|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-338 |
7.70e-157 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 442.72 E-value: 7.70e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 1 STMSLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQ 80
Cdd:MTH00112 9 ITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDITQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 81 LTHPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWM 160
Cdd:MTH00112 89 LTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGGWG 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 161 GLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTL 240
Cdd:MTH00112 169 GLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLMLTL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 241 LSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQWQTNKPTNPLTTAF 320
Cdd:MTH00112 249 LSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKNTLTATL 328
|
330
....*....|....*...
gi 523545284 321 TTLSILLLPLSPMMFTIP 338
Cdd:MTH00112 329 TTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
3-319 |
2.06e-133 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 383.39 E-value: 2.06e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 3 MSLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLT 82
Cdd:MTH00135 11 FSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQQMS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 83 HPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSlDSTLLSLMAIASAALGGWMGL 162
Cdd:MTH00135 91 HPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTSTLVGGWGGL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 163 NQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLS 242
Cdd:MTH00135 170 NQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLILLS 249
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 523545284 243 LAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQW--QTNKPTNPLTTA 319
Cdd:MTH00135 250 LGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWrlPSTQLTLPLAIS 328
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
4-318 |
3.79e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 367.71 E-value: 3.79e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 4 SLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTH 83
Cdd:MTH00070 12 SLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIMNMQT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGLN 163
Cdd:MTH00070 92 PLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSL 243
Cdd:MTH00070 172 QTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLTLLSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 523545284 244 AGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQWQTNKPTNPLTT 318
Cdd:MTH00070 252 GGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNLLS 326
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
2-318 |
1.70e-112 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 330.27 E-value: 1.70e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 2 TMSLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQL 81
Cdd:MTH00105 10 YLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTITKL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 82 THPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWMG 161
Cdd:MTH00105 90 TNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGGWGG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 162 LNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLL 241
Cdd:MTH00105 170 LNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILLTLL 249
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 523545284 242 SLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQWQ--TNKPTNPLTT 318
Cdd:MTH00105 250 SLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQfeNTKPMTLLPT 328
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
3-338 |
7.71e-94 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 283.01 E-value: 7.71e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 3 MSLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLT 82
Cdd:MTH00200 11 LSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISEML 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 83 HPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGL 162
Cdd:MTH00200 91 GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGGWGGL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 163 NQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLS 242
Cdd:MTH00200 171 NQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLS 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 243 LAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQWQTNKPTNPLTTAFTT 322
Cdd:MTH00200 251 LGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLL 330
|
330
....*....|....*.
gi 523545284 323 LSILLLPLSPMMFTIP 338
Cdd:MTH00200 331 LSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
4-318 |
2.27e-89 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 271.42 E-value: 2.27e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 4 SLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTH 83
Cdd:MTH00041 12 SIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSINGPLN 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGLN 163
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSL 243
Cdd:MTH00041 172 QTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSL 251
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 523545284 244 AGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPNSTNYMKQWQTNKPTNPLTT 318
Cdd:MTH00041 252 GGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
3-311 |
3.97e-61 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 198.51 E-value: 3.97e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 3 MSLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGqwditqLT 82
Cdd:MTH00160 12 STLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLNLM------LF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 83 HPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTspsLDSTLLSLMAIASAALGGWMGL 162
Cdd:MTH00160 86 NNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIILSAIIGAIGGL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 163 NQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLS 242
Cdd:MTH00160 163 NQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLS 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 523545284 243 LAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCAtITLPPNSTNYMKQWQTNK 311
Cdd:MTH00160 243 LGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNK 310
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-294 |
3.65e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 175.07 E-value: 3.65e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 5 LLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITqlthp 84
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 85 mscMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLD-STLLSLMAIASAALGGWMGLN 163
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWlAYLLCVISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTvMTTWTKIPSLSTIFMLTLLSL 243
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKD-LGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 523545284 244 AGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATI 294
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
4-302 |
7.80e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 161.49 E-value: 7.80e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 4 SLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSgqwdiTQLTH 83
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP-----SLLKN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMSCMLLtIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGLN 163
Cdd:MTH00011 89 ITALMLL-VSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSL 243
