|
Name |
Accession |
Description |
Interval |
E-value |
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
3127-3176 |
8.27e-16 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
:
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 73.50 E-value: 8.27e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 440216478 3127 SSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYEERRKIRARLRELMAER 3176
Cdd:pfam12510 1 EETSAASKLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
2594-2636 |
6.94e-14 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
:
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 68.11 E-value: 6.94e-14
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 440216478 2594 SDLELEIEEIFDLQRLEKLLETVASYEMRRRIRAQMRLIRKNM 2636
Cdd:pfam12510 8 KLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| PTZ00449 super family |
cl33186 |
104 kDa microneme/rhoptry antigen; Provisional |
1394-1702 |
2.78e-10 |
|
104 kDa microneme/rhoptry antigen; Provisional
The actual alignment was detected with superfamily member PTZ00449:
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 66.64 E-value: 2.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1394 PKEEDSPKYPKGPETPKSPRNDQR--------IPSIPKKGQSPVQFKTEETPRYPQEQER--YPKEPETSQYPK--ESPR 1461
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRptrpkspkLPELLDIPKSPKRPESPKSPKRPPPPQRpsSPERPEGPKIIKspKPPK 661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1462 NPK----------------------EDAETININEETTIVITKEGSKSPSPRWSPSPERRVPK-------SQQPPSPTAS 1512
Cdd:PTZ00449 662 SPKppfdpkfkekfyddyldaaaksKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKlprdeefPFEPIGDPDA 741
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1513 PSVSPVSGRKIPNEvESNFVTEKIIDCRGKTVVEKISQRP----RTPSPTTPKKNTK-PSQKIPERVPETESEPEKDSES 1587
Cdd:PTZ00449 742 EQPDDIEFFTPPEE-ERTFFHETPADTPLPDILAEEFKEEdihaETGEPDEAMKRPDsPSEHEDKPPGDHPSLPKKRHRL 820
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1588 EtkkttSVSVTKTETERRNSRTTKTKQPLPLKEPQSKvpagksPRKDSLTGRKRDSLVEETRittTTTTTRQGRKPSDTN 1667
Cdd:PTZ00449 821 D-----GLALSTTDLESDAGRIAKDASGKIVKLKRSK------SFDDLTTVEEAEEMGAEAR---KIVVDDDGTEADDED 886
|
330 340 350
....*....|....*....|....*....|....*
gi 440216478 1668 GSPSiKDRLRSSPRKQKTSPQQTRTPTPAQTRNPE 1702
Cdd:PTZ00449 887 THPP-EEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
566-1191 |
1.86e-07 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 566 YQEP--QRSPQKLREAPTPSWEQPATRRQPveedfsthgfPSVRTTTTSTRPDQPDGEVLHtsktvSRNQSANRktNTER 643
Cdd:PHA03247 2480 YRRPaeARFPFAAGAAPDPGGGGPPDPDAP----------PAPSRLAPAILPDEPVGEPVH-----PRMLTWIR--GLEE 2542
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 644 IIETQVEHPNAPSHSTPRSGSPRRSQPRDDYASSPRGPAGKPSQSRPSNTGGSTTTKTTTTSEPLTRRQLQKerevdaah 723
Cdd:PHA03247 2543 LASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPP-------- 2614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 724 rafaaslrSSSPADSTTsvgshhqtPRSSVSSNRTFRREMREGSHDSQAPSESSRissttvtRHTTGGNVTSNTIKTKTT 803
Cdd:PHA03247 2615 --------SPLPPDTHA--------PDPPPPSPSPAANEPDPHPPPTVPPPERPR-------DDPAPGRVSRPRRARRLG 2671
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 804 KPVKTASEPRSPTPKAGGSvttttttittksspspapaspttaapptsapassappdnklsqytytTTKPGDIFSLPPTT 883
Cdd:PHA03247 2672 RAAQASSPPQRPRRRAARP-----------------------------------------------TVGSLTSLADPPPP 2704
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 884 PPTINNEPTLTTTRNTTTTTTTTTTATSDNLQNHPKKSAIEPATDTDSQPIRKVKLSANEAKVVEEAPCVRRQyyqlgne 963
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA------- 2777
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 964 GENPETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETtfegrrvsqdreisideliLIEETSGAPGS 1043
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP-------------------LPPPTSAQPTA 2838
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1044 PKIPSPRAQS---------PGKPATRSQSPEKPQPR-ATPRQSPEKE--QPAFKQTHEVYtpSQPEKQFPRARSPE-KTP 1110
Cdd:PHA03247 2839 PPPPPGPPPPslplggsvaPGGDVRRRPPSRSPAAKpAAPARPPVRRlaRPAVSRSTESF--ALPPDQPERPPQPQaPPP 2916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1111 GWTQPQVSPRQSPEKQLPRAQSPEKvPAVRQPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPEKQLPKDVPQKSRQS 1190
Cdd:PHA03247 2917 PQPQPQPPPPPQPQPPPPPPPRPQP-PLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
.
gi 440216478 1191 P 1191
Cdd:PHA03247 2996 L 2996
|
|
| PTZ00449 super family |
cl33186 |
104 kDa microneme/rhoptry antigen; Provisional |
1035-1421 |
1.04e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
The actual alignment was detected with superfamily member PTZ00449:
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1035 EETSGAPGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKQfpraRSPEKTPGWTQ 1114
Cdd:PTZ00449 502 EDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKE----HKPSKIPTLSK 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1115 PQVSPRQSPEKQLPRAQSPEKVPAVRQPSVSPRqSPEK----QIPDPKTRDQGPGLPR--------ISPRQSPEKQLPKD 1182
Cdd:PTZ00449 578 KPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK-SPKLpellDIPKSPKRPESPKSPKrppppqrpSSPERPEGPKIIKS 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1183 VPQKSRQSPEKDLTNQQRREEEIFRSTITTTQKRTTNNLNEEFITNERDNQNQ----PISEKKPQIPANAEPNTKPSETI 1258
Cdd:PTZ00449 657 PKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPEtpgtPFTTPRPLPPKLPRDEEFPFEPI 736
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1259 ESPDGGFPSK----TTEVEAQPEVKESPTYRK-KGLTRRETFEDRCRQILGMEEDG----DTQGTYTERPNNEQEDVNVS 1329
Cdd:PTZ00449 737 GDPDAEQPDDieffTPPEEERTFFHETPADTPlPDILAEEFKEEDIHAETGEPDEAmkrpDSPSEHEDKPPGDHPSLPKK 816
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1330 HTTIETIQVKIEDCPND------DEDDKPRRVTET------YVVRTQPKIKVEEELFV---DVTEAEDVEilVNPSK--- 1391
Cdd:PTZ00449 817 RHRLDGLALSTTDLESDagriakDASGKIVKLKRSksfddlTTVEEAEEMGAEARKIVvddDGTEADDED--THPPEekh 894
|
410 420 430
....*....|....*....|....*....|....*..
gi 440216478 1392 -------KSPKEEDSPKYPKGPETPKSPrNDQRIPSI 1421
Cdd:PTZ00449 895 ksevrrrRPPKKPSKPKKPSKPKKPKKP-DSAFIPSI 930
|
|
| PTZ00121 super family |
cl31754 |
MAEBL; Provisional |
2080-2248 |
4.14e-04 |
|
MAEBL; Provisional
The actual alignment was detected with superfamily member PTZ00121:
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2080 RQSEPERELDEESEPELDRDTDVEDDDQTSQLETEEEITQTVTKKETLKEFKQQTKETRETRRDSKAEPEKLQKKSPQTK 2159
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2160 VKEES----ARVPKYQAKVSQKVSQWEPKKQPQREPKVTQKETPLEPKKQPLSKVKdEPEKVNKREPKVPQKESQTKLKE 2235
Cdd:PTZ00121 1661 IKAAEeakkAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK-KAEELKKAEEENKIKAEEAKKEA 1739
|
170
....*....|...
gi 440216478 2236 EPERVTKKTPQKE 2248
Cdd:PTZ00121 1740 EEDKKKAEEAKKD 1752
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
3127-3176 |
8.27e-16 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 73.50 E-value: 8.27e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 440216478 3127 SSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYEERRKIRARLRELMAER 3176
Cdd:pfam12510 1 EETSAASKLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
2594-2636 |
6.94e-14 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 68.11 E-value: 6.94e-14
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 440216478 2594 SDLELEIEEIFDLQRLEKLLETVASYEMRRRIRAQMRLIRKNM 2636
Cdd:pfam12510 8 KLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1394-1702 |
2.78e-10 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 66.64 E-value: 2.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1394 PKEEDSPKYPKGPETPKSPRNDQR--------IPSIPKKGQSPVQFKTEETPRYPQEQER--YPKEPETSQYPK--ESPR 1461
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRptrpkspkLPELLDIPKSPKRPESPKSPKRPPPPQRpsSPERPEGPKIIKspKPPK 661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1462 NPK----------------------EDAETININEETTIVITKEGSKSPSPRWSPSPERRVPK-------SQQPPSPTAS 1512
Cdd:PTZ00449 662 SPKppfdpkfkekfyddyldaaaksKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKlprdeefPFEPIGDPDA 741
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1513 PSVSPVSGRKIPNEvESNFVTEKIIDCRGKTVVEKISQRP----RTPSPTTPKKNTK-PSQKIPERVPETESEPEKDSES 1587
Cdd:PTZ00449 742 EQPDDIEFFTPPEE-ERTFFHETPADTPLPDILAEEFKEEdihaETGEPDEAMKRPDsPSEHEDKPPGDHPSLPKKRHRL 820
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1588 EtkkttSVSVTKTETERRNSRTTKTKQPLPLKEPQSKvpagksPRKDSLTGRKRDSLVEETRittTTTTTRQGRKPSDTN 1667
Cdd:PTZ00449 821 D-----GLALSTTDLESDAGRIAKDASGKIVKLKRSK------SFDDLTTVEEAEEMGAEAR---KIVVDDDGTEADDED 886
|
330 340 350
....*....|....*....|....*....|....*
gi 440216478 1668 GSPSiKDRLRSSPRKQKTSPQQTRTPTPAQTRNPE 1702
Cdd:PTZ00449 887 THPP-EEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
566-1191 |
1.86e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 566 YQEP--QRSPQKLREAPTPSWEQPATRRQPveedfsthgfPSVRTTTTSTRPDQPDGEVLHtsktvSRNQSANRktNTER 643
Cdd:PHA03247 2480 YRRPaeARFPFAAGAAPDPGGGGPPDPDAP----------PAPSRLAPAILPDEPVGEPVH-----PRMLTWIR--GLEE 2542
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 644 IIETQVEHPNAPSHSTPRSGSPRRSQPRDDYASSPRGPAGKPSQSRPSNTGGSTTTKTTTTSEPLTRRQLQKerevdaah 723
Cdd:PHA03247 2543 LASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPP-------- 2614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 724 rafaaslrSSSPADSTTsvgshhqtPRSSVSSNRTFRREMREGSHDSQAPSESSRissttvtRHTTGGNVTSNTIKTKTT 803
Cdd:PHA03247 2615 --------SPLPPDTHA--------PDPPPPSPSPAANEPDPHPPPTVPPPERPR-------DDPAPGRVSRPRRARRLG 2671
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 804 KPVKTASEPRSPTPKAGGSvttttttittksspspapaspttaapptsapassappdnklsqytytTTKPGDIFSLPPTT 883
Cdd:PHA03247 2672 RAAQASSPPQRPRRRAARP-----------------------------------------------TVGSLTSLADPPPP 2704
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 884 PPTINNEPTLTTTRNTTTTTTTTTTATSDNLQNHPKKSAIEPATDTDSQPIRKVKLSANEAKVVEEAPCVRRQyyqlgne 963
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA------- 2777
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 964 GENPETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETtfegrrvsqdreisideliLIEETSGAPGS 1043
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP-------------------LPPPTSAQPTA 2838
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1044 PKIPSPRAQS---------PGKPATRSQSPEKPQPR-ATPRQSPEKE--QPAFKQTHEVYtpSQPEKQFPRARSPE-KTP 1110
Cdd:PHA03247 2839 PPPPPGPPPPslplggsvaPGGDVRRRPPSRSPAAKpAAPARPPVRRlaRPAVSRSTESF--ALPPDQPERPPQPQaPPP 2916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1111 GWTQPQVSPRQSPEKQLPRAQSPEKvPAVRQPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPEKQLPKDVPQKSRQS 1190
Cdd:PHA03247 2917 PQPQPQPPPPPQPQPPPPPPPRPQP-PLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
.
gi 440216478 1191 P 1191
Cdd:PHA03247 2996 L 2996
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1035-1421 |
1.04e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1035 EETSGAPGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKQfpraRSPEKTPGWTQ 1114
Cdd:PTZ00449 502 EDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKE----HKPSKIPTLSK 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1115 PQVSPRQSPEKQLPRAQSPEKVPAVRQPSVSPRqSPEK----QIPDPKTRDQGPGLPR--------ISPRQSPEKQLPKD 1182
Cdd:PTZ00449 578 KPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK-SPKLpellDIPKSPKRPESPKSPKrppppqrpSSPERPEGPKIIKS 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1183 VPQKSRQSPEKDLTNQQRREEEIFRSTITTTQKRTTNNLNