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Conserved domains on  [gi|529274795|gb|AGS78688|]
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UL32 [anatid alphaherpesvirus 1]

Protein Classification

PHA03232 family protein( domain architecture ID 10010482)

PHA03232 family protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PHA03232 PHA03232
DNA packaging protein UL32; Provisional
9-653 0e+00

DNA packaging protein UL32; Provisional


:

Pssm-ID: 223015  Cd Length: 586  Bit Score: 955.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795   9 DSTRSMARFAEEVPSTDGEGWTSGALDADYCAFDPSLLATNERLCDELMFAAHLMSVPNETATEVRDENRDdinPASDNL 88
Cdd:PHA03232   1 ASPMGFLRSAAEVGTELGSGWKEGAFERPYVAFDPALLALNDSLCDELLFAAHLIQIPPPEALEEDVEADP---EDPDGE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  89 LVPDLAAFVEASADAFALDRSCLVCRLIDTYKKKFGLTSQWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFLAT 168
Cdd:PHA03232  78 GHPDTAPFVEAAADTLALDRPCLVCRTIDLYRRKFGLSPEWMADYAMLCAKCLAAPPCATATFVAAFEFVYIMDKHFLRR 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 169 HRTTLTGSFARRVLTLNDVQRHFFLHGCCRTDGGIPGSTSSMNQPLestntritspmvQARTSRSTKVLFSNYSFLAQTA 248
Cdd:PHA03232 158 HGATLVGAFARRVLTLVDIQRHFFLHGCFRTDGGVPGRRPSEPPPP------------KAGSPGAAKVQYSNYSFLVQSA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 249 TRTMLMTLADNSSNDVQNNGTQRTNYYSSGHHStltalPGQPSLAAALAGWKECAKHVECHGSAASRsgvGQKDSCATLA 328
Cdd:PHA03232 226 TRAMLLTLADGQANDAGANGAEAGAAGGSGPQG-----PKPQSLAVALMNWKECARLLDCSGSERRR---GGGESCCERA 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 329 YVDDDAFEMHeelrlerererakshsmyarpkrlatrskpardengATRVHGTGPSEQAHREDWAYADLTLLLLVGTGAI 408
Cdd:PHA03232 298 AAEDDEYERE------------------------------------ATAALAGAGAARATPSKWGYADLALLLLAGTGAT 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 409 WELNDTTNTVLLARRNAVARYWRDHKRALARETAPKFSRFAENDAEPVTSLGPVLATTLKHTRCKSRTGGECILCNLLPI 488
Cdd:PHA03232 342 WEDGERTNAAAEARRATVEEYWAAHRAALARDTAPRFARFAGEDAEPDLALGPVLATTLKHARGRGRTGGECLLCNLLLT 421
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 489 RTYWLAIRRLKRDIVAHSANNLGLFDCIAPVIDTWSEGEYEEIADGGRFVAMVKAAGAEAVYKHLFCDPMCALCELQTNP 568
Cdd:PHA03232 422 RAYWLALRRLKRDVVAYSANNTSLFDCIEPVLDAWEAEGYTQPGDGGRFLALLKAAGPEAIYKHLFCDPMCAISELQTNP 501
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 569 RVLFDHPTKSDPDALNLYKAHLASENRFEGRICAGLWALAYTFKTYQIFPPKPTALASFIRDAGLLLRKHSISLVSLEHT 648
Cdd:PHA03232 502 RVLFGHPPASDPEELELYKARLASENRFEGRVCAGLWALAYTFKTYQVFPPKPTALAAFIRDAGALLRRHSISLISLEHT 581

                 ....*
gi 529274795 649 LGTYV 653
Cdd:PHA03232 582 LCTYV 586
 
Name Accession Description Interval E-value
PHA03232 PHA03232
DNA packaging protein UL32; Provisional
9-653 0e+00

