|
Name |
Accession |
Description |
Interval |
E-value |
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
17-510 |
0e+00 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 901.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 17 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMIIFSGNFQTNNF 96
Cdd:CHL00049 1 IFMKAFHLLLFDGSFIFPECILIFGLILLLMIDLTSDQKDIPWLYFISSTSLVMSITALLFQWREEPMISFSGNFQTNNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 97 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRS 176
Cdd:CHL00049 81 NEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 177 NEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDV 256
Cdd:CHL00049 161 NEATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 257 YEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 336
Cdd:CHL00049 241 YEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 337 IGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFG 416
Cdd:CHL00049 321 IGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 417 KLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPHVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 496
Cdd:CHL00049 401 KLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGI 480
|
490
....*....|....
gi 442568949 497 SMNPIIAIAQDTLF 510
Cdd:CHL00049 481 SMNPIIAIAQDTLF 494
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
32-509 |
9.09e-161 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 466.07 E-value: 9.09e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 32 IFPECILIFGLILLLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLC 111
Cdd:PRK02504 15 ILPEGIVILTLLGVLLVDLIGGRTASRWLPYLAIAGLGAALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVT 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 112 IPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASS 191
Cdd:PRK02504 95 LLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 192 SILVHGFSWLYGSSGGEIELQEIVNGLINTQmynSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVT 271
Cdd:PRK02504 175 AIFLYGSSLLYGLSGGSTQLSAIALALITSP---SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 272 SKVAASASATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNGGYASM 351
Cdd:PRK02504 252 SKAAGFALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVA-GTEAGYASM 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 352 ITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYF 431
Cdd:PRK02504 331 VFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYL 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 432 LVSIGLLTSVISIYYYLKIIKLLMTGRNQEITPHVRNYrrSPLRSN----NSIELSMIVCVIASTIPGISMNPIIAIAQD 507
Cdd:PRK02504 411 LVLVGLVTSVISIYYYIRVIKMMVVKEPQEMSDVVKNY--PEINWNlpgmRPLRVGLVLCVIATALAGILSNPLFTLANT 488
|
..
gi 442568949 508 TL 509
Cdd:PRK02504 489 SV 490
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
59-506 |
3.22e-120 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 360.97 E-value: 3.22e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 59 WFYFISSTSLVMSITALLFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATL 138
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 139 GGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGL 218
Cdd:COG1007 114 GMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG-SLNLAGIAAAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 219 iNTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLL 298
Cdd:COG1007 193 -AAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 299 LEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY-------------ASMITYMLFYISMNLGT 365
Cdd:COG1007 272 LAVLAVLSMTVGNLAALAQTNVKRMLAYSSI--------------AHAGYlllglaagtplgvSAALFYLLAYLFMNLGA 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 366 FACIVLFGLR-TGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISI 444
Cdd:COG1007 338 FAVILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISA 417
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442568949 445 YYYLKIIKLLMTGRNQEitphvrnyrRSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQ 506
Cdd:COG1007 418 YYYLRVVKAMYFDEPEE---------EAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
66-506 |
9.20e-100 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 308.67 E-value: 9.20e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 66 TSLVMSITALLFR-WREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEctEMAITEFLLFVLTATLGGMFLC 144
Cdd:PRK05777 43 LALLLALVALLFVlGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE--DRGRGEFYLLVLFALLGMMVMV 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 145 GANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNGLINTQMy 224
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGS-LSFAGIAKALADGSG- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 225 NSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILAI 304
Cdd:PRK05777 199 NSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIAI 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNgGYASMITYMLFYISMNLGTFACIVLFGLRTG-TDNIRD 383
Cdd:PRK05777 279 ASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAE-GYSAVLFYLLAYLFMTLGAFGVISLLRRKGGeAESISD 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLmtgrnqeit 463
Cdd:PRK05777 358 FAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIKLM--------- 428
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 442568949 464 phvrnYRRSPLRSNNSIE------LSMIVCVIASTIPGISMNPIIAIAQ 506
Cdd:PRK05777 429 -----YFDEPPRDAPVNWplsaggAVLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
51-454 |
2.84e-72 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 237.15 E-value: 2.84e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 51 TSDQKDIPWFYFISSTSLVMSITALLFRWREEPMIIFSG--NFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITE 128
Cdd:TIGR01770 24 YSRKKRNPLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGfsFFIVDNFALLIKLILLLSTLLTFFFALSYLSKEKINKFE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgE 208
Cdd:TIGR01770 104 FYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG-S 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEIVNGLiNTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPF 288
Cdd:TIGR01770 183 LNFEDLLLFL-SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFAC 368
Cdd:TIGR01770 262 FGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLF-YIFIYALMSLGAFGV 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 369 IVL--FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYY 446
Cdd:TIGR01770 341 LSLlrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFY 420
|
....*...
gi 442568949 447 YLKIIKLL 454
Cdd:TIGR01770 421 YLRVVKVM 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
146-440 |
9.13e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.18 E-value: 9.13e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLinTQMYN 225
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTG-TLSFDELSKAL--TGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 SPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASASATRIFdiPFYFSSNEWHLLLEILAI 304
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSL--LYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDsNGGYASMITYMLFYISMNLGTFACIVLFGL-RTGTDNIRD 383
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGT-IYGIQAAIFHLLTHGLFSAGLFLCAGSVIYrRVHTRNIRD 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 442568949 384 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTS 440
Cdd:pfam00361 235 YGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| Ndh2_N |
pfam19530 |
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of ... |
18-117 |
1.49e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 2 N-terminal; This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I.