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 523545284 244 AGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYcATITLPPNSTN 302
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
4-290 |
3.32e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 146.36 E-value: 3.32e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 4 SLLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMtnAWFSGQWditqlTH 83
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-----LS 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPitLFYLTSPSLDSTLLSLMAIASAALGGWMGLN 163
Cdd:MTH00197 79 LLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGIGGMN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSL 243
Cdd:MTH00197 157 QSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSL 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 523545284 244 AGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAY 290
Cdd:MTH00197 237 GGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
6-290 |
5.65e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 132.55 E-value: 5.65e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 6 LLGTSITISSNHWMTAWVGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLF-SSMTNAwFSGQWDITQLTH 83
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMS------------CMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMK----FPPITLFYLTSPSLDS---T 144
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 145 LLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTI-ILNYNPN-LTLITFYL--YTITTSAIFFILNTtntfkLS 220
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVILL-----LS 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 221 TVMTTWTKI----------PSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAY 290
Cdd:COG1007 346 RKGGEAEEIedlaglarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
6-288 |
1.34e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 118.00 E-value: 1.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 6 LLGTSITISSNHWMTAWVGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTHP 84
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 85 ------------MSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMK---FPPIT-LFYLTSPSLD---STL 145
Cdd:PRK05777 193 ladgsgnsllllFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSedwQQV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 146 LSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTI---ILNYNPNLTLItFYL--YTITTSAIF-FILNTTNTFKL 219
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglaAGTAEGYSAVL-FYLlaYLFMTLGAFgVISLLRRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 523545284 220 STVMTTWTKI----PSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:PRK05777 352 AESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
15-260 |
1.48e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 114.72 E-value: 1.48e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 15 SNHWMTAWVGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQL-----------T 82
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 83 HPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS-*MTTCLLLATIMKFPPITLFYLTSPSLDST-----LLSLMAIASAAL 156
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGApTPVSALLAATLVKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 157 GGWMGLNQTQTRKVLAFSSIAHLGWMTIIL----NYNPNLTLITFYLYTITTSAIF-----FILNTTNTFKLSTVMTTWT 227
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 523545284 228 KIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQ 260
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
5-288 |
1.56e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.20 E-value: 1.56e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 5 LLLGTSITISSNHWMTAWVGLEINTLAILPLI-SKSHHPRAIEASTKYFLTQAAASTLLLFS-------------SMTNA 70
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 71 WFSGQWDITQLTHPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLfyLTSPSLDSTLLSLMA 150
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSI--LVSIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 151 IASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNP----NLTLITFYLYTITTSAIFFILNTTNTFK--LSTVMT 224
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSfesiQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 523545284 225 TWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
5-288 |
6.57e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 110.11 E-value: 6.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 5 LLLGTSITISSNHWMTAWVGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDI----T 79
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 80 QLTHPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATImkfPPITLFY-LTSPSLDSTLLSLMAIASAALGG 158
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATV---PKIGVFSiLVQIGPVTNVVLICAVLSIIYGA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 159 WMGLNQTQTRKVLAFSSIAHLGW----MTIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFK--LSTVMTTWTKIPSL 232
Cdd:MTH00199 263 IGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVI 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 523545284 233 STIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
5-288 |
2.47e-25 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 105.23 E-value: 2.47e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 5 LLLGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTHP 84
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 85 MS----------CMLLTIAISIKLGLVPFHFWFPE----------VLQGS*MTTCLLLAtIMKFppITLFYLTSPSLD-S 143
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDaypaapspvsALLSGLLTKVGVYA-ILRV--LTLLFGADPALFlG 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 144 TLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLY----TITTSAIFF----ILNTTN 215
Cdd:COG0651 273 TLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLaagaIERATG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 523545284 216 TFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:COG0651 353 TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
6-289 |
6.67e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 104.64 E-value: 6.67e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 6 LLGTSITISSNHWMTAWVGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTHP 84
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 85 ------------MSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMK---FPPITLFYLTSPSLDST----L 145
Cdd:TIGR01770 192 lsngmlnislllLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFGFSEawqiF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 146 LSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGW--MTIILNYNPNLTLITFYL--YTITTSAIFFILNTTNTFK--- 218
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYilIGLLAGTLEGIKAVLFYIfiYALMSLGAFGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 523545284 219 ---LSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLA 289
Cdd:TIGR01770 352 ieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
7-288 |
2.48e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 88.76 E-value: 2.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 7 LGTSITISSNHWMTAWVGLEINTLAILPLISKSHHPRAI---------EASTKYFLTQAAASTLLLFSSMTNAWFSGQ-- 75
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 76 ------------WDITQLTHPMSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLfyLTSPSLDS 143
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYIL--LTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 144 TLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFY----LYTITTSAIFFILNTTNTF-- 217
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWtyavTYLVSALASFTVICTLEEFgt 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 218 -------------------KLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLS 278
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAFSSSLSIYYLVA 516
|
330
....*....|....*..
