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Conserved domains on  [gi|917632672|gb|AIM64582|]
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Tetrahydrofolate synthase [Weissella ceti]

Protein Classification

bifunctional folylpolyglutamate synthase/dihydrofolate synthase( domain architecture ID 11416298)

bifunctional folylpolyglutamate synthase (FGPS)/dihydrofolate synthase (DHFS) functions in two distinct reactions of the de novo folate biosynthetic pathway, catalyzing the addition of a glutamate residue to dihydropteroate to form dihydrofolate and the successive additions of L-glutamate to tetrahydrofolate, leading to folylpolyglutamate derivatives

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FolC COG0285
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ...
3-422 2.34e-158

Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


:

Pssm-ID: 440054 [Multi-domain]  Cd Length: 423  Bit Score: 453.02  E-value: 2.34e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   3 ETYEQALAFIHGRHKWTKTPTFDRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFN 82
Cdd:COG0285    2 TTYQEALAYLESLHPFGIKLGLERIRALLERLGNPQRKLPVIHVAGTNGKGSTAAMLESILRAAGYRVGLYTSPHLVRFN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  83 ERIQDNNGPISDAQLLTLVQRLEPLVRAQDVAHPgfelTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKL 162
Cdd:COG0285   82 ERIRINGEPISDEELVEALEEVEPAVEEVDAGPP----TFFEVTTAAAFLYFAEAPVDVAVLEVGLGGRLDATNVI-DPL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 163 AAVITSVSYDHMHVLGDTLTEITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLYVYGQSFGMRTVDHQ-LTYV 241
Cdd:COG0285  157 VSVITSIGLDHTDFLGDTLEEIAREKAGIIKPGVPVVTGDQQPEALEVIEERAAELGAPLYRAGRDFSVEEREGAvFSYQ 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 242 IDQHKLP-VQLNLNGQYQIGNAAVAIKTVQtVAPMLGVTIADAAIQEGLRHVIWPARFETVADHPLVIVDGAHNVAGIDA 320
Cdd:COG0285  237 GPGGEYEdLPLPLLGAHQAENAALALAALE-ALRELGLPISEEAIREGLANARWPGRLEVLSRGPLVILDGAHNPAGARA 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 321 LVQTLRSSYGDKTVGIVFSALADKHFEQMLRHLLAETNlKIVVVPFtaPGSR----QAIAGLPFTH-PRLTWGDDWQTAL 395
Cdd:COG0285  316 LAETLKELFPFRKLHLVFGMLADKDIEGMLAALAPLAD-EVIVTTP--PSPRaldaEELAEAARELgLRVEVAPDVEEAL 392
                        410       420       430
                 ....*....|....*....|....*....|
gi 917632672 396 KSLQAQT---DMTVITGSLYFVSEVRQQFK 422
Cdd:COG0285  393 EAALELAdpdDLILVTGSLYLVGEVRALLG 422
 
Name Accession Description Interval E-value
FolC COG0285
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ...
3-422 2.34e-158

Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440054 [Multi-domain]  Cd Length: 423  Bit Score: 453.02  E-value: 2.34e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   3 ETYEQALAFIHGRHKWTKTPTFDRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFN 82
Cdd:COG0285    2 TTYQEALAYLESLHPFGIKLGLERIRALLERLGNPQRKLPVIHVAGTNGKGSTAAMLESILRAAGYRVGLYTSPHLVRFN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  83 ERIQDNNGPISDAQLLTLVQRLEPLVRAQDVAHPgfelTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKL 162
Cdd:COG0285   82 ERIRINGEPISDEELVEALEEVEPAVEEVDAGPP----TFFEVTTAAAFLYFAEAPVDVAVLEVGLGGRLDATNVI-DPL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 163 AAVITSVSYDHMHVLGDTLTEITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLYVYGQSFGMRTVDHQ-LTYV 241
Cdd:COG0285  157 VSVITSIGLDHTDFLGDTLEEIAREKAGIIKPGVPVVTGDQQPEALEVIEERAAELGAPLYRAGRDFSVEEREGAvFSYQ 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 242 IDQHKLP-VQLNLNGQYQIGNAAVAIKTVQtVAPMLGVTIADAAIQEGLRHVIWPARFETVADHPLVIVDGAHNVAGIDA 320
Cdd:COG0285  237 GPGGEYEdLPLPLLGAHQAENAALALAALE-ALRELGLPISEEAIREGLANARWPGRLEVLSRGPLVILDGAHNPAGARA 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 321 LVQTLRSSYGDKTVGIVFSALADKHFEQMLRHLLAETNlKIVVVPFtaPGSR----QAIAGLPFTH-PRLTWGDDWQTAL 395
Cdd:COG0285  316 LAETLKELFPFRKLHLVFGMLADKDIEGMLAALAPLAD-EVIVTTP--PSPRaldaEELAEAARELgLRVEVAPDVEEAL 392
                        410       420       430
                 ....*....|....*....|....*....|
gi 917632672 396 KSLQAQT---DMTVITGSLYFVSEVRQQFK 422
Cdd:COG0285  393 EAALELAdpdDLILVTGSLYLVGEVRALLG 422
folC TIGR01499
folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of ...
24-419 1.66e-122

folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273659 [Multi-domain]  Cd Length: 397  Bit Score: 361.22  E-value: 1.66e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   24 FDRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIQDNNGPISDAQLLTLVQR 103
Cdd:TIGR01499   1 LERMKKLLEALGNPQDLYPVIHVAGTNGKGSTCAFLESILRAAGYKVGLFTSPHLVSFNERIRINGEPISDEELAQAFEQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  104 LEPLVRAQDvahpgFELTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKLAAVITSVSYDHMHVLGDTLTE 183
Cdd:TIGR01499  81 VRPILESLS-----QQPTYFELLTLLAFLYFAQAQVDVAVLEVGLGGRLDATNVI-EPLVSVITSIGLDHTEILGDTLEE 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  184 ITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLYVYGQSFGMRTVDHQLTYVIDQH--KLPVQLNLNGQYQIGN 261
Cdd:TIGR01499 155 IAWEKAGIIKEGVPIVTGEQEPEALNVLKKKAQEKGAPLFVVGRDFNYSETDENYLSFSGANlfLEPLALSLLGDHQQEN 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  262 AAVAIKTVQTVAPmLGVTIADAAIQEGLRHVIWPARFETVA-DHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVGIVFSA 340
Cdd:TIGR01499 235 AALALAALEVLGK-QNPKLSEEAIRQGLANTIWPGRLEILSeDNPNILLDGAHNPHSAEALAEWFKKRFNGRPITLLFGA 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  341 LADKHFEQMLRHLLAETNLKIVVVPFTAPGS------RQAIAGLPFthprlTWGDDWQTALKSLQA--QTDMTVITGSLY 412
Cdd:TIGR01499 314 LADKDAAAMLAPLKPVVDKEVFVTPFDYPRAddaadlAAFAEETGK-----STVEDWREALEEALNasAEDDILVTGSLY 388

                  ....*..
gi 917632672  413 FVSEVRQ 419
Cdd:TIGR01499 389 LVGEVRK 395
PRK10846 PRK10846
bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional
25-417 5.61e-49

bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional


Pssm-ID: 182774 [Multi-domain]  Cd Length: 416  Bit Score: 171.80  E-value: 5.61e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  25 DRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIQDNNGPISDAQLLTLVQRL 104
Cdd:PRK10846  33 ERVSQVAARLDLLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYRVGVYSSPHLVRYTERVRIQGQELPESAHTASFAEI 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 105 EplvraqdVAHPGFELTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKLAAVITSVSYDHMHVLGDTLTEI 184
Cdd:PRK10846 113 E-------AARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIV-DADVAVVTSIALDHTDWLGPDRESI 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 185 TQQKADIIAPGKPVIVG--DLPQEALTVVQDIA---QKRDSD--LYVYGQSFGMRTVDHQLTyvidqhKLPVQlnlngQY 257
Cdd:PRK10846 185 GREKAGIFRAEKPAVVGepDMPSTIADVAQEKGallQRRGVDwnYSVTDHDWAFSDGDGTLE------NLPLP-----NV 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 258 QIGNAAVAIKTVQTVapmlGVTIADAAIQEGLRHVIWPARFETVADHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVGIV 337
Cdd:PRK10846 254 PLPNAATALAALRAS----GLEVSEQAIRDGIASAILPGRFQIVSESPRVILDVAHNPHAAEYLTGRLKALPKNGRVLAV 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 338 FSALADKHFEQMLRHLLAEtnlkiVVVPFTAP--GSRQAIAGLPFTHprLTWG---DD----WQTALKSLQAQtDMTVIT 408
Cdd:PRK10846 330 IGMLHDKDIAGTLACLKSV-----VDDWYCAPleGPRGATAEQLAEH--LGNGksfDSvaqaWDAAMADAKPE-DTVLVC 401

                 ....*....
gi 917632672 409 GSLYFVSEV 417
Cdd:PRK10846 402 GSFHTVAHV 410
Mur_ligase_C pfam02875
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ...
294-365 1.85e-07

Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.


