DELLA protein RGL1 [Hevea brasiliensis subsp. brasiliensis]
Protein Classification
GRAS family protein( domain architecture ID 10572318)
GRAS family protein such as Arabidopsis thaliana protein SCARECROW, a transcription factor required for quiescent center cells specification and maintenance of surrounding stem cells, and for the asymmetric cell division involved in radial pattern formation in roots
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||||
| GRAS | pfam03514 | GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in ... |
249-611 | 0e+00 | ||||||
GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in gibberellin (GA) signaling, which regulates various aspects of plant growth and development. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction. A sequence, structure and evolutionary analysis showed that the GRAS family emerged in bacteria and belongs to the Rossmann-fold, AdoMET (SAM)-dependent methyltransferase superfamily. All bacterial, and a subset of plant GRAS proteins, are predicted to be active and function as small-molecule methylases. Several plant GRAS proteins lack one or more AdoMet (SAM)-binding residues while preserving their substrate-binding residues. Although GRAS proteins are implicated to function as transcriptional factors, the above analysis suggests that they instead might either modify or bind small molecules. : Pssm-ID: 397536 Cd Length: 374 Bit Score: 526.08 E-value: 0e+00
|
||||||||||
| DELLA | pfam12041 | Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have ... |
49-115 | 4.30e-45 | ||||||
Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have great impact on growth signalling. DELLA proteins are transcriptional regulators of growth related proteins which are downregulated when gibberellins bind to their receptor GID1. GID1 forms a complex with DELLA proteins and signals them towards 26S proteasome. The N terminal of DELLA proteins contains conserved DELLA and VHYNP motifs which are important for GID1 binding and proteolysis of the DELLA proteins. : Pssm-ID: 403308 Cd Length: 68 Bit Score: 154.08 E-value: 4.30e-45
|
||||||||||
| Name | Accession | Description | Interval | E-value | ||||||
| GRAS | pfam03514 | GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in ... |
249-611 | 0e+00 | ||||||
GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in gibberellin (GA) signaling, which regulates various aspects of plant growth and development. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction. A sequence, structure and evolutionary analysis showed that the GRAS family emerged in bacteria and belongs to the Rossmann-fold, AdoMET (SAM)-dependent methyltransferase superfamily. All bacterial, and a subset of plant GRAS proteins, are predicted to be active and function as small-molecule methylases. Several plant GRAS proteins lack one or more AdoMet (SAM)-binding residues while preserving their substrate-binding residues. Although GRAS proteins are implicated to function as transcriptional factors, the above analysis suggests that they instead might either modify or bind small molecules. Pssm-ID: 397536 Cd Length: 374 Bit Score: 526.08 E-value: 0e+00
|
||||||||||
| DELLA | pfam12041 | Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have ... |
49-115 | 4.30e-45 | ||||||
Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have great impact on growth signalling. DELLA proteins are transcriptional regulators of growth related proteins which are downregulated when gibberellins bind to their receptor GID1. GID1 forms a complex with DELLA proteins and signals them towards 26S proteasome. The N terminal of DELLA proteins contains conserved DELLA and VHYNP motifs which are important for GID1 binding and proteolysis of the DELLA proteins. Pssm-ID: 403308 Cd Length: 68 Bit Score: 154.08 E-value: 4.30e-45
|
||||||||||
| Name | Accession | Description | Interval | E-value | ||||||
| GRAS | pfam03514 | GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in ... |
249-611 | 0e+00 | ||||||
GRAS domain family; Proteins in the GRAS (GAI, RGA, SCR) family are known as major players in gibberellin (GA) signaling, which regulates various aspects of plant growth and development. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction. A sequence, structure and evolutionary analysis showed that the GRAS family emerged in bacteria and belongs to the Rossmann-fold, AdoMET (SAM)-dependent methyltransferase superfamily. All bacterial, and a subset of plant GRAS proteins, are predicted to be active and function as small-molecule methylases. Several plant GRAS proteins lack one or more AdoMet (SAM)-binding residues while preserving their substrate-binding residues. Although GRAS proteins are implicated to function as transcriptional factors, the above analysis suggests that they instead might either modify or bind small molecules. Pssm-ID: 397536 Cd Length: 374 Bit Score: 526.08 E-value: 0e+00
|
||||||||||
| DELLA | pfam12041 | Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have ... |
49-115 | 4.30e-45 | ||||||
Transcriptional regulator DELLA protein N terminal; Gibberellins are plant hormones which have great impact on growth signalling. DELLA proteins are transcriptional regulators of growth related proteins which are downregulated when gibberellins bind to their receptor GID1. GID1 forms a complex with DELLA proteins and signals them towards 26S proteasome. The N terminal of DELLA proteins contains conserved DELLA and VHYNP motifs which are important for GID1 binding and proteolysis of the DELLA proteins. Pssm-ID: 403308 Cd Length: 68 Bit Score: 154.08 E-value: 4.30e-45
|
||||||||||
| Blast search parameters | ||||
|