gi 523545284 279 LLGL-------FFYLRL 288
Cdd:MTH00198 517 LFAIictcisaFYYIRI 533
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
43-255 |
7.75e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 68.88 E-value: 7.75e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 43 RAIEASTKYFLTQAAASTLLLF---------------SSMTNAWFSgqwdiTQLTHPMSC----MLLTIAISIKLGLVPF 103
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYgfswlyglsggeielQEIVNGLIN-----TQMYNSPGIsialIFITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 104 HFWFPEVLQGS*MTTCLLLATIMKFPPITL----FYLTSPSLDS---TLLSLMAIASAALGGWMGLNQTQTRKVLAFSSI 176
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatriFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 177 AHLGWMTI-ILNYNPNL---TLITFYLYTI-----TTSAIFFILNTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLP 247
Cdd:CHL00049 314 GQIGYVIIgIIVGDSNDgyaSMITYMLFYIfmnlgTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*...
gi 523545284 248 PLTGFLPK 255
Cdd:CHL00049 394 PLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
41-284 |
3.96e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.64 E-value: 3.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 41 HPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQW--DITQLT-HPMS-------CMLLTIAISIKLGLVPFHFWFPEV 110
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAaAPLPltaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 111 L-QGS*MTTCLLLATIMKFP-------PITLFYLTSPSLdSTLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWM 182
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKMGgygllrfALPLFPEASAYF-APLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 183 TI-ILNYNPN-LTLITFYL--YTITTSAIFFIL----NTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLP 254
Cdd:COG1008 315 LLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
250 260 270
....*....|....*....|....*....|
gi 523545284 255 KWLIIQELTKqeltmTATTIALLSLLGLFF 284
Cdd:COG1008 395 EFLVLLGAFQ-----VNPWLAILAALGLIL 419
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
42-255 |
1.15e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 1.15e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 42 PRAIEASTKYFLTQAAASTLLLF-SSMTNAWFSGQWDITQLTHPM---SCMLLTIA-------ISIKLGLVPFHFWFPEV 110
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALitsPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 111 LQGS*MTTCLLLATIMKFP----PITLFYLTSPSLDS---TLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMT 183
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 184 I--ILNYNPNLTLITFYLYTIT-------TSAIFFILNtTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLP 254
Cdd:PRK02504 317 IglVAGTEAGYASMVFYLLAYLfmnlgafACVILFSLR-TGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFG 395
|
.
gi 523545284 255 K 255
Cdd:PRK02504 396 K 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-299 |
1.90e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 64.90 E-value: 1.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 23 VGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFS-----SMTnawfsGQWDITQLTH--PMSCMLLT---- 91
Cdd:PRK08375 133 VFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllyGVT-----GTLNMADLAGalAENPTVVTafgf 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 92 --IAISIKLGLVPFHFWFPEVLQG-S*MTTCLLLATIMKFP--PITLFYLTSPSLD-------STLLSLMAIASAALGGW 159
Cdd:PRK08375 208 vlLALALKAAVFPLHTWLPRAYPAaPPVVTALLSGLVTKVAvyALIRIYFTVFGGDfrfalglGWLLAVLALLSMLVGSL 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 160 MGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLI--TFYL--YTITTSAIFF----ILNTTNTFKLSTVMTTWTKIPS 231
Cdd:PRK08375 288 AALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaIEVTYGTRRLSELSGLGRRMPL 367
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 523545284 232 LSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRLAYCATITLPPN 299
Cdd:PRK08375 368 TAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
42-284 |
3.24e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.19 E-value: 3.24e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 42 PRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQ-WDITQL-THPMSCMLLT-------IAISIKLGLVPFHFWFPEV-L 111
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 112 QGS*MTTCLLLATIMKFPPITLFYLTSPSLD------STLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTI- 184
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdaslyfAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLg 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 185 ILNYNP---NLTLITFYLYTITTSAIFFILNT----TNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWL 257
Cdd:TIGR01972 312 IFSFNElgiSGAVFQMISHGLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
250 260
....*....|....*....|....*..