Pssm-ID: 460731 [Multi-domain]  Cd Length: 87  Bit Score: 48.49  E-value: 1.85e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 917632672  294 WPARFE--TVADHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVgIVFSALADK--HFEQMLRHLLAETNLKIVVVP 365
Cdd:pfam02875   1 VPGRLEvvGENNGVLVIDDYAHNPDAMEAALRALRNLFPGRLI-LVFGGMGDRdaEFHALLGRLAAALADVVILTG 75
 
Name Accession Description Interval E-value
FolC COG0285
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ...
3-422 2.34e-158

Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440054 [Multi-domain]  Cd Length: 423  Bit Score: 453.02  E-value: 2.34e-158
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   3 ETYEQALAFIHGRHKWTKTPTFDRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFN 82
Cdd:COG0285    2 TTYQEALAYLESLHPFGIKLGLERIRALLERLGNPQRKLPVIHVAGTNGKGSTAAMLESILRAAGYRVGLYTSPHLVRFN 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  83 ERIQDNNGPISDAQLLTLVQRLEPLVRAQDVAHPgfelTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKL 162
Cdd:COG0285   82 ERIRINGEPISDEELVEALEEVEPAVEEVDAGPP----TFFEVTTAAAFLYFAEAPVDVAVLEVGLGGRLDATNVI-DPL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 163 AAVITSVSYDHMHVLGDTLTEITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLYVYGQSFGMRTVDHQ-LTYV 241
Cdd:COG0285  157 VSVITSIGLDHTDFLGDTLEEIAREKAGIIKPGVPVVTGDQQPEALEVIEERAAELGAPLYRAGRDFSVEEREGAvFSYQ 236
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 242 IDQHKLP-VQLNLNGQYQIGNAAVAIKTVQtVAPMLGVTIADAAIQEGLRHVIWPARFETVADHPLVIVDGAHNVAGIDA 320
Cdd:COG0285  237 GPGGEYEdLPLPLLGAHQAENAALALAALE-ALRELGLPISEEAIREGLANARWPGRLEVLSRGPLVILDGAHNPAGARA 315
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 321 LVQTLRSSYGDKTVGIVFSALADKHFEQMLRHLLAETNlKIVVVPFtaPGSR----QAIAGLPFTH-PRLTWGDDWQTAL 395
Cdd:COG0285  316 LAETLKELFPFRKLHLVFGMLADKDIEGMLAALAPLAD-EVIVTTP--PSPRaldaEELAEAARELgLRVEVAPDVEEAL 392
                        410       420       430
                 ....*....|....*....|....*....|
gi 917632672 396 KSLQAQT---DMTVITGSLYFVSEVRQQFK 422
Cdd:COG0285  393 EAALELAdpdDLILVTGSLYLVGEVRALLG 422
folC TIGR01499
folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of ...
24-419 1.66e-122

folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273659 [Multi-domain]  Cd Length: 397  Bit Score: 361.22  E-value: 1.66e-122
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   24 FDRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIQDNNGPISDAQLLTLVQR 103
Cdd:TIGR01499   1 LERMKKLLEALGNPQDLYPVIHVAGTNGKGSTCAFLESILRAAGYKVGLFTSPHLVSFNERIRINGEPISDEELAQAFEQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  104 LEPLVRAQDvahpgFELTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKLAAVITSVSYDHMHVLGDTLTE 183
Cdd:TIGR01499  81 VRPILESLS-----QQPTYFELLTLLAFLYFAQAQVDVAVLEVGLGGRLDATNVI-EPLVSVITSIGLDHTEILGDTLEE 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  184 ITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLYVYGQSFGMRTVDHQLTYVIDQH--KLPVQLNLNGQYQIGN 261
Cdd:TIGR01499 155 IAWEKAGIIKEGVPIVTGEQEPEALNVLKKKAQEKGAPLFVVGRDFNYSETDENYLSFSGANlfLEPLALSLLGDHQQEN 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  262 AAVAIKTVQTVAPmLGVTIADAAIQEGLRHVIWPARFETVA-DHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVGIVFSA 340
Cdd:TIGR01499 235 AALALAALEVLGK-QNPKLSEEAIRQGLANTIWPGRLEILSeDNPNILLDGAHNPHSAEALAEWFKKRFNGRPITLLFGA 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  341 LADKHFEQMLRHLLAETNLKIVVVPFTAPGS------RQAIAGLPFthprlTWGDDWQTALKSLQA--QTDMTVITGSLY 412
Cdd:TIGR01499 314 LADKDAAAMLAPLKPVVDKEVFVTPFDYPRAddaadlAAFAEETGK-----STVEDWREALEEALNasAEDDILVTGSLY 388