Pssm-ID: 437362 [Multi-domain] Cd Length: 100 Bit Score: 138.83 E-value: 1.49e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 18 FMKAFHLLLFDGSFIFPECILIFGLILLLMIDSTSDQKDIPWFYFISSTSLVMSITALLFRWREEPMIIFSGNFQTNNFN 97
Cdd:pfam19530 1 FMKAFHLSLFYGSTIFPECILIFGLISILMIDSTSKQKDIPWLYFISSTSLLLSIFILIFRLKEEPVISFLGNFQADNFN 80
|
90 100
....*....|....*....|
gi 442568949 98 EIFQFLILLCSTLCIPLSVE 117
Cdd:pfam19530 81 KIFRIFIALCSTLCIPLSVE 100
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
138-454 |
4.92e-36 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 137.47 E-value: 4.92e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 138 LGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNG 217
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGG-LHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 218 LINTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasasatrIFDIPFYFSSNEWHL 297
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 298 LleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFACIVLFGlrTG 377
Cdd:MTH00196 156 L--IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLV-YLFIYIIMSICVFSIILALN--VY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442568949 378 TDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLL 454
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
62-451 |
8.02e-35 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 135.27 E-value: 8.02e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 62 FISSTSLVMSITALLFRWREEPMIIFSGNFQT--------NNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEF--LL 131
Cdd:COG0651 35 LASLALLALALALLLQVLAGGPLVYALGGWPApfgivlvaDRLSALFLLLTALVALAVLLYSIGYMR-HERRGRRFypLF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 132 FVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYtKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeiel 211
Cdd:COG0651 114 LLLLAGMNGAFL--TGDLFNLFVFFEVMLLASYGLVAL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGT---- 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 212 QEIVNGLINTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASATRIFDIPFYF 290
Cdd:COG0651 187 LNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRVLTLLFGAD 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 291 SSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY---------ASMITYMLFYISM 361
Cdd:COG0651 267 PALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV--------------SQIGYillglglgtPLGLAGALFHLLN 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 362 NlgTFACIVLF------GLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSI 435
Cdd:COG0651 333 H--ALAKALLFlaagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAV 410
|
410
....*....|....*.
gi 442568949 436 GLLTSVISIYYYLKII 451
Cdd:COG0651 411 LLLSSLLTLAYFVRIF 426
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
68-454 |
9.30e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 121.66 E-value: 9.30e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 68 LVMSITALLFRWREEPMIIFSGNFQTNNFNEIFQFLILLCStLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGAN 147
Cdd:MTH00199 39 LIVELNSLNLFQSDKVLDGTNGLLLTNSWIIISKIIIIIGS-ISILLMGSGETILSEGGQSSPILILIVALGSLLLVSSI 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 148 DLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIvnglintqmyNSP 227
Cdd:MTH00199 118 NWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG-ETSIQGI----------NSI 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 228 GIL-IALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasasatrIFDI--PFYFSSNewhlLLEILAI 304
Cdd:MTH00199 187 LTGdVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIG-------VFSIlvQIGPVTN----VVLICAV 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 305 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFAciVLFGLRTGTDNIRDY 384
Cdd:MTH00199 256 LSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLI-YMIIYVIMSICSFS--IILSLKLTKGLIVEV 332
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 385 AGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLL 454
Cdd:MTH00199 333 SGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQII 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-510 |
3.48e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 120.37 E-value: 3.48e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 102 FLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEA 179
Cdd:PRK08375 81 LFLLVTSILAIAALLYAIGYGEHRQTRFyaLFLLLLAGLLGALLTA--DLFNLFVFLEIMSLSSYALVAMGG-DRRALAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 180 TMKYLLMGGASSSILVHGFSWLYGSSG--GEIELQEIVNGlintqmynSPGILIALLFITVGIGFKLSLAPSHQWTPDVY 257
Cdd:PRK08375 158 ARKYLIVGLIGSTFLLIGVGLLYGVTGtlNMADLAGALAE--------NPTVVTAFGFVLLALALKAAVFPLHTWLPRAY 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 258 EGSPTPVVAFLSVT-SKVAASA----SATrIFDIPFYFSSNeWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQI 332
Cdd:PRK08375 230 PAAPPVVTALLSGLvTKVAVYAliriYFT-VFGGDFRFALG-LGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 333 GYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLA 412
Cdd:PRK08375 308 GYILLGLALLTPLALAAGLL-HLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 413 GFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGrnqeitPHVRNYRRSPLRSNNSIELSMIVCVIAST 492
Cdd:PRK08375 387 GFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFG------PPPPGSEAPKQEAPLGMLAPSLALALLSL 460
|
410
....*....|....*...
gi 442568949 493 IPGISMNPIIAIAQDTLF 510
Cdd:PRK08375 461 LLGIYAGPLLQLADAAAA 478
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-501 |
3.71e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 111.60 E-value: 3.71e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 96 FNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFV-LTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDV 174
Cdd:PRK12667 83 LGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLgLEAGMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 175 RSNEATMKYLLMGGASSSILVHGFSWLYGSSG--GEIELQEIVNGLINTQMYNSPG-----ILIALLFITVGIGFKLSLA 247
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlNMADLSAKIRGLSFPLTGGLAGnpplaLGVALALALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 248 PSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASAtRIFDIPFYFSSNE---WHLLLEILAIL---SMILGNLIAITQTSM 320
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSgLVVNVGAYAII-RFLYTIFGISPSLidfRAALSPILIILgavSAIIGALMMVVQKDV 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 321 KRMLAYSSIgqigyviigiivgdSNGGYASM---------ITYMLFYISMNlgTFACIVLF---GL---RTGTDNIRDYA 385
Cdd:PRK12667 320 KRLLAYSTI--------------SHMGYIFMgigigtqlgLAAALFHIINH--AIAKSLLFlasGVfihAAGTRDIDELA 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 386 GLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEItph 465
Cdd:PRK12667 384 GLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG--- 460
|
410 420 430
....*....|....*....|....*....|....*.