gi 523545284 258 IIQELTKqeltmTATTIALLSLLGLFF 284
Cdd:TIGR01972 392 ILLGSFK-----VNPVVAFLAALGIVL 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
22-258 |
2.83e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 61.27 E-value: 2.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 22 WVGLEINTLAILPLIS-KSHHPRAIEASTKYFLTQAAASTLLLFS---------SMTNAWFSGQWDITQLTHPMSCM-LL 90
Cdd:PRK08376 147 FVFLEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 91 TIAISIKLGLVPFHFWFPEVLQG--S*MTTCLLLATIMKFPPI--TLFYLTSPSLDST----LLSLMAIASAALGGWMGL 162
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAV 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 163 NQTQTRKVLAFSSIAHLGWMTIILNY------NPNLTLITFY-----------------LYTITTSAIFFILNTTNTFKL 219
Cdd:PRK08376 307 VQKDVKRLLAYHSVSQIGYMLLGLGVglaalgDPAMASYGEIalaggiyhivnhalykaLLFLTAGAVIYETGTRNLNEL 386
|
250 260 270
....*....|....*....|....*....|....*....
gi 523545284 220 STVMTTwtkIPSLSTIFMLTLLSLAGLPPLTGFLPKWLI 258
Cdd:PRK08376 387 GGLART---MPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
12-284 |
7.99e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 59.94 E-value: 7.99e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 12 TISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFL------TQAAASTLLLFSSMTNAWFSGQ----W-DITQ 80
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANAATVMGDGEmailWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 81 LTHPMSCMLLTIAISI-------KLGLVPFHFWFPE-----------VLQGS*MtTCLLLAtIMKFPPITLFYLtSPSLD 142
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLL-NVALYA-VLRYYILIDAAI-GSDFP 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 143 STLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTI----TTSAIFF----ILNTT 214
Cdd:PRK06458 281 GRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLnhslTKSAIFFasgnVLQKY 360
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 215 NTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQEltMTATTIALLSLLGLFF 284
Cdd:PRK06458 361 GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARG--PLLIAILLLLLLTLAF 428
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
15-286 |
2.14e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.47 E-value: 2.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 15 SNHWMTAWVGLEINTLAILPLISKSHHpRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDIT-------QLTHPMSC 87
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 88 MLLTIAISI----KLGLVPFHFWFPE-----------VLQG--S*MTTCLLLATIMKFPPITLF-----YLTSPSLDSTL 145
Cdd:PRK08668 196 LIVFLFLLAfgvaKAGIFPLHVWAPDayseapqsfsaVLSGqlSKLGAYGFLLVLYVLPGTKLFsefgtYRGVPLFNYIL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 146 LSLMAIaSAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLT----LITFYLYTITTSAIFFILNT----TNTF 217
Cdd:PRK08668 276 AWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfaggLFHVFNHALFKGLFFLIFAAviyrTGTT 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 523545284 218 KLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTAtTIALLSLLGLFFYL 286
Cdd:PRK08668 355 KISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA-FMAFFGSIGSFLYV 422
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
15-290 |
3.64e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.85 E-value: 3.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 15 SNHWMTAWVGLEINTLAILPLISKSHH-PRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQL-----THPMSCM 88
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 89 LLTIAISI------KLGLVPFHFWFPE----------VLQGS*MTTC--LLLAtimKFPPItlFYLTSPSLdsTLLSLMA 150
Cdd:COG1009 210 LTLILLLLllgafgKSAQFPLHFWLPDamegptpvsaLLHAATMVKAgvYLLA---RLSPL--FALSPVWL--TVVAIIG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 151 IASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNpnltlitfylytITTSAIFFILN------------------ 212
Cdd:COG1009 283 AITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG------------AYVAALFHLLThaffkallflgagsviha 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 213 --TTNTFKLSTVmttWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQELTMTATTIALL-SLLGLFFYLRL 288
Cdd:COG1009 351 tgTRDIRKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVALLgAFLTAFYSFRL 427
|
..