                  ....*..
gi 917632672  413 FVSEVRQ 419
Cdd:TIGR01499 389 LVGEVRK 395
PRK10846 PRK10846
bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional
25-417 5.61e-49

bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional


Pssm-ID: 182774 [Multi-domain]  Cd Length: 416  Bit Score: 171.80  E-value: 5.61e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  25 DRLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIQDNNGPISDAQLLTLVQRL 104
Cdd:PRK10846  33 ERVSQVAARLDLLKPAPFVFTVAGTNGKGTTCRTLESILMAAGYRVGVYSSPHLVRYTERVRIQGQELPESAHTASFAEI 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 105 EplvraqdVAHPGFELTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQIIaDKLAAVITSVSYDHMHVLGDTLTEI 184
Cdd:PRK10846 113 E-------AARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIV-DADVAVVTSIALDHTDWLGPDRESI 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 185 TQQKADIIAPGKPVIVG--DLPQEALTVVQDIA---QKRDSD--LYVYGQSFGMRTVDHQLTyvidqhKLPVQlnlngQY 257
Cdd:PRK10846 185 GREKAGIFRAEKPAVVGepDMPSTIADVAQEKGallQRRGVDwnYSVTDHDWAFSDGDGTLE------NLPLP-----NV 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 258 QIGNAAVAIKTVQTVapmlGVTIADAAIQEGLRHVIWPARFETVADHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVGIV 337
Cdd:PRK10846 254 PLPNAATALAALRAS----GLEVSEQAIRDGIASAILPGRFQIVSESPRVILDVAHNPHAAEYLTGRLKALPKNGRVLAV 329
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 338 FSALADKHFEQMLRHLLAEtnlkiVVVPFTAP--GSRQAIAGLPFTHprLTWG---DD----WQTALKSLQAQtDMTVIT 408
Cdd:PRK10846 330 IGMLHDKDIAGTLACLKSV-----VDDWYCAPleGPRGATAEQLAEH--LGNGksfDSvaqaWDAAMADAKPE-DTVLVC 401

                 ....*....
gi 917632672 409 GSLYFVSEV 417
Cdd:PRK10846 402 GSFHTVAHV 410
PLN02913 PLN02913
dihydrofolate synthetase
24-420 3.01e-46

dihydrofolate synthetase


Pssm-ID: 178501 [Multi-domain]  Cd Length: 510  Bit Score: 166.53  E-value: 3.01e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  24 FD--RLGFILATLNHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIQDNN--GPISDAQLLT 99
Cdd:PLN02913  56 FDlgRMRRLMDRLGNPHSKFKAVHVAGTKGKGSTAAFLSNILRAQGYSVGCYTSPHLRSIRERISVGKlgKPVSTNTLND 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 100 LVQRLEPLVRaQDVAHPGFELTEFEIVTVLMFMYFEQMPVDVVILEVGIGGMWDSTQII-ADKLAA-VITSVSYDHMHVL 177
Cdd:PLN02913 136 LFHGIKPILD-EAIQLENGSLTHFEVLTALAFKLFAQENVDIAVIEAGLGGARDATNVIdSSGLAAsVITTIGEEHLAAL 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 178 GDTLTEITQQKADIIAPGKPVIVGdlpQEALTVVQDIAQKRDS----------DLYVYGQSFGMRTVD---HQLTYVIDQ 244
Cdd:PLN02913 215 GGSLESIALAKSGIIKQGRPVVLG---GPFLPHIESILRDKASsmnspvvsasDPGVRSSIKGIITDNgkpCQSCDIVIR 291
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 245 HKLPVQLNLN---------GQYQIGNAAVAIktvqTVAPML---GVTIADAAIQEGLRHVIWPARFETVADHPL------ 306
Cdd:PLN02913 292 VEKDDPLFIElsdvnlrmlGSHQLQNAVTAA----CAALCLrdqGWRISDASIRAGLENTNLLGRSQFLTSKEAevlglp 367
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 307 ---VIVDGAHNVAGIDALVQTLRSSYGDKTVGIVFSALADKHFEQMLRHLLAETNLKIVVV-----------PFTAP--- 369
Cdd:PLN02913 368 gatVLLDGAHTKESAKALVDTIKTAFPEARLALVVAMASDKDHLAFASEFLSGLKPEAVFLteadiaggksrSTSASalk 447
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 917632672 370 ----------GSRQAIAGLPFTHPRLTWGDdwQTALKS-LQAQTDMTVITGSLYFVSEVRQQ 420
Cdd:PLN02913 448 eawikaapelGIETLLAENNSLLKSLVDAS--AILRKArTLDPSSVVCVTGSLHIVSAVLAS 507
PLN02881 PLN02881
tetrahydrofolylpolyglutamate synthase
3-313 6.25e-42