DNA packaging protein UL32; Provisional


Pssm-ID: 223015  Cd Length: 586  Bit Score: 955.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795   9 DSTRSMARFAEEVPSTDGEGWTSGALDADYCAFDPSLLATNERLCDELMFAAHLMSVPNETATEVRDENRDdinPASDNL 88
Cdd:PHA03232   1 ASPMGFLRSAAEVGTELGSGWKEGAFERPYVAFDPALLALNDSLCDELLFAAHLIQIPPPEALEEDVEADP---EDPDGE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  89 LVPDLAAFVEASADAFALDRSCLVCRLIDTYKKKFGLTSQWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFLAT 168
Cdd:PHA03232  78 GHPDTAPFVEAAADTLALDRPCLVCRTIDLYRRKFGLSPEWMADYAMLCAKCLAAPPCATATFVAAFEFVYIMDKHFLRR 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 169 HRTTLTGSFARRVLTLNDVQRHFFLHGCCRTDGGIPGSTSSMNQPLestntritspmvQARTSRSTKVLFSNYSFLAQTA 248
Cdd:PHA03232 158 HGATLVGAFARRVLTLVDIQRHFFLHGCFRTDGGVPGRRPSEPPPP------------KAGSPGAAKVQYSNYSFLVQSA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 249 TRTMLMTLADNSSNDVQNNGTQRTNYYSSGHHStltalPGQPSLAAALAGWKECAKHVECHGSAASRsgvGQKDSCATLA 328
Cdd:PHA03232 226 TRAMLLTLADGQANDAGANGAEAGAAGGSGPQG-----PKPQSLAVALMNWKECARLLDCSGSERRR---GGGESCCERA 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 329 YVDDDAFEMHeelrlerererakshsmyarpkrlatrskpardengATRVHGTGPSEQAHREDWAYADLTLLLLVGTGAI 408
Cdd:PHA03232 298 AAEDDEYERE------------------------------------ATAALAGAGAARATPSKWGYADLALLLLAGTGAT 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 409 WELNDTTNTVLLARRNAVARYWRDHKRALARETAPKFSRFAENDAEPVTSLGPVLATTLKHTRCKSRTGGECILCNLLPI 488
Cdd:PHA03232 342 WEDGERTNAAAEARRATVEEYWAAHRAALARDTAPRFARFAGEDAEPDLALGPVLATTLKHARGRGRTGGECLLCNLLLT 421
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 489 RTYWLAIRRLKRDIVAHSANNLGLFDCIAPVIDTWSEGEYEEIADGGRFVAMVKAAGAEAVYKHLFCDPMCALCELQTNP 568
Cdd:PHA03232 422 RAYWLALRRLKRDVVAYSANNTSLFDCIEPVLDAWEAEGYTQPGDGGRFLALLKAAGPEAIYKHLFCDPMCAISELQTNP 501
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 569 RVLFDHPTKSDPDALNLYKAHLASENRFEGRICAGLWALAYTFKTYQIFPPKPTALASFIRDAGLLLRKHSISLVSLEHT 648
Cdd:PHA03232 502 RVLFGHPPASDPEELELYKARLASENRFEGRVCAGLWALAYTFKTYQVFPPKPTALAAFIRDAGALLRRHSISLISLEHT 581

                 ....*
gi 529274795 649 LGTYV 653
Cdd:PHA03232 582 LCTYV 586
Herpes_env pfam01673
Herpesvirus putative major envelope glycoprotein; This family consists of probable major ...
52-653 0e+00

Herpesvirus putative major envelope glycoprotein; This family consists of probable major envelope glycoproteins from members of the herpesviridae including herpes simplex virus, human cytomegalovirus and varicella-zoster virus. Members of the herpesviridae have a dsDNA genome and do not have a RNA stage during there replication.


Pssm-ID: 279941  Cd Length: 526  Bit Score: 613.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795   52 LCDELMFAAHLMSVPNETATEvrdeNRDDINPASD--------NLLVPDLAAFVEASADAFALDRSCLVCRLIDTYKKKF 123
Cdd:pfam01673   1 LFTELLWAAHLIQVPMDAAVA----ADVTVEPSSDcggavdgsGDGHSETAGFIESAADVLALDRACLVCRVLSLYRKKF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  124 GLTSQWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFLATHRTTLTGSFARRVLTLNDVQRHFFLHGCCRTDGGI 203
Cdd:pfam01673  77 GLSPEWMADYALLCFKCLAAPPCATSTFIAAFEFVYLMDKHFLPAHGATLVGSFGRRVLTLFDIQRHFFLHGCFRTDGGL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  204 PGSTSSMNQplestntritspmvqartsrsTKVLFSNYSFLAQTATRTMLMTLADNSSNDVQNNGTQrtnyyssghhstl 283
Cdd:pfam01673 157 PGRRPPPGK---------------------AKVDYSNYSFLVQSVVRAAVMSLSGAGSSSWEAGHGK------------- 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  284 talpgQPSLAAALAGWKECAKHVECHGSAASRSGVgqkDSCATLAYVDDDAFEmheelrlERERERAKSHSMyarpkrla 363
Cdd:pfam01673 203 -----QPSLAVALANWKDCARPLECPFNKPRRHGL---QTCKQRANAEDVEFE-------QELIDRALEESA-------- 259
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  364 trsKPARdengatrvhgtgpseqahredWAYADLTLLLLVGTGAIWELNDTTNTVLLARRNAVARYWRDHKRALARETAP 443
Cdd:pfam01673 260 ---SPST---------------------WRYADLVLLLLAGTGSMPETPARLDLATEARRETVRMYWEAHRDEEGNDVGR 315
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  444 KFSRFAENDAEPVTSLGPVLATTLKHTRCKSRTGGECILCNLLPIRTYWLAIRRLKRDIVAHSANNLGLFDCIAPVIDTW 523
Cdd:pfam01673 316 HFSGFTSEDATPDLALGPILLTVLKHAFTRGGTSTECLLCNLLLIRYYWLALRELKRDVVSYSANNTSLFDCIQPVLDQL 395
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  524 -SEGEYEEIADGGRFVAMVKAAGAEAVYKHLFCDPMCALCELQTNPRVLFDHPTKSDPDALNLYKAHLASENRFEGRICA 602
Cdd:pfam01673 396 eRDCTTPAHGDGGRFVTLLKSAGPEAIYKHLFCDPLCAINILQTNPAVLFGHPPATHPEELELYKAALAAQNYFEGRVCR 475
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 529274795  603 GLWALAYTFKTYQIFPPKPTALASFIRDAGLLLRKHSISLVSLEHTLGTYV 653
Cdd:pfam01673 476 GLWALAYAFKAYQIFPPRPTALATFIRDAGALLRRHSISLVSLEHTLDKYV 526
 
Name Accession Description Interval E-value
PHA03232 PHA03232
DNA packaging protein UL32; Provisional
9-653 0e+00

DNA packaging protein UL32; Provisional


Pssm-ID: 223015  Cd Length: 586  Bit Score: 955.66  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795   9 DSTRSMARFAEEVPSTDGEGWTSGALDADYCAFDPSLLATNERLCDELMFAAHLMSVPNETATEVRDENRDdinPASDNL 88
Cdd:PHA03232   1 ASPMGFLRSAAEVGTELGSGWKEGAFERPYVAFDPALLALNDSLCDELLFAAHLIQIPPPEALEEDVEADP---EDPDGE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  89 LVPDLAAFVEASADAFALDRSCLVCRLIDTYKKKFGLTSQWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFLAT 168
Cdd:PHA03232  78 GHPDTAPFVEAAADTLALDRPCLVCRTIDLYRRKFGLSPEWMADYAMLCAKCLAAPPCATATFVAAFEFVYIMDKHFLRR 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 169 HRTTLTGSFARRVLTLNDVQRHFFLHGCCRTDGGIPGSTSSMNQPLestntritspmvQARTSRSTKVLFSNYSFLAQTA 248
Cdd:PHA03232 158 HGATLVGAFARRVLTLVDIQRHFFLHGCFRTDGGVPGRRPSEPPPP------------KAGSPGAAKVQYSNYSFLVQSA 225
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 249 TRTMLMTLADNSSNDVQNNGTQRTNYYSSGHHStltalPGQPSLAAALAGWKECAKHVECHGSAASRsgvGQKDSCATLA 328
Cdd:PHA03232 226 TRAMLLTLADGQANDAGANGAEAGAAGGSGPQG-----PKPQSLAVALMNWKECARLLDCSGSERRR---GGGESCCERA 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 329 YVDDDAFEMHeelrlerererakshsmyarpkrlatrskpardengATRVHGTGPSEQAHREDWAYADLTLLLLVGTGAI 408
Cdd:PHA03232 298 AAEDDEYERE------------------------------------ATAALAGAGAARATPSKWGYADLALLLLAGTGAT 341
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 409 WELNDTTNTVLLARRNAVARYWRDHKRALARETAPKFSRFAENDAEPVTSLGPVLATTLKHTRCKSRTGGECILCNLLPI 488
Cdd:PHA03232 342 WEDGERTNAAAEARRATVEEYWAAHRAALARDTAPRFARFAGEDAEPDLALGPVLATTLKHARGRGRTGGECLLCNLLLT 421
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 489 RTYWLAIRRLKRDIVAHSANNLGLFDCIAPVIDTWSEGEYEEIADGGRFVAMVKAAGAEAVYKHLFCDPMCALCELQTNP 568
Cdd:PHA03232 422 RAYWLALRRLKRDVVAYSANNTSLFDCIEPVLDAWEAEGYTQPGDGGRFLALLKAAGPEAIYKHLFCDPMCAISELQTNP 501
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 569 RVLFDHPTKSDPDALNLYKAHLASENRFEGRICAGLWALAYTFKTYQIFPPKPTALASFIRDAGLLLRKHSISLVSLEHT 648
Cdd:PHA03232 502 RVLFGHPPASDPEELELYKARLASENRFEGRVCAGLWALAYTFKTYQVFPPKPTALAAFIRDAGALLRRHSISLISLEHT 581