gi 442568949 466 vrnyRRSPLRSNNSIELSMIVCVIASTIPGISMNPI 501
Cdd:PRK12667 461 ----EEVEHKESPSMSVVILVLALAVLILGILALFL 492
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
82-506 |
1.65e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 109.47 E-value: 1.65e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 82 EPMIIFSGNFQ--------TNNFNEIFQFLILLCSTLCIPLSVEYI--ECTEMAITEFLLFVLTATlgGMFLCGanDLIT 151
Cdd:PRK08377 57 KPIIIMAGGWKppvginlyIGPFAALFVLIIAIVSFIMSIFSLKAVevEPIDKYAMLFLLLMLGAT--GMIATG--DIFN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 152 IFVAPECFSLCSYLLSGYTKkDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEIELQeiVNGLINTQMYNSPGILI 231
Cdd:PRK08377 133 LFVFMEITAITAYALTAYNK-TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH--IAQLAGTIDPTVAQVGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 232 ALLFItvGIGFKLSLAPSHQWTPDVYEGSPTPV-VAFLSVTSKVAASASATRIFdipFYFSSNEWHLLLE---ILAILSM 307
Cdd:PRK08377 210 ALLIF--GLAVEAELFPLNAWAPDAYQAAPHPItVMFSAFVVKAGLYAMARILY---LMQNANGWSSVLKlviIMATLTV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 308 ILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNG---GYASMITYMLFYISMnlgtFACIVLFGLRTGTDNIRDY 384
Cdd:PRK08377 285 FFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGvdaGVFHMINHAIVKALL----FLAVGYVGITLGGTEIEKF 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 385 AGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEItp 464
Cdd:PRK08377 361 EGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGEGER-- 438
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 442568949 465 hvrnyrrspLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQ 506
Cdd:PRK08377 439 ---------IRENAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
130-451 |
5.70e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 99.55 E-value: 5.70e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 130 LLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN--------EATMKYLLMGGASSSILVHGFSWL 201
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppESGLKYWILGAMSSGFYLFGCALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 202 YGSSGGEIELQEIVNGLINTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASAT 281
Cdd:MTH00198 271 FGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLT 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 282 RIFDIPfyfssnewHLLLEIlAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIivgdSNGGYASM---ITYMLFY 358
Cdd:MTH00198 351 SLVITS--------KLLLSV-AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGV----SAGTYESLqasWTYAVTY 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 359 ISMNLGTFACIVL---FGLRTGTDNIR--------------DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLF 421
Cdd:MTH00198 418 LVSALASFTVICTleeFGTRTPTSRQRdgsfgnynlvrrlvDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
330 340 350
....*....|....*....|....*....|....*..
gi 442568949 422 W----CGWQAGL--YFLVSI-GLLTSVISIYYYLKII 451
Cdd:MTH00198 498 VgsikIAFSSSLsiYYLVALfAIICTCISAFYYIRIV 534
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-329 |
8.25e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 92.47 E-value: 8.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 91 FQTNNFNEIFQFLILLCSTLCIPLSVEYI-ECTEMAITEFLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGY 169
Cdd:PRK08376 86 WEVDLFGAFMALIATIVSFLAVLYSISYMkHDTGLDKYYTLILLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 170 TKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeielqEIVNGLINTQMYNSPGIL--IALLFITVGIGFKLSLA 247
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG------TLNMAYLAVKMSENPTVVakIALALFIAGLAMKSGAV 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 248 PSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDI-PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAY 326
Cdd:PRK08376 238 PVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIyGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
...
gi 442568949 327 SSI 329
Cdd:PRK08376 318 HSV 320
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
87-446 |
1.95e-17 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 85.43 E-value: 1.95e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 87 FSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLL 166
Cdd:PRK08668 61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMM 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 167 SGYTKKDVRsnEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLINTQMYNSpgILIALLFITVGIGFKLSL 246
Cdd:PRK08668 138 VPMGKKESR--KASLKYFVLSAIGAYAMLYAIFLIY-AKTGTFDFADISQGLINDTSTGF--ALIVFLFLLAFGVAKAGI 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 247 APSHQWTPDVYEGSPTPVVAFLS-VTSK--------VAASASATRIF-DIPFYFSSNEWHLLLEILAILSMILGNLIAIT 316
Cdd:PRK08668 213 FPLHVWAPDAYSEAPQSFSAVLSgQLSKlgaygfllVLYVLPGTKLFsEFGTYRGVPLFNYILAWLGNISIIVGTLMAIL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 317 QTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASM---ITYMLFYISMNLGTFACIvlfgLRTGTDNIRDYAGLYTKDPF 393
Cdd:PRK08668 293 QEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLfhvFNHALFKGLFFLIFAAVI----YRTGTTKISEMGGLIEKMPF 368
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 442568949 394 LALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYY 446
Cdd:PRK08668 369 TFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLY 421
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
129-506 |
2.57e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 78.15 E-value: 2.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCS---YLLSGYTkkdvRSNEATMKYLLMGGASSSILVHGFSWLYGSS 205
Cdd:PRK06277 104 FLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvglVIASGTE----EAYKAALKYMILGNVAGSILLLGIGFLLAST 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 206 GgEIELQEIVNGLINTqmYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSK---VAASASATR 282
Cdd:PRK06277 178 G-TLNITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKfvlVALMLVIFK 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 283 IFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGYASM---------IT 353
Cdd:PRK06277 255 LFGGLSYFPSAQGVLIA--LSVLAMVFGVVMALLQTDYKRLLAYHAI--------------SQGGYVAAglalgtplgIV 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 354 YMLFYISMNLGTFACIVL-FGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAG- 428
Cdd:PRK06277 319 AGIFHAINHVIYKSALFLgAGIvsyRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANm 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 429 -----LYFLVSIGLLTSVISIYY--YLKIIKLLMTGRNQEItphvrnyrrsPLRSNNSIELSMIVCVIASTIPGISMNPI 501
Cdd:PRK06277 399 pelaiIMIIVSIGTFVSMMKAFYliYLKPKPEELEYKNKKV----------PKYAVFSLAVLTILCIILGLFPDLVTNYL 468
|
....*
gi 442568949 502 IAIAQ 506
Cdd:PRK06277 469 YPFAN 473
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
130-507 |
6.43e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 76.91 E-value: 6.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 130 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG- 206
Cdd:PRK12663 113 FILLLMAGVIGSFLTG--DLFNLYVWFEVMLIASFVLItlGQEREQLR---GAIKYVVLNLIGSWLFLLGIGLLYGTFGt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 207 ---GEIELQeivnglINTQMYNSPGILIALLFITVgIGFKLSLAPSHqWTPDVYEGSPTPVVA-FLSVTSKVAASAsATR 282
Cdd:PRK12663 188 lnmAHIAMR------LNDMGDTATLTTIALLFLLA-FGMKAALFPFM-WLPAAYHTPNTEVAAlFAALLTKVGIYA-LIR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 283 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNGGYASMITYMLFYISMN 362
Cdd:PRK12663 259 VFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLVHDMVVK 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 363 LGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVI 442
Cdd:PRK12663 338 TALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLI 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 442568949 443 SIYYYLKIIkLLMTGRNQeiTPHVRNYRRSPLRSnnsiELSMIVCVIASTIPGISMNPIIAIAQD 507
Cdd:PRK12663 418 TMYSLFRIF-FLAYWGDK--DGEEVNFKPIPLYR----KLPLSILAVVVIAMGIAAEPLLNLTQD 475
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
129-450 |
8.01e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 76.91 E-value: 8.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG 206
Cdd:PRK07691 112 PSVLFMLAGVNGAFLTG--DIFNLFVFFEVMLMASYVLIviGGTKIQLR---ESIKYVLINVVSSAFFVVAVAILYSVVG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 207 gEIELQEIVNGLINTQMYNSPGI-LIALLFITVgIGFKLSLAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASASAtRIF 284
Cdd:PRK07691 187 -TLNMADISVKIAELSAGQTGLItVVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIA-RTF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 285 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIgiivgdsngGYASM----ITYMLFYIS 360
Cdd:PRK07691 264 TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV---------GVAMMtesgMIGAIYYLI 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 361 MNLGTFACIVLFG----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIG 436
Cdd:PRK07691 335 HDMIVKAALFLLIgimiKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIV 414
|
330
....*....|....