tetrahydrofolylpolyglutamate synthase


Pssm-ID: 215476  Cd Length: 530  Bit Score: 155.20  E-value: 6.25e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   3 ETYEQAL----AFIHGR---HKWTKTPTFDRLGFILATLNHPEH--KQKYIHVTGTNGKGSTSQMMASILRAANLQVGLF 73
Cdd:PLN02881  14 DSYEEALdalsSLITKKsraDPSNPGDQFDLLFDYLKILELEEAisRLKVIHVAGTKGKGSTCTFTESILRNCGFRTGLF 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  74 SSPFI----ERFneRIqdnNG-PISDAQLLT----LVQRLEPLVrAQDVAHPGFelteFEIVTVLMFMYFEQMPVDVVIL 144
Cdd:PLN02881  94 TSPHLidvrERF--RL---DGvDISEEKFLRyfwwCWDRLKEKT-TEDLPMPAY----FRFLTLLAFKIFSAEQVDVAIL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 145 EVGIGGMWDSTQIIADKLAAVITSVSYDHMHVLGDTLTEITQQKADIIAPGKPVIVGDLPQEALTVVQDIAQKRDSDLyv 224
Cdd:PLN02881 164 EVGLGGRLDATNVVQKPVVCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVPL-- 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 225 ygqsfgmrTVDHQLtyviDQHKL-PVQLNLNGQYQIGNAAVAIKTVQTVAPMLGVTIADAAIQE---------GLRHVIW 294
Cdd:PLN02881 242 --------QVVEPL----DSYGLsGLKLGLAGEHQYLNAGLAVALCSTWLQRTGHEEFEALLQAgtlpeqfikGLSTASL 309
                        330       340
                 ....*....|....*....|....*...
gi 917632672 295 PARFETVADHPLVI---------VDGAH 313
Cdd:PLN02881 310 QGRAQVVPDSYINSedsgdlvfyLDGAH 337
murE TIGR01085
UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, ...
35-327 8.90e-12

UDP-N-acetylmuramyl-tripeptide synthetase; Most members of this family are EC 6.3.2.13, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase. An exception is Staphylococcus aureus, in which diaminopimelate is replaced by lysine in the peptidoglycan and MurE is EC 6.3.2.7. The Mycobacteria, part of the closest neighboring branch outside of the low-GC Gram-positive bacteria, use diaminopimelate. A close homolog, scoring just below the trusted cutoff, is found (with introns) in Arabidopsis thaliana. Its role is unknown. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]


Pssm-ID: 273435 [Multi-domain]  Cd Length: 464  Bit Score: 66.57  E-value: 8.90e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   35 NHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSPFIERFNERIqdnngpisdaqlltlvqrleplvrAQDVA 114
Cdd:TIGR01085  79 GHPSKKLKVIGVTGTNGKTTTTSLIAQLLRLLGKKTGLIGTIGYRLGGNDL------------------------IKNPA 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  115 HpgfeLTEFEIVTVLMFMY-FEQMPVDVVILEVGIGGMWDSTQIIADKLAAVITSVSYDHMHVLGdTLTEITQQKA---- 189
Cdd:TIGR01085 135 A----LTTPEALTLQSTLAeMVEAGAQYAVMEVSSHALAQGRVRGVRFDAAVFTNLSRDHLDFHG-TMENYFAAKAslft 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  190 DIIAPGKPVI----------VGDLPQEalTVVQDIAQKRDS---DLYVYgqSFGMRTVDHQLTYVIDQHKLPVQLNLNGQ 256
Cdd:TIGR01085 210 ELGLKRFAVInlddeygaqfVKRLPKD--ITVSAITQPADGraqDIKIT--DSGYSFEGQQFTFETPAGEGHLHTPLIGR 285
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 917632672  257 YQIGNAAVAIKTVQTVapmLGVTIADaaIQEGLRHVIW-PARFETV--ADHPLVIVDGAHNvagIDALVQTLRS 327
Cdd:TIGR01085 286 FNVYNLLAALATLLHL---GGIDLED--IVAALEKFRGvPGRMELVdgGQKFLVIVDYAHT---PDALEKALRT 351
murE PRK00139
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional
35-326 1.16e-11