                 ....*
gi 529274795 649 LGTYV 653
Cdd:PHA03232 582 LCTYV 586
Herpes_env pfam01673
Herpesvirus putative major envelope glycoprotein; This family consists of probable major ...
52-653 0e+00

Herpesvirus putative major envelope glycoprotein; This family consists of probable major envelope glycoproteins from members of the herpesviridae including herpes simplex virus, human cytomegalovirus and varicella-zoster virus. Members of the herpesviridae have a dsDNA genome and do not have a RNA stage during there replication.


Pssm-ID: 279941  Cd Length: 526  Bit Score: 613.42  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795   52 LCDELMFAAHLMSVPNETATEvrdeNRDDINPASD--------NLLVPDLAAFVEASADAFALDRSCLVCRLIDTYKKKF 123
Cdd:pfam01673   1 LFTELLWAAHLIQVPMDAAVA----ADVTVEPSSDcggavdgsGDGHSETAGFIESAADVLALDRACLVCRVLSLYRKKF 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  124 GLTSQWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFLATHRTTLTGSFARRVLTLNDVQRHFFLHGCCRTDGGI 203
Cdd:pfam01673  77 GLSPEWMADYALLCFKCLAAPPCATSTFIAAFEFVYLMDKHFLPAHGATLVGSFGRRVLTLFDIQRHFFLHGCFRTDGGL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  204 PGSTSSMNQplestntritspmvqartsrsTKVLFSNYSFLAQTATRTMLMTLADNSSNDVQNNGTQrtnyyssghhstl 283
Cdd:pfam01673 157 PGRRPPPGK---------------------AKVDYSNYSFLVQSVVRAAVMSLSGAGSSSWEAGHGK------------- 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  284 talpgQPSLAAALAGWKECAKHVECHGSAASRSGVgqkDSCATLAYVDDDAFEmheelrlERERERAKSHSMyarpkrla 363
Cdd:pfam01673 203 -----QPSLAVALANWKDCARPLECPFNKPRRHGL---QTCKQRANAEDVEFE-------QELIDRALEESA-------- 259
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  364 trsKPARdengatrvhgtgpseqahredWAYADLTLLLLVGTGAIWELNDTTNTVLLARRNAVARYWRDHKRALARETAP 443
Cdd:pfam01673 260 ---SPST---------------------WRYADLVLLLLAGTGSMPETPARLDLATEARRETVRMYWEAHRDEEGNDVGR 315
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  444 KFSRFAENDAEPVTSLGPVLATTLKHTRCKSRTGGECILCNLLPIRTYWLAIRRLKRDIVAHSANNLGLFDCIAPVIDTW 523
Cdd:pfam01673 316 HFSGFTSEDATPDLALGPILLTVLKHAFTRGGTSTECLLCNLLLIRYYWLALRELKRDVVSYSANNTSLFDCIQPVLDQL 395
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  524 -SEGEYEEIADGGRFVAMVKAAGAEAVYKHLFCDPMCALCELQTNPRVLFDHPTKSDPDALNLYKAHLASENRFEGRICA 602
Cdd:pfam01673 396 eRDCTTPAHGDGGRFVTLLKSAGPEAIYKHLFCDPLCAINILQTNPAVLFGHPPATHPEELELYKAALAAQNYFEGRVCR 475
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 529274795  603 GLWALAYTFKTYQIFPPKPTALASFIRDAGLLLRKHSISLVSLEHTLGTYV 653
Cdd:pfam01673 476 GLWALAYAFKAYQIFPPRPTALATFIRDAGALLRRHSISLVSLEHTLDKYV 526
PHA03233 PHA03233
DNA packaging protein UL32; Provisional
38-653 1.09e-21