gi 442568949 437 LLTSVISIYYYLKI 450
Cdd:PRK07691 415 LLSSLLVLYSVIKI 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
146-503 |
1.34e-14 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 76.34 E-value: 1.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLinTQMYN 225
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG-AIAGTLNFSELLAAA--PTILS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 SPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSvtskvaasaSAT----------RIFdiPFYFSSNEW 295
Cdd:COG1009 207 SPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG-PTPVSALLH---------AATmvkagvyllaRLS--PLFALSPVW 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 296 HLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY------ASMITYMLFYIsMNLGTF-AC 368
Cdd:COG1009 275 LTVVAIIGAITALFAALIALAQTDIKRVLAYSTV--------------SQLGYmflalgVGAYVAALFHL-LTHAFFkAL 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 369 ivLF---G---LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGL--YFLVSIGLLTS 440
Cdd:COG1009 340 --LFlgaGsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGA 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 442568949 441 VISIYYYLKIIKLLMTGRNQEITPHvrnyrrSPLRSNNSIELSMIVCVIASTIPGISMNPIIA 503
Cdd:COG1009 418 FLTAFYSFRLFFLVFFGKPRPKTPK------HPHESPWLMTLPLVVLAVLSLVLGLLLPGLLE 474
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-445 |
3.15e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 75.00 E-value: 3.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 133 VLTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSGG--- 207
Cdd:PRK12665 119 ILVAGVSNAFLAG--DLFNLYVGFEILLVASYVLltLGATAARVR---AGVTYVMVSMVSSLLFLIGIALVYAATGTlnm 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 208 ---EIELQEIVNGlinTQMynspgILIALLFITVGIgfKLSLAPSHQWTPDVYEGSPTPVVA-FLSVTSKVAASASatrI 283
Cdd:PRK12665 194 adlAVRLDELPSG---TRT-----ALFAVLLVAFGI--KAAVFPLSFWLPDSYPTAPAPVTAvFAGLLTKVGVYAI---I 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 284 FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSsigqigyviigiivgdsnggYASMITYMLFYISMN- 362
Cdd:PRK12665 261 RTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT--------------------LVSHIGYMVFGIALSt 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 363 -LGTFACIV-----------LF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCG 424
Cdd:PRK12665 321 vAGLSGAIYyvahhitvqttLFlvvGLierQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAG 400
|
330 340
....*....|....*....|....
gi 442568949 425 WQAG---LYFLVSIGLLTSVISIY 445
Cdd:PRK12665 401 AEDGtwlAWALVAGGVVTSLLTLY 424
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
129-506 |
6.89e-14 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 73.82 E-value: 6.89e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSnEATMKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:TIGR01972 110 ALLLLLEAGVIGVFL--ALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI-YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEivngLINTQMYNSPGiLIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASASATriFDIP 287
Cdd:TIGR01972 187 FDLLE----LLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLR--FNLP 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 288 -FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFY--ISMNLg 364
Cdd:TIGR01972 260 lFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVF-QMISHglITAAL- 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 365 tFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLyFLVSIGLLTSVISI 444
Cdd:TIGR01972 338 -FLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNP-VVAFLAALGIVLAA 415
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 442568949 445 YYYLKIIKLLMTGRNQeiTPHVRNYRRSPLRsnnsiELSMIVCVIASTIP-GISMNPIIAIAQ 506
Cdd:TIGR01972 416 AYMLTLYKRVFFGELS--NPEVAEFPDLNGR-----EIAVLAPLVVLILFlGLYPNPLLDLTE 471
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
146-506 |
8.41e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 73.61 E-value: 8.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 146 ANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeiELQEIVNGLINTQMYN 225
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVA-MGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITG---TLNMGDMFLIIQDLPT 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 SPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRI----FDIPFYFSSNEWHLLLEI 301
Cdd:PRK12662 205 NRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvFKANFVFTTLPFNNVFMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 302 LAILSMILGNLIAITQTSMKRMLAYSSIgQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNI 381
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSI-SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 382 RDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKII-KLLMTGRNQ 460
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVeALYFESRMV 443
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 442568949 461 EitphvRNYRRSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQ 506
Cdd:PRK12662 444 E-----SKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTLISE 484
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-328 |
3.04e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 71.91 E-value: 3.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 102 FLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATM 181
Cdd:PRK07234 71 YFILTNALVTLAVIFYCWESAKTRFFYAQLLILHGSVNAAFVCA--DLISLYVALEVLSIATFLLVAYPRTD-RAIWVGL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 182 KYLLMGGASSSILVHGFSWLYGSSGGeielqeivngLINTQMYNSPGILIALLFitVGIGFKLSLAPSHQWTPDVYEGSP 261
Cdd:PRK07234 148 RYLFYSNVAMLFYLIGAVLVYQANGT----------FAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAE 215
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 442568949 262 TPVVAFLS-VTSKVAASASATRIFDIPfyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07234 216 PPVSALLSgVVVKAGVFPLVRCALDVP------GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
175-450 |
6.31e-12 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 66.88 E-value: 6.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 175 RSNEATMKYLLMGGASSSILVHGF---SWLYGSsggeielqeivnglintQMYNSPGILIALLFITVGIGFKLSLAPSHQ 251
Cdd:MTH00041 51 RSVEATIKYFLVQAFSAAILLNGAliqAWLSGS-----------------WSINGPLNTLSSIIITLALALKLGLAPCHF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 252 WTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 331
Cdd:MTH00041 114 WFPDVLQGLPFLQGLIIATWQKIAP-------LILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 332 IGYVIIGIivgdSNGGYASmITYMLFYISMNLGTFacivLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPL 411
Cdd:MTH00041 187 LGWIIITS----AYSPNAS-IIMFLIYIIINTSIF----LIGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270
....*....|....*....|....*....|....*....