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional


Pssm-ID: 234660 [Multi-domain]  Cd Length: 460  Bit Score: 66.31  E-value: 1.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  35 NHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSpfIE-RFNERIQDNngpisdaqlltlvqrleplvraqdv 113
Cdd:PRK00139  89 GHPSDKLKLIGVTGTNGKTTTAYLLAQILRLLGEKTALIGT--LGnGIGGELIPS------------------------- 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 114 ahpgfELTEFEIVTVlmFMYFEQMP---VDVVILEVgiggmwdSTQIIA----DKL---AAVITSVSYDHM--HvlgDTL 181
Cdd:PRK00139 142 -----GLTTPDALDL--QRLLAELVdagVTYAAMEV-------SSHALDqgrvDGLkfdVAVFTNLSRDHLdyH---GTM 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 182 TEITQQKADIIAPGKP--VIVGDLP--QEALTVVQDIAQKR-DSDLYVYGQSFGMRTVDHQLTYvidqhklPVQLNLNGQ 256
Cdd:PRK00139 205 EDYLAAKARLFSELGLaaVINADDEvgRRLLALPDAYAVSMaGADLRATDVEYTDSGQTFTLVT-------EVESPLIGR 277
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 917632672 257 YQIGNAAVAIktvqTVAPMLGVTIADAAIQ-EGLRHViwPARFETV--ADHPLVIVDGAHNVAGIDALVQTLR 326
Cdd:PRK00139 278 FNVSNLLAAL----AALLALGVPLEDALAAlAKLQGV--PGRMERVdaGQGPLVIVDYAHTPDALEKVLEALR 344
MurE COG0769
UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; ...
26-326 3.11e-11

UDP-N-acetylmuramyl tripeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl tripeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440532 [Multi-domain]  Cd Length: 459  Bit Score: 64.71  E-value: 3.11e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  26 RLGFILATL-NHPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSpfIE-RFNERIQD--NNGPisDAqlLTLV 101
Cdd:COG0769   64 ALALLAAAFyGHPSQKLKLIGVTGTNGKTTTTYLLAQILRALGKKTGLIGT--VGnGIGGELIPssLTTP--EA--LDLQ 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 102 QRLEPLVRAQdvahpgfeltefeivtvlmfmyfeqmpVDVVILEVgiggmwdSTQIIA----DKL---AAVITSVSYDHM 174
Cdd:COG0769  138 RLLAEMVDAG---------------------------VTHVVMEV-------SSHALDqgrvDGVrfdVAVFTNLTRDHL 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 175 --HvlgDTLTEITQQKA---DIIAPGKPVIV-----------GDLPQEALTVvqdiAQKRDSDLYV-------YGQSFGM 231
Cdd:COG0769  184 dyH---GTMEAYFAAKArlfDQLGPGGAAVInaddpygrrlaAAAPARVITY----GLKADADLRAtdielsaDGTRFTL 256
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 232 RTvdhqltyviDQHKLPVQLNLNGQYQIGNAAVAIktvqTVAPMLGVTIADaaIQEGLRHVIWPA-RFETV--ADHPLVI 308
Cdd:COG0769  257 VT---------PGGEVEVRLPLIGRFNVYNALAAI----AAALALGIDLEE--ILAALEKLKGVPgRMERVdgGQGPTVI 321
                        330
                 ....*....|....*...
gi 917632672 309 VDGAHNVAGIDALVQTLR 326
Cdd:COG0769  322 VDYAHTPDALENVLEALR 339
Mur_ligase_C pfam02875
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ...
294-365 1.85e-07

Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.