DNA packaging protein UL32; Provisional


Pssm-ID: 223016  Cd Length: 518  Bit Score: 99.01  E-value: 1.09e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795  38 YCAFDPSLLATNERLCDELMFAAHLMSVPNE----------------TATEVRDENRDDINPASDNLLVPDLAAFvEASA 101
Cdd:PHA03233   5 YKGWSPELTTIDSELVNELLLYAHPTQSPPApaeattasstdnttsaSVTDSQASRGGGGGAAAACDLEAELARI-EESL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 102 D---------AFALDRSCLVCRLI------DTYKKkfgltsqWIADYAMLCNKCLAAPPCATTTFIAAFELVYIMDKHFL 166
Cdd:PHA03233  84 NleelkrlctPLEIDTRCNLCAIVsiclrqDPDQA-------WLLDYSLLCYKCSYAPRTALSTLIVATEFLHLLQRHFP 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 167 ATHRTTLtgsFARRVLTLNDVQRHFFLHGC-CRTDGgipgstssmnQPLESTNtrITspmvqartsrstkvlfsnysfLA 245
Cdd:PHA03233 157 DINFDNL---FRNRILTIFDFHVHFFINRCfANTVG----------DPVQNEN--IT---------------------LN 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 246 QTA-TRTMLMtladnSSNDVQNNGTQRtnyyssghhstltalPGQPSLAAALAGwKECAKHVECHGSAAsrsgvgqKDSC 324
Cdd:PHA03233 201 HMAvVRALLL-----KEDTVPYTKIRR---------------FLQKKKKPAAAE-EELLRLLKKHTRPS-------KTRF 252
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 325 ATLayvdddAFEMheelrlerererakshsmyarpkrlatrskpardengatrvhgtgpseqahredWAyadltllllvG 404
Cdd:PHA03233 253 TRL------LFYM------------------------------------------------------WS----------G 262
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 405 TGAIwelnDTTNTVLLARRNAvarywrdhkRALaretapKFSRFAENDAEPvtSLGPVLATTLKHTRCKSRTGGECILCN 484
Cdd:PHA03233 263 TNVF----FNTPLTDLAIKKH---------HRL------KALYSRKSEIEK--SVGPIYLSPVPVFITKNQTTTVCLLCE 321
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 485 LLPIRTY-WLAIRRLKRDIVAHSANNLGLFDCIAPVI-DTWSEGEYE-----EIADGGRFVAMV---------------- 541
Cdd:PHA03233 322 LMACSYQdNLFLRELYERITNYCQNNLKMIDRIQLVLaDILPTRICTtpkglKNKDVSKYVLDNepsfsaddapfrldah 401
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 529274795 542 -----KAAGAEAVYKHLFCDPMCALCELQTNPRVLFDHptkSDPDALNLYKAHLASENRFEGRICAGLWALAYTFKTYQI 616
Cdd:PHA03233 402 tylilRQVGVTGIYKHFFCDPQCAANIRTTNPEVLFGT---VPAEYLQELKLAICYDNEYPSSVERRVWLYIHLFKAFQI 478
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|.
gi 529274795 617 ----FPPKpTALASFIRDAGLLLRKHSISLVSLEHTLGTYV 653
Cdd:PHA03233 479 ikrnFKNK-TQLADFLRDFTQLLELHEFKLVDPSFTVDKYV 518
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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