gi 442568949 412 AGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 450
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRI 296
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
128-329 |
1.30e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 67.16 E-value: 1.30e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 128 EFLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFsWLYGSSGG 207
Cdd:PRK12649 115 QYLLLFMGSMIGMVF---SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGF-LLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 208 EIELQEIVNG--LINTqMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASAS-ATRIF 284
Cdd:PRK12649 191 TYDIATILQDseLIEN-IKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLHSATMVKAGVYlVARIH 268
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 442568949 285 diPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12649 269 --PIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
129-327 |
1.32e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 67.25 E-value: 1.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGgmfLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgE 208
Cdd:PRK12647 100 YILLFMASMLG---LVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG-T 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEIVNGliNTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASasatrIFDI-- 286
Cdd:PRK12647 176 YSLSELLAS--GDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLHSATMVKAG-----IYLLar 247
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 442568949 287 --PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 327
Cdd:PRK12647 248 lnPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
129-328 |
1.59e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 66.26 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLS---GYTKKdvrsNEATMKYLLMGGASSSILVHGFSWLYGSS 205
Cdd:COG1008 115 ALLLLLEAGMIGVFL--ALDLFLFYVFWELMLIPMYFLIgiwGGERR----IYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 206 GGEI-ELQEIVNGLI--NTQMynspgiliaLLFITVGIGF--KLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAS 279
Cdd:COG1008 189 GALTfDIAELAAAPLplTAQL---------LLFLAFFIAFavKVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGYGL 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 442568949 280 AtRiFDIP-FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:COG1008 260 L-R-FALPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
133-417 |
1.67e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 66.87 E-value: 1.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 133 VLTATLGGMF-LCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASssILVhGFSWLyGSSGGE 208
Cdd:PRK12644 111 ELVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvttAGGLA--MLV-GIIIL-GQAAGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEIVNglintQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASasatrIFDI-- 286
Cdd:PRK12644 187 YRLSELLA-----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVKAG-----IYLVar 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 287 --PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItyMLFYISMNLG 364
Cdd:PRK12644 256 laPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA--MLLAHALFKA 333
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 442568949 365 TFACIVlfGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK 417
Cdd:PRK12644 334 ALFLVV--GIidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
64-328 |
3.91e-11 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 65.34 E-value: 3.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 64 SSTSLVMSITALLFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYI----ECTEMAITEFLLF--VLTAT 137
Cdd:PRK06458 38 ITLTLILALWLVFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevEHGELSPVTLRLYygMYQLF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 138 LGGMFLC-GANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgsSGGEIELQEIVN 216
Cdd:PRK06458 118 LFTMLLAlTSNNLGLMWVAIEATTLSSALLVG-IYRTRASLEAAWKYIIICSVGVAFALFGTILVY--ANAATVMGDGEM 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 217 GLINTQMYNSPGIL------IALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-----------VTSKVAASAS 279
Cdd:PRK06458 195 AILWTELLKHASLLdptlmkLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSgvllnvalyavLRYYILIDAA 274
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 442568949 280 ATRIFDIPfyfssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06458 275 IGSDFPGR----------LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
179-328 |
5.32e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 61.65 E-value: 5.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 179 ATMKYLLMGGASSSILVHGF---SWLYGSSGGEIELQEIVNGLINTQmynspgiLIALLFITVGIGFKLSLAPSHQWTPD 255
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFlgiVWLSGSTSFDYDAISTQNLSLNTQ-------LILLTGLLLGFGIKIPLVPLHTWLPD 230
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442568949 256 VY-EGSPTPVVAFLSVTSKVAASAsatrIFDIPFYFSSNEWHLLLEILAI---LSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK07363 231 AYtEASPAVAILLGGVLAKLGTYG----LLRFGLQLFPQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSS 303
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
223-478 |
6.40e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 60.67 E-value: 6.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 223 MYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatrIFDIPFYFSSNEWHLLLEIL 302
Cdd:MTH00144 77 MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP------LFLLSNFLDLYWLAYLLCVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 303 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGiivgdSNGGYASMITYMLFYISMNLGTFacivlFGLRTGTDNIR 382
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVA-----ILHGSWLMWMYFLIYIVSSGFLF-----FSLWSGDSGSM 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 383 DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTGRNQEI 462
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSK 300
|
250
....*....|....*.
gi 442568949 463 TPHVRNYRRSPLRSNN 478
Cdd:MTH00144 301 KSNSSKVLNSSIISLN 316
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
99-328 |
1.43e-09 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 60.71 E-value: 1.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 99 IFQFLILLCSTLCIPLSVEYIECTEMAITEF---LLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVR 175
Cdd:PRK12645 82 LFALLITGIGSLVVLYSIYYLSKKKEQLGNFyvyLLLFMGAMLGVVL---SDNLIVLYLFWELTSISSFLLISYWYEREA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 176 SNEATMKYLL---MGGASssiLVHGFSWLYGSsGGEIELQEIVNGLINTQmyNSPGILIALLFITVGIGFKLSLAPSHQW 252
Cdd:PRK12645 159 SRYGAQKSMLitvFGGLS---MLGGFILLYIM-TGSFSIREMIANADEIQ--NSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 253 TPDVYEgSPTPVVAFLSVTSKVAAS----ASATRIFDIpfyfsSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12645 233 LPDAME-APTPVSAYLHSATMVKAGiylvARFTPIFAG-----SQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
130-328 |
1.44e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 60.10 E-value: 1.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 130 LLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGgASSSILV----HGFSWLYGSS 205
Cdd:PRK06473 112 LLLLLNAGVSGAFL--AQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYT-AISGILIlvsfLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 206 GGEIELQEIVNGLINTQmynspgiLIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRiFD 285
Cdd:PRK06473 188 SFDYEPLRSHTLPLSTQ-------LLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLR-FG 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 442568949 286 IPFYFSSneWHLL---LEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06473 260 VGLFPEA--WVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
76-444 |
7.49e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 58.43 E-value: 7.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 76 LFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00032 61 LYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMS-DDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 156 PECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGG----EIELQEIVNGLINTQMYN------ 225
Cdd:MTH00032 140 WEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSldflTFNGGSVGSGIMDRGYYGggayes 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 --SPGILIALLFITVGIGFKLSLApSHQWTPDVYEGsPTPVVAFLSVTSKVAASASATrIFDIPFYFSSNEWHLLLEILA 303
Cdd:MTH00032 220 plAPFAIIGILLLIGCIGKSAQLG-LHTWLPDAMEG-PTPVSALIHAATMVTAGVFLM-IRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 304 ILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDS-NGGYASMITYMLFYISMNLGtfACIVLFGLRTGTDNIR 382
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGShNVGLFHLVNHAFFKALLFLS--AGSVIHSTTVDEQDMR 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 442568949 383 DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK---LHLFWCGWQAGLYFLVSIGLLTSVISI 444
Cdd:MTH00032 375 KMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKdliLELTYSGRNMGIPFGSSLLKIQGDIGI 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
102-328 |
1.33e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 57.43 E-value: 1.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 102 FLILLCS-TLCIPL-SVEYIECTEMAITEFLLFVLTA--TLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN 177
Cdd:PRK08667 82 FIILIGLvSLCVAIySLGYNEHMSSNERANLLSALTAlfILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 178 EATMKYLLMGGASSSILVHGFSWLYGSSGG-EIELQEivnglintqmYNSPGILIALLFITVGIGFKLSLAPSHQWTPDV 256
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfELSPLG----------ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 442568949 257 YEGSPTPVVAFLS-VTSKVAASASATriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK08667 232 HPASPSNVSALMSgVMLKVAVYGLVR--FLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSS 302
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
179-328 |
2.64e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 56.36 E-value: 2.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 179 ATMKYLLMGGASSSILVHGFSWLY---GSSGGEIELQEIVNGLINTQMYNspgiliaLLFITVGIGF--KLSLAPSHQWT 253
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVvvyYNATGTFDIADLLNLPLPPGVQY-------WLFLAFFIAFavKMPMFPLHTWL 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442568949 254 PDVYEGSPTPVVAFLS-VTSKVAASAsATRiFDIPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAgILLKMGAYG-LLR-FSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
129-450 |
4.55e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 54.97 E-value: 4.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKdVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 208
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 ielqeivngLINTQMYNSPGILIallfITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPF 288
Cdd:MTH00200 84 ---------WGISEMLGPLSETL----ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAP-------FALLI 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 289 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsnggYASMITYMLF--YISMNLGTF 366
Cdd:MTH00200 144 QLAPALNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLV-------YSPNLALLYLllYVIITLTVF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 367 aciVLFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYY 446
Cdd:MTH00200 217 ---LLLNL-LNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF 292
|
....
gi 442568949 447 YLKI 450
Cdd:MTH00200 293 YLRL 296
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
61-466 |
9.05e-08 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 54.76 E-value: 9.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 61 YFISSTSLVMSITALLFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTATLGG 140
Cdd:PRK12646 44 YFLIQIPSVAKLQYLSTSIPWMKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSM 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 141 MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEiELQEIVNGliN 220
Cdd:PRK12646 124 IGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN-NITEILGQ--A 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 221 TQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASASATRIFdIPFYFSSNEWHLLLE 300
Cdd:PRK12646 201 DHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLFRF-TPLLGLSNMYIYIVT 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 301 ILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI-----IVGDSNGGYASMITYMLF---YISMNLGTFACIVLF 372
Cdd:PRK12646 279 FVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLFaalFHLMNHAIFKCALFM 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 373 GL-----RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAG---------LYFLVSIGLL 438
Cdd:PRK12646 359 GVgiidhEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfslisMIIIVFIGVI 438
|
410 420
....*....|....*....|....*....
gi 442568949 439 TSVISIYYYLKIIKLLMTGR-NQEITPHV 466
Cdd:PRK12646 439 ASIFTFTYALYMVKEVFWGKyDSKVFTKK 467
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
146-328 |
2.20e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 53.35 E-value: 2.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 146 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGEielqeivnGLINTQMYN 225
Cdd:PRK06521 132 ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSY--------DFAAMRAAH 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 SPGIL--IALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAsatrIFDIPFYFSSNE---WHLLL 299
Cdd:PRK06521 204 LSPFWasLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSgVMLKVAIYG----ILRVVFDLLGAPgwwWGVLV 279
|
170 180
....*....|....*....|....*....
gi 442568949 300 EILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK06521 280 LALGAISAVLGVLYALAEHDLKRLLAYST 308
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
148-329 |
4.10e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 52.72 E-value: 4.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 148 DLITIFVAPECFSLCSYLLSG--YTKKDvrSNEATMKY----------LLMGgasssILvhGFSWLYGSsggeIELQEIV 215
Cdd:PRK07376 143 NLVQIYVFWELVGMCSYLLVGfwYDRKG--AADAAQKAfvvnrvgdfgLLLG-----IL--GLFWATGS----FDFDGIA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 216 NGLinTQMYNS---PGILIALLFITVGIG--FKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASAS-ATRIFdiPFY 289
Cdd:PRK07376 210 DRL--SELVSSgavSGWLALLLCILVFLGpmAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVFlVARMY--PVF 284
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 442568949 290 fssNEWHLLLEILAILSMI---LGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK07376 285 ---EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
129-328 |
4.67e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 52.34 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGE 208
Cdd:PRK12561 91 FLMLVLYSAQIGVFL--AQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEIVnglintqMYNSPGILIALLFITVGIGF--KLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASA----SAT 281
Cdd:PRK12561 169 FDLAELG-------AKSYPLALELLLYAGFLIAFgvKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYAlirfNVQ 241
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 442568949 282 RIFDIPFYFSSnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12561 242 MLPDAHVYFAP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
76-329 |
5.73e-07 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 52.00 E-value: 5.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 76 LFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVA 155
Cdd:MTH00020 61 LWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMR-GDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIG 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 156 PECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLIntqMYNSPGILIALLF 235
Cdd:MTH00020 140 WEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVV---SAPSSDITLICLF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 236 ITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASASATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAI 315
Cdd:MTH00020 216 LFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLL-IRSSPLFEQAPLALIIVTIVGSLTVFFAATVGL 293
|
250
....*....|....
gi 442568949 316 TQTSMKRMLAYSSI 329
Cdd:MTH00020 294 VQNDLKKVIAYSTC 307
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
100-328 |
1.41e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 51.20 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 100 FQFLILLCSTLCIPLSVEYIECTEmAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRsnEA 179
Cdd:PRK12650 84 FALLALVIGAVVFIYSARYLPRKK-GNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIARSGSGGE--AG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 180 TMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIvngLINTQMYNSPGILIALLFITVGIGF-KLSLAPSHQWTPDVYe 258
Cdd:PRK12650 161 SIRTLILTFFGGLTLLAAVAIAATQTG-TTSLSGI---LHSDVWAEKPGLTTVVAVLIAVAAFtKSAQFPFHFWLPEAM- 235
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 442568949 259 GSPTPVVAFLSVTSKVAASASATRIFDIpfYFSSNE-WHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK12650 236 AAITPVSAFLHAAAVVKAGIYLLLRFSP--VFHDVAvWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
175-328 |
5.14e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 48.38 E-value: 5.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 175 RSNEATMKYLLMGGASSSILVhgFS-----WLYGssggEIElqeivnglINTQMYNSPGILIallfiTVGIGFKLSLAPS 249
Cdd:MTH00070 51 RATEAATKYFLTQASASALIL--FSstinaWFTG----EWT--------IMNMQTPLPTIML-----TIALMMKLGIAPF 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 442568949 250 HQWTPDVYEGSPTPVVAFLSVTSKVAasaSATRIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00070 112 HFWLPEVLQGLDLTTGLILSTWQKLA---PMALLIQISHLLNSN----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSS 183
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-451 |
2.57e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.73 E-value: 2.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 87 FSGNFQTNNFNEIFQFLI---LLCSTLCIP--LSVEYIECTemaiTEFLLFVLTATLGGMFLCGANDLITIFVAPECFSL 161
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIgflWICALLYTPkyLAINNIDSS----SRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 162 CSYLLSGYTKKDVrSNEATMKYLLMGGASSSIL-VHGFSWLYGSSGgeiELQEIVNGLINTqmynSPGILIALLFItVGI 240
Cdd:PRK06589 151 STAFLIGHTRNNI-SLSGGYKYLKILMISALLLfLPAVILIYTKTG---NLDFVSGGLFSK----NQSIILLLMFI-YGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 241 GfKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-----SATRIFDIPF---YFSSNEWhllLEILAILSMILGNL 312
Cdd:PRK06589 222 A-KTAIFPVHSWLPAAMV-AHYPVSALLHAVIVVKTGLfciykILLYIFGLSYlqrIFAEFNW---LIFIPIVSIFYSSL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 313 IAITQTSMKRMLAYSSIgqigyviigiivgdSNGGYASMITYMLFYISMNLGT-------FACIVLFGL------RTGTD 379
Cdd:PRK06589 297 KALKTDNIKKILAYSTI--------------SQLSLALLSAFILTPKALGAAIlhlvshsFAKICLFYSmgsiysLKKED 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 442568949 380 NIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGL----YFLVSIGLLTSVISIYYYLKII 451
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQpwlsIIVMLVVIASSILSALYLLKIL 438
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
175-450 |
3.88e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 45.97 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 175 RSNEATMKYLLMGGASSSILVhgFS-----WLYGSsgGEIelqeivnglinTQMYNSPGILIallfITVGIGFKLSLAPS 249
Cdd:MTH00112 51 RATEAATKYFLTQAAASALIL--FSsttnaWNTGQ--WDI-----------TQLTNPTSCTL----LTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 250 HQWTPDVYEGSPTPVVAFLSVTSKVAASAsatrifdIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00112 112 HFWLPEVLQGSTTTTALILSTWQKLAPLT-------LLLMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSI 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 330 gqigyviigiivgdSNGGY-ASMITY--------MLFYISMNLGTFACIVLfglrTGTDNIRDYAGLYTKDPFLALSLAL 400
Cdd:MTH00112 185 --------------AHLGWmIAIITYspkltlltFYIYILMTTPMFLTLNT----TSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 442568949 401 CLLSLGGLPPLAGFFGKlhlfwcgW-------QAGLYFLVSIGLLTSVISIYYYLKI 450
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPK-------WlilqeltKQNMTPTATIMAMLSLLSLFFYLRL 296
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
171-451 |
4.94e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 45.58 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 171 KKDVRSNEATMKYLLMGGASSSILVhgFSwlygssggeielqeivngLINTQMYNSPGILIALLFITVGIGFKLSLAPSH 250
Cdd:MTH00160 48 KKNLMSSESSLKYFLIQALASIILL--FS------------------IILNMLNLMLFNNISSMLINSSLLLKLGAAPFH 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 251 QWTPDVYEGSPTPVVAFLSVTSKVAasasatrifdiPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00160 108 FWFPEVMEGLSWINCFILMTWQKIA-----------PLIlLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 330 GQIGYVIIGIIVGDSnggyaSMITYMLFYISMNLGtfacIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLP 409
Cdd:MTH00160 177 NHLGWMLSSMMISEN-----LWLIYFLIYSIISLS----IILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLP 247
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 442568949 410 PLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKII 451
Cdd:MTH00160 248 PFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS 289
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
130-329 |
5.72e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.16 E-value: 5.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 130 LLFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSggei 209
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 210 elqeivnglintqmynSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFY 289
Cdd:MTH00011 84 ----------------SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAP-------LSILFF 140
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 442568949 290 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSI 180
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
136-329 |
7.98e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 45.27 E-value: 7.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 136 ATLGGMFlcgANDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQE 213
Cdd:PRK12668 105 SALGAVF---AGDLLTLFVFWELMAFTSTFLvwARGTKAAVR---AGFRYLLVHVLGGVLLLAGILLHY-AETGSFAFGA 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 214 IvnglintqmynSPGILIALLFITVGIGFKLSLAPSHQWTPDVY-EGSPTPVVaFLSV-TSKVAASASAtRIFDipfyfs 291
Cdd:PRK12668 178 I-----------AGLGGTAAWLILIGFGVNAAFPPLHAWLPDAYpEATVTGSV-FLSAfTTKTAVYALA-RAFP------ 238
|
170 180 190
....*....|....*....|....*....|....*...
gi 442568949 292 snEWHLLLEILAILSmILGNLIAITQTSMKRMLAYSSI 329
Cdd:PRK12668 239 --GTELLIYIGAAMA-VYGVFFALLENDLRRLLSYHIV 273
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
129-327 |
1.25e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 44.58 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 129 FLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGE 208
Cdd:PRK06525 118 FLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 209 IELQEIvNGLintqmyNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA--------SA 280
Cdd:PRK06525 193 FALSAL-SGL------HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA-PTPASAYLHAASMVKVGVyifaraiqSM 264
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 442568949 281 TRIFDIPFYFSSnewhllleILAILSMILGNLIAITQTSMKRMLAYS 327
Cdd:PRK06525 265 GPIPHVIGYVGA--------VMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
149-329 |
2.30e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 43.73 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 149 LITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKY----------LLMGgasssILvhGFSWLYGSSggEIE-LQEIVNG 217
Cdd:CHL00025 144 LIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfvtnrvgdfgLLLG-----IL--GFYWITGSF--EFRdLFEIFNN 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 218 LINTQMYNS-PGILIA-LLFitVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAAS----ASATRIFD-IPFYF 290
Cdd:CHL00025 215 LIYNNEVNLlFATLCAfLLF--LGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGiflvARLLPLFIvIPYIM 291
|
170 180 190
....*....|....*....|....*....|....*....
gi 442568949 291 SSNEWhllleiLAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:CHL00025 292 NLISL------IGIITALLGATLALAQKDIKRGLAYSTM 324
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
171-328 |
3.15e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 42.91 E-value: 3.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 171 KKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeielQEIVnglinTQMYNSpgilIALLFITVGIGFKLSLAPSH 250
Cdd:MTH00105 47 KHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSG-----QWTI-----TKLTNP----TASTLMTIALAMKLGLAPFH 112
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 442568949 251 QWTPDVYEGSPTPVVAFLSVTSKVAASASATRIfdipfyFSSNEWHLLLeILAILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:MTH00105 113 FWVPEVTQGIPLSSGMILLTWQKLAPLSILYQI------SPSINPNLLL-TLAILSILIGGWGGLNQTQLRKILAYSS 183
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
131-451 |
3.45e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 42.74 E-value: 3.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 131 LFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgssggeie 210
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 211 lqeivnglintqmYNSPGILIALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsasatriFDIPFYF 290
Cdd:MTH00197 73 -------------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP-------LLILAFN 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 291 SSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNggyasMITYMLFYISMNLGTFaciv 370
Cdd:MTH00197 133 SSSF--MGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSI-----FMLYYLIYFVIMFMLF---- 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 371 LFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKI 450
Cdd:MTH00197 202 LFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSL 281
|
.
gi 442568949 451 I 451
Cdd:MTH00197 282 A 282
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
66-329 |
7.44e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 42.30 E-value: 7.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 66 TSLVMSITAL-LFRWREEPMIIFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLC 144
Cdd:MTH00210 50 TTLNGSATYIkLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMS-GDPHIPRFMSYLSLFTFLMIVLV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 145 GANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELqEIVNGLINTQMY 224
Cdd:MTH00210 129 TSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGT-LEF-STISSLLVTNIN 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 225 -NSPGILIALLFI-TVGIGFKLSLapsHQWTPDVYEGsPTPVVAFLSVTSKVAASasatrIFDI----PFYFSSNEWHLL 298
Cdd:MTH00210 207 kESLTIICLLLFIgAVGKSAQLGL---HTWLPDAMEG-PTPVSALIHAATMVTAG-----VFLIirsgPLFEGSPLALTI 277
|
250 260 270
....*....|....*....|....*....|.
gi 442568949 299 LEILAILSMILGNLIAITQTSMKRMLAYSSI 329
Cdd:MTH00210 278 VTILGALTAFFAATVGVVQNDLKKVIAYSTC 308
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
226-328 |
1.56e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.89 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 226 SPGIL-IALLFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNE-WHLLLEILA 303
Cdd:PRK08676 201 SPSVLgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEqFSNVLIGLG 280
|
90 100
....*....|....*....|....*
gi 442568949 304 ILSMILGNLIAITQTSMKRMLAYSS 328
Cdd:PRK08676 281 IFSIAVAAFSMLSQRNLKKLIAFSS 305
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-463 |
7.92e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 38.61 E-value: 7.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 97 NEIFQFLILLCSTLCIPLSVEYIECTEMAI-TEFLLFVLTATLGGMflcGANDLITIFVAPECFSLCSYLLSGyTKKDVR 175
Cdd:PRK06591 87 NLVLLFFLVFCHKITNQTILKYINNNRKSLfYGILLFAHTGYLGMI---ATNDFFNLYVFIEISALSSYVLIA-SGNNPK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 176 SNEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLinTQMYNSPGILIALLFITVGIGFKLSLAPSHQWTPD 255
Cdd:PRK06591 163 SLIGAFDYLIMGSIGATLILIAIGFLL-SITGSLNMTDIAAYL--QEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMR 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 256 VYEGSPTPVVAFLS-VTSKVAASASATRIFDIPFYFSSNEWHL-LLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIG 333
Cdd:PRK06591 240 AYNNTASVILVYLAgISTIIGIYIIYKFTYIIIGYETIKTAITnFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442568949 334 YVIIGIivgdSNGGYASMITYMLFYISMNlgtfaCIVLFglrtgtdNIRDYAGLYTKDPfLALSLALCLLSLGGLPPLAG 413
Cdd:PRK06591 320 YVFLLY----VTENGIIILPSLLLADSIN-----KIALF-------LIDAYNESYKREP-NKVLIIIAIICSCGLPISPL 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 442568949 414 FFGKLHLFWCGWQAGLYFLVSIGLLTSVISIYYYLKIIKLLMTgRNQEIT 463
Cdd:PRK06591 383 FFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLLLFP-TKQESH 431
|
|
| |