gi 523545284 289 AY 290
Cdd:COG1009 428 FF 429
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
22-290 |
5.36e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 54.19 E-value: 5.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 22 WVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLL---------FSSMTNAWFSGQWDITQLTHPMS--CMLL 90
Cdd:PRK12663 134 YVWFEVMLIASFVLITLGQEREQLRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTtiALLF 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 91 TIAISIKLGLVPFhFWFPEVLQGS*MTTCLLLATIMK-------FPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGLN 163
Cdd:PRK12663 214 LLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALGALA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 164 QTQTRKVLAFSSIAHLGWMT--IILNYNPNLTLITFYLY--TITTSAIFFILNT----TNTFKLSTVMTTWTKIPSLSTI 235
Cdd:PRK12663 293 YKDIRRIAGYQVISSIGFILlgLALGTPAGINGAIFYLVhdMVVKTALFLIAGSlvrlTGYRSLQYLGGLYRKEPLFGAL 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 523545284 236 FMLTLLSLAGLPPLTGFLPKWLIIQ-ELTKQELTMTATTIA--LLSLLGLFFYLRLAY 290
Cdd:PRK12663 373 FLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLItsLITMYSLFRIFFLAY 430
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-259 |
9.10e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.58 E-value: 9.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 15 SNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFS-----------SMTNAWFSGQWDITQLTH 83
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 84 PMSCMLLTIAISIKLGLVPFHFW----------FPEVLQGS*MTTCLLLATIMKFPPI--TLFYLTSPSLDSTLLSLMAI 151
Cdd:PRK12662 209 QIGVLFIMVGLFIKAALFPFHKWliqayseapsFISVFFSGTSTKVMIYLIIRIVYDVfkANFVFTTLPFNNVFMILAAL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 152 AsAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLY----TITTSAIFFILNTT----NTFKLSTVM 223
Cdd:PRK12662 289 A-IVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSIsyhfGTTKLEDCL 367
|
250 260 270
....*....|....*....|....*....|....*.
gi 523545284 224 TTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLII 259
Cdd:PRK12662 368 NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
88-288 |
5.02e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.10 E-value: 5.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 88 MLLTIAISIKLGLVPFHFWFPE----------VLQGS*MTTCLLLATIMKFppiTLFYLTSPSLDSTLLSLMAIASAALG 157
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGsyyappiaiaALFGALLTKVGVYAIARTF---TLFFSHDTSFTHYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 158 GWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYT----ITTSAIFF-------ILNTTNTFKLSTVMTTW 226
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLihdmIVKAALFLligimikITGTTDLKKMGGLIKRY 369
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 523545284 227 tkiPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:PRK07691 370 ---PVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
47-258 |
8.55e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 50.47 E-value: 8.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 47 ASTKYFLTQAAASTLLLFSSMTNAWFSG--QWDITQL---THPMSCMLL-----TIAISIKLGLVPFHFWFPEV-LQGS* 115
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLllapiLVGFGIKIPLVPFHTWLPDAhVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 116 MTTCLLLATIMKFPPITL------FYLTSPSLDSTLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYN 189
Cdd:PRK06473 238 PVSVLLAGVLLKLGTYGLlrfgvgLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 190 PNLTLITFYLYTIT---TSAIFFIL--------NTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLI 258
Cdd:PRK06473 318 TPLSILAAVFQMIShglISALLFLLvgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
88-296 |
1.06e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.43 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 88 MLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDST-----LLSLMAIASAALGGWMGL 162
Cdd:PRK12650 212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAV 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 163 NQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTIT----TSAIFFIL----NTTNTFKLSTVMTTWTKIPSLST 234
Cdd:PRK12650 292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAhalfKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFV 371
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 523545284 235 IFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTmTATTIALLSLLGLFFYLRLAYCATITL 296
Cdd:PRK12650 372 SVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGG-NAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-260 |
3.04e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.80 E-value: 3.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 92 IAISIKLGLvpfHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSLMAIA-----SAALGGWMGLNQTQ 166
Cdd:MTH00032 236 IGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITifgalTAFFAATVGLVQND 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 167 TRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYTITTSAIFFILN--------TTNTFKLSTVMTTWTKIPSLSTIFML 238
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVLIIGIEGSHNVGLFHLVNHAFFKALLFLSagsvihstTVDEQDMRKMGGLIHSIPFTYTMMLI 392
|
170 180
....*....|....*....|..
gi 523545284 239 TLLSLAGLPPLTGFLPKWLIIQ 260
Cdd:MTH00032 393 GSFSIMGLPYLTGFYSKDLILE 414
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
42-259 |
3.37e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 48.66 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 42 PRAIEASTKYFLTQAAASTLLLFSSMTNAWFS----GQWDITQL-THPMSCMLLT-------IAISIKLGLVPFHFWFPE 109
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYynatGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 110 VLQGS*MTTCLLLATIM---------KFPpITLFYLTSPSLdSTLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLG 180
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlkmgaygllRFS-LPLFPDASHEF-APIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 181 WMTI---ILNYnPNLTLITFYL--YTITTSAIFFILNT----TNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTG 251
Cdd:PRK05846 315 FVTLgifAGNQ-LGIQGAIFQMisHGLSSAALFLLVGVlydrLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
....*...
gi 523545284 252 FLPKWLII 259
Cdd:PRK05846 394 FVGEFLIL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
101-275 |
3.75e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.76 E-value: 3.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 101 VPFHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDST-----LLSLMAIASAALGGWMGLNQTQTRKVLAFSS 175
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 176 IAHLGWMTIILNYNPNLTLITFYLYTITTS----AIFFILNT----TNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLP 247
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170 180
....*....|....*....|....*...
gi 523545284 248 PLTGFLPKWLIIQELTKQELTMTATTIA 275
Cdd:PRK12647 372 PLFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
47-260 |
2.76e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 45.86 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 47 ASTKYFLTQAAASTLLLFSSMTNAWFSGQ----------WDITQLTHPMSCMLLTIAISIKLGLVPFHFWFPEV-LQGS* 115
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGStsfdydaistQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 116 MTTCLLLATIMKFPPITL------FYLTSPSLDSTLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYN 189
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 190 PNLTLITFYLYTITTSAIFFIL-----------NTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLI 258
Cdd:PRK07363 318 TQLSLLGAVAQMISHGLILALLfhlvgiverkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
..
gi 523545284 259 IQ 260
Cdd:PRK07363 398 FQ 399
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
92-259 |
3.12e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 45.68 E-value: 3.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 92 IAISIKLGLVPFHFWFPEV-LQGS*MTTCLLLATIMKFPPITLFYLTSPSLDSTLLSL------MAIASAALGGWMGLNQ 164
Cdd:MTH00226 238 LAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLapaviaMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 165 TQTRKVLAFSSIAHLGWMTIILNYNPNLTL---ITFYLYTITTSAIFFILNTTNTFKLSTVMTTWTK-----IPSLSTIF 236
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLtgsIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 523545284 237 MLTLLSLAGLPPLTGFLPKWLII 259
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
156-255 |
3.24e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 45.57 E-value: 3.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 156 LGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLItfylytittSAIFFILNTTnTFKLSTVMTT---------- 225
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLAAV---------AAIFHIINHA-TFKASLFMAAgiidhetgtr 353
|
90 100 110
....*....|....*....|....*....|....*...
gi 523545284 226 --------WTKIPSLSTIFMLTLLSLAGLPPLTGFLPK 255
Cdd:PRK12648 354 dmrrlsglRRLMPITATLAMVAAAAMAGVPLLNGFLSK 391
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
40-255 |
7.01e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 7.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 40 HHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTHP--------------MSCMLLTIAISIKLGLVPFHF 105
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselienikghplflITLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 106 WFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSPSLDST-----LLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLG 180
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 181 WMTIILNYN----PNLTLI--TFYLYTITT-SAIFFIL-----NTTNTFKLSTVMTTWTKIPSLSTIFMLTLLSLAGLPP 248
Cdd:PRK12649 316 YLMTMYGYTtyhePGLGVAaaTFHLLNHATfKACLFLVagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 523545284 249 LTGFLPK 255
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
22-260 |
9.00e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 9.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 22 WVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQ-----LTHPMSCMLLTIAISI 96
Cdd:PRK06277 126 YVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 97 KLGLV------PFHFWFPEVLQGS*MTTCLLLATIMKFPPITL-------FYLTS--PSLDSTLLSLmAIASAALGGWMG 161
Cdd:PRK06277 206 IFGLLygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifklFGGLSyfPSAQGVLIAL-SVLAMVFGVVMA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 162 LNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLYT----ITTSAIFF----ILNTTNTFKLSTVMTTWTKIPSLS 233
Cdd:PRK06277 285 LLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAinhvIYKSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVA 364
|
250 260
....*....|....*....|....*..