Pssm-ID: 460731 [Multi-domain]  Cd Length: 87  Bit Score: 48.49  E-value: 1.85e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 917632672  294 WPARFE--TVADHPLVIVDGAHNVAGIDALVQTLRSSYGDKTVgIVFSALADK--HFEQMLRHLLAETNLKIVVVP 365
Cdd:pfam02875   1 VPGRLEvvGENNGVLVIDDYAHNPDAMEAALRALRNLFPGRLI-LVFGGMGDRdaEFHALLGRLAAALADVVILTG 75
MurC COG0773
UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall ...
164-338 2.05e-07

UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440536 [Multi-domain]  Cd Length: 451  Bit Score: 52.76  E-value: 2.05e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 164 AVITSVSYDHMHVLGDtLTEITQQ--K-ADIIAPGKPVIV-GDLPqealtVVQDIAQKRDSDLYVYGQSFG--MRTVDHQ 237
Cdd:COG0773  175 AVVTNIEADHLDIYGD-LEAIKEAfhEfARNVPFYGLLVLcADDP-----GLRELLPRCGRPVITYGFSEDadYRAENIR 248
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 238 LT--------YVIDQHKLPVQLNLNGQYQIGNAAVAIktvqTVAPMLGVTiaDAAIQEGL-------RhviwpaRFETVA 302
Cdd:COG0773  249 IDgggstfdvLRRGEELGEVELNLPGRHNVLNALAAI----AVALELGVD--PEAIAEALasfkgvkR------RFELKG 316
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 917632672 303 DHP--LVIVDGAHNVAGIDALVQTLRSSYGDKTVGIVF 338
Cdd:COG0773  317 EVGgvTVIDDYAHHPTEIAATLAAAREKYPDRRLVAVF 354
Mur_ligase_M pfam08245
Mur ligase middle domain;
46-266 2.20e-07

Mur ligase middle domain;


Pssm-ID: 462409 [Multi-domain]  Cd Length: 199  Bit Score: 51.15  E-value: 2.20e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672   46 VTGTNGKGSTSQMMASILRAAnlqVGLFSSPFIeRFNERIQDNNGPISDAQLLTLVQRLEplvraqdvahpgfeltefei 125
Cdd:pfam08245   1 VTGTNGKTTTTELIAAILSLA---GGVIGTIGT-YIGKSGNTTNNAIGLPLTLAEMVEAG-------------------- 56
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  126 vtvlmfmyfeqmpVDVVILEVGIGGMwDSTQI--IADKLAAVITSVSYDHMHVLGdTLTEITQQKADIIA----PGKPVI 199
Cdd:pfam08245  57 -------------AEYAVLEVSSHGL-GEGRLsgLLKPDIAVFTNISPDHLDFHG-TMENYAKAKAELFEglpeDGIAVI 121
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 917632672  200 VGDlpQEALTVVQDIAQKRDSDLYVYGQS--FGMRTVDHQLT---YVIDQHKLP-----VQLNLNGQYQIGNAAVAI 266
Cdd:pfam08245 122 NAD--DPYGAFLIAKLKKAGVRVITYGIEgeADLRAANIELSsdgTSFDLFTVPggeleIEIPLLGRHNVYNALAAI 196
PRK11929 PRK11929
bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE ...
36-326 4.69e-07

bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF;


Pssm-ID: 237025 [Multi-domain]  Cd Length: 958  Bit Score: 52.01  E-value: 4.69e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  36 HPEHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLFSSpFIERFNERIQDNNGPISDAQLLtlvQRLEPLVRAQDvah 115
Cdd:PRK11929 107 RPSEQLSLVAVTGTNGKTSCAQLLAQLLTRLGKPCGSIGT-LGARLDGRLIPGSLTTPDAIIL---HRILARMRAAG--- 179
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 116 pgfeltefeivtvlmfmyfeqmpVDVVILEV-GIG---GMWDSTQIIadklAAVITSVSYDHMHVLGdTLTEITQQKADI 191
Cdd:PRK11929 180 -----------------------ADAVAMEAsSHGleqGRLDGLRIA----VAGFTNLTRDHLDYHG-TMQDYEEAKAAL 231
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 192 IAPGKP----VIVGDLPQEALT------VVQDIAQKRDSDLYVYGQSFGMRTVDHQLTYVIDQHKLPVQLNLNGQYQIGN 261
Cdd:PRK11929 232 FSKLPGlgaaVINADDPAAARLlaalprGLKVGYSPQNAGADVQARDLRATAHGQVFTLATPDGSYQLVTRLLGRFNVSN 311
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 917632672 262 AAVAIktvqtvAPMLGVTIADAAIQEGLRHVI-WPARFETVADH-----PLVIVDGAHNVAGIDALVQTLR 326
Cdd:PRK11929 312 LLLVA------AALKKLGLPLAQIARALAAVSpVPGRMERVGPTagaqgPLVVVDYAHTPDALAKALTALR 376
MurF COG0770
UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; ...
46-324 1.28e-06

