPA 410
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 1039011435 411 LSGQVSITLIATGFK 425
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
131-279 3.94e-26

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 104.61  E-value: 3.94e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 131 SNAVNRMIE---------------SEMSGVEFW----IVNTDIQAMRMSPV-LPDNRLQIGKELTRGLGAGGNPEIGMNA 190
Cdd:pfam00091  12 NNIGNALWEllclehgidslnvffSESGSVEFIprslAIDTDPQALNEIKAgFNPNKILLGKEGTGGNGAGGYPEIGREA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 191 ARESKEVIEEALYGSDM---VFVTAGMGGGTGTGAAPVIAGIAKAM--GILTVGIATTPFSF-EGRRRTVQAQEGLASLR 264
Cdd:pfam00091  92 AEESLEEIRKEVEGCDMlqgFFITASLGGGTGSGAAPVIAEILKELypGALTVAVVTFPFGFsEGVVRPYNAILGLKELI 171
                         170
                  ....*....|....*
gi 1039011435 265 DNVDTLIVIPNDKLL 279
Cdd:pfam00091 172 EHSDSVIVIDNDALY 186
Tubulin_FtsZ_Cetz-like cd00286
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
144-423 5.02e-14

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276954 [Multi-domain]  Cd Length: 332  Bit Score: 72.83  E-value: 5.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 144 GVEFW----IVNT---DIQAMRMSPVL----PDNRLQIGKeltrGLGAGGNPEIGMNAA-RESKEVIEEAL-------YG 204
Cdd:cd00286    15 GAAFWeqavLVDLepaVLDELLSGPLRqlfhPENIILIQK----YHGAGNNWAKGHSVAgEEYQEEILDAIrkeveecDE 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 205 SDMVFVTAGMGGGTGTGAAPVIAGIAKAM--GILTVGIATTPFSFEGRR-RTVQAQEGLASLRDNVDTLIVIPNDKLLTA 281
Cdd:cd00286    91 LQGFFITHSLGGGTGSGLGPLLAERLKDEypNRLVVTFSILPGPDEGVIvYPYNAALTLKTLTEHADCLLLVDNEALYDI 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 282 VSQST-PVTEAFNLADDILRQGVRGISDIITIPGLVNVDF---ADVRAIMANAGSSLMGIGTATGKS-------RARDAA 350
Cdd:cd00286   171 CPRPLhIDAPAYDHINELVAQRLGSLTEALRFEGSLNVDLrelAENLVPLPRGHFLMLGYAPLDSATsatprslRVKELT 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 351 LNAIQSPLLDIG----IERATGIVWNITGGSDLTLFEVNAAAEVIYD-----LVDPTANLIFGAVVDPALSGQVSITLIA 421
Cdd:cd00286   251 RRAFLPANLLVGcdpdHGEAIAALLVIRGPPDLSSKEVERAIARVKEtlghlFSWSPAGVKTGISPKPPAEGEVSVLALL 330

                  ..
gi 1039011435 422 TG 423
Cdd:cd00286   331 NS 332
CetZ_tubulin-like cd02202
Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct ...
150-341 2.47e-09

Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276962 [Multi-domain]  Cd Length: 357  Bit Score: 58.79  E-value: 2.47e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 150 VNTDIQA-MRMSPVLPDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVIEEAL-----YGSDMVFVTAGMGGGTGTGAA 223
Cdd:cd02202    37 VNTDRADlSGLDHIPEERRILIGDTETGGHGVGGDNELGAEVAEEDIDELLRALdtapfSEADAFLVVAGLGGGTGSGAA 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039011435 224 PVIAGIAKAMGILTV-GIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPNDKLLTAvsqSTPVTEAFNLADDILRQG 302
Cdd:cd02202   117 PVLAEELKERYDKPVyALGVLPAAEEGGRYALNAARSLRSLVELADAVILFDNDAWRRS---GESIAEAYDRINEEIAER 193
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1039011435 303 VR-----GISDIITIPGLVNVDFADVRAIMANAGssLMGIGTAT 341
Cdd:cd02202   194 LGallaaGEVDAPKSVGESVLDASDIINTLSGGG--VATIGYAS 235
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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