gi 523545284 234 TIFMLTLLSLAGLPPLTGFLPKWLIIQ 260
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
51-283 |
9.08e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 44.34 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 51 YFLTQAAASTLLLFSSMTNAWF-SGQWDITQLTHP-----MSCMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLAT 124
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFIqTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 125 IMKFPPI-----TLFYLTSPSLDSTLLSLMA-IASAALGGWMGLNQTQTRKVLAFSSIAHLG--------WMTIILNYNP 190
Cdd:PRK08667 246 VMLKVAVyglvrFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 191 NLTLITFylytitTSAIFFILNTTnTFKL-------STVMTTWTK-----------IPSLSTIFMLTLLSLAGLPPLTGF 252
Cdd:PRK08667 326 TLALLAL------GGALFHSLNHA-LFKSllfltagSVVHATGTRniekmgglvklMPYTSALFLVGAVSIAALPPFNGF 398
|
250 260 270
....*....|....*....|....*....|..
gi 523545284 253 LPKWLIIQELTKQ-ELTMTATTIALLSLLGLF 283
Cdd:PRK08667 399 ASELLLYESFFQSfSVADPLIKILLFSVLAIF 430
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
25-259 |
2.15e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 42.65 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 25 LEINTLAILPLISKSHHPRAIEASTKYFLTQAAAS------TLLLFSSMTNAWFSGQWDITQLTHPMSCMLLTIAISIKL 98
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 99 GLVPFHFWFPEVLQGS*MTTCLLLATIMK------FPPITLFYLTSPSLDSTLLSLMAIASAALGGWMGLNQTQTRKVLA 172
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVkvgvyiFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 173 FSSIAHLGWMTIILNY---NPNLTLI--TFYLYT---------ITTSAIFFILNTTNTFKLSTVMttwTKIPSLSTIFML 238
Cdd:PRK06525 302 YSTITQLGYMFFGLSLailGSRLALEgsIAYIFNhafakslffLVAGALSYSCGTRLLPRLRGVL---KKLPLVGVGFCV 378
|
250 260
....*....|....*....|.
gi 523545284 239 TLLSLAGLPPLTGFLPKWLII 259
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIF 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-263 |
2.32e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 42.63 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 19 MTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQLTH--PMSCMLLTIAISI 96
Cdd:PRK07234 117 ISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLV 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 97 KLGLVPFHFWFPEVLQGS*MTTCLLLATIM---KFPPITLFYLTSPSLDStLLSLMAIASAALGGWMGLNQTQTRKVLAF 173
Cdd:PRK07234 197 KGGIFVSGLWLPLTHSEAEPPVSALLSGVVvkaGVFPLVRCALDVPGLDL-IVRIFGVGTALLGVLFALLEKDLKRMLAF 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 174 SSIAHLGWmtiILnynpnLTLITFYLYTIT----TSAIFFI---LNTTNTFKL-STVMTTWTKIPslstiFMLTLLSLAG 245
Cdd:PRK07234 276 STISQLGF---IL-----AAPLVGGLYALAhglvKSTLFLCagaLPSRNFTELiSQMLGIGKWIP-----LTMASFSIAG 342
|
250
....*....|....*...
gi 523545284 246 LPPLTGFLPKWLIIQELT 263
Cdd:PRK07234 343 FPLLAGFVSKVLTLKNLL 360
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
13-288 |
3.21e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 42.08 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 13 ISSNHWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQWDITQ----LTHPMSCM 88
Cdd:PRK06591 132 IATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSR 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 89 LLTIAIS-------IKLGLVPFHFWFPEVLQGS*MTTCLLLATI---------MKFPPITLFYLTSPSLDSTLLSLMAIA 152
Cdd:PRK06591 212 IITIAIGffligaiLKTAFFPMHFWMMRAYNNTASVILVYLAGIstiigiyiiYKFTYIIIGYETIKTAITNFIRPIALA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 153 SAALGGWMGLNQTQTRKVLAFSSIAHLGWMTIILNYNPNLTLITFYLytittsaIFFILNTTNTFKLSTVMTTWTKIPsL 232
Cdd:PRK06591 292 TLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLL-------LADSINKIALFLIDAYNESYKREP-N 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 523545284 233 STIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLSLLGLFFYLRL 288
Cdd:PRK06591 364 KVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKM 419
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-276 |
4.20e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 42.11 E-value: 4.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 3 MSLLLGTSITISSNhWMTAWVGLEINTLAILPLISKSHHPRAIEASTKYFLTQAAASTLL-------LFSSMTNAWFSGQ 75
Cdd:PRK06589 124 LTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLflpavilIYTKTGNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 76 WDITQLTHPMSCMLLTIAIsIKLGLVPFHFWFPEVLQGS*MTTCLLLATIM----KFPPITLF-------YLTSPSLDST 144
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGI-AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVvktgLFCIYKILlyifglsYLQRIFAEFN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 145 LLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGW--MTIILNYNPNLTLITFYLYT--ITTSAIFFILNTTNTFK-- 218
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLVShsFAKICLFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 219 --LSTVMTTWTKIPSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIAL 276
Cdd:PRK06589 362 dqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
2-182 |
5.36e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 41.61 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 2 TMSLLLGTSITISSNHW---MTAW--VGLEINTLailpLISKSHHPRAIEASTKYFLTQAAASTLLLFSSMTNAWFSGQW 76
Cdd:PRK08168 106 LAGVLAAVHLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 77 DITQL-----THPMS------CMLLTIAISIKLGLVPFHFWFPEVLQGS*MTTCLLLATI--------MKFPPItlfyLT 137
Cdd:PRK08168 182 SLSALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVvnlggfvlIRFAPL----LE 257
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 523545284 138 SPSLDSTLLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWM 182
Cdd:PRK08168 258 QAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
1-262 |
6.10e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.70 E-value: 6.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 1 STMSL-LLGTSITISSNHWMTAWVGLEINTLA---ILPLISKSHHPRAIeastkyFLTQAAASTLLLFSSMTNAWF-SGQ 75
Cdd:PRK06459 76 SLYILtILGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIiSGT 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 76 WDITQLTHPMSCMLLTIAISIKLGLVPFHF--WFPEVLQGS*MTTCLLLATIMK----FPPITLFYLTSPSLDSTL-LSL 148
Cdd:PRK06459 150 TNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIPIGYFgLTI 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 149 MAIA--SAALGGWMGLNQTQTRKVLAFSSIAHLGWM-----TIILNYNPNLTLITFYLYTITTSAIFFILNTTNTFKLS- 220
Cdd:PRK06459 230 LAIGafSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILYSFAHSVAKTGLFLSSg 309
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 523545284 221 ----TVMTTWTKIPSLSTIFMLTLL--SLAGLPPLTGFLPKWLIIQEL 262
Cdd:PRK06459 310 lqekQSITYSKKIRNRWIELGLTLLasSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
87-295 |
1.55e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 40.38 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 87 CMLL---TIAISIKLGLvpfHFWFPEVLQGS*MTTCLLLATIMKFPPITLFYLTSP-----SLDSTLLSLMAIASAALGG 158
Cdd:MTH00210 214 CLLLfigAVGKSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPlfegsPLALTIVTILGALTAFFAA 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 159 WMGLNQTQTRKVLAFSSIAHLGWMTI---ILNYNPNLTLIT---FY---LYTITTSAIFFILNTTNTFKLSTVMTTwtkI 229
Cdd:MTH00210 291 TVGVVQNDLKKVIAYSTCSQLGYMVMvcgISNYSTSLFHLMnhaFFkalLFLSAGSVIHAVSDEQDMRKMGGLIKS---I 367
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 523545284 230 PSLSTIFMLTLLSLAGLPPLTGFLPKWLIIQELTKQELTMTATTIALLS-LLGLFFYLRLAYCATIT 295
Cdd:MTH00210 368 PFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
283-319 |
2.73e-03 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 35.31 E-value: 2.73e-03
10 20 30
....*....|....*....|....*....|....*..
gi 523545284 283 FFYLRLAYCATITLPPNSTNYMKQWQTNKPTNPLTTA 319
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLP 37
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-184 |
3.49e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 39.24 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523545284 47 ASTKYFLTQAAASTLLLFSSMTNAWFSGQ--WDITQLTH---PMSCMLLT-----IAISIKLGLVPFHFWFPEVL-QGS* 115
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHgEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 523545284 116 MTTCLLLATIMKFPPITLFYLTSPSLDST------LLSLMAIASAALGGWMGLNQTQTRKVLAFSSIAHLGWMTI 184
Cdd:PRK12561 218 PVSMILAGVLLKMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| |