UDP-N-acetylmuramyl pentapeptide synthase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramyl pentapeptide synthase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440533 [Multi-domain]  Cd Length: 451  Bit Score: 50.49  E-value: 1.28e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  46 VTGTNGKGSTSQMMASILRAA----------NLQVGLfsspfierfneriqdnngpisdaqlltlvqrlePLvraqdvah 115
Cdd:COG0770  105 ITGSNGKTTTKEMLAAVLSTKgkvlatpgnfNNEIGV---------------------------------PL-------- 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 116 pgfeltefeivTVLmfmyfeQMPVD--VVILEVGI---GGMWDSTQIIA-DklAAVITSVSYDHMHVLGdTLTEITQQKA 189
Cdd:COG0770  144 -----------TLL------RLPEDheFAVLEMGMnhpGEIAYLARIARpD--IAVITNIGPAHLEGFG-SLEGIARAKG 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 190 DIIA---PGKPVIV-GDLP------QEALTVVQDIAQKRDSDlyVYGQSFGMRTVDHQLTYVIDQHKLPVQLNLNGQYQI 259
Cdd:COG0770  204 EIFEglpPGGVAVLnADDPllaalaERAKARVLTFGLSEDAD--VRAEDIELDEDGTRFTLHTPGGELEVTLPLPGRHNV 281
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 917632672 260 GNAAVAIktvqTVAPMLGVTIADaaIQEGLRHVIWPA-RFETV-ADHPLVIVDGAHN------VAGIDALVQT 324
Cdd:COG0770  282 SNALAAA----AVALALGLDLEE--IAAGLAAFQPVKgRLEVIeGAGGVTLIDDSYNanpdsmKAALDVLAQL 348
PRK14016 PRK14016
cyanophycin synthetase; Provisional
46-174 7.08e-06

cyanophycin synthetase; Provisional


Pssm-ID: 237586 [Multi-domain]  Cd Length: 727  Bit Score: 48.23  E-value: 7.08e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  46 VTGTNGKGSTSQMMASILRAANLQVGLFSSP--FIErfNERIQ--DNNGPISDAQLLTlvqrleplvraqdvaHPGfelt 121
Cdd:PRK14016 485 VTGTNGKTTTTRLIAHILKLSGKRVGMTTTDgvYID--GRLIDkgDCTGPKSARRVLM---------------NPD---- 543
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 917632672 122 efeivtvlmfmyfeqmpVDVVILEVGIGGmwdstqIIADKLA------AVITSVSYDHM 174
Cdd:PRK14016 544 -----------------VEAAVLETARGG------ILREGLAydrcdvGVVTNIGEDHL 579
MurD COG0771
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ...
38-304 4.81e-04

UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis


Pssm-ID: 440534 [Multi-domain]  Cd Length: 445  Bit Score: 42.38  E-value: 4.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672  38 EHKQKYIHVTGTNGKGSTSQMMASILRAANLQVGLfsspfierfneriqdnNGPISDAqLLTLVQRLEPLvraqdvahpg 117
Cdd:COG0771  102 LSPAPIIAITGTNGKTTTTTLIGHILKAAGLRVAV----------------GGNIGTP-LLDLLLEPEPP---------- 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 118 feltefeivtvlmfmyfeqmpvDVVILEVGiggmwdSTQII-ADKL---AAVITSVSYDHM--HvlgDTLTEITQQKADI 191
Cdd:COG0771  155 ----------------------DVYVLELS------SFQLEtTPSLrpdVAVILNITPDHLdrH---GSMEAYAAAKARI 203
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 917632672 192 IAPGKP----VIVGDLPqealtVVQDIAQKRDSDLYVYG----QSFGMRTVDHQLTYVIDQHKL-PV-QLNLNGQYQIGN 261
Cdd:COG0771  204 FANQTPddyaVLNADDP-----LTRALAEEAKARVVPFSlkepLEGGAGLEDGKLVDRASGEELlPVdDLRLPGRHNLEN 278
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 917632672 262 AAVAIktvqTVAPMLGVtiADAAIQEGLR------HviwpaRFETVADH 304
Cdd:COG0771  279 ALAAL----AAARALGV--PPEAIREALRsfkglpH-----RLEFVAEI 316
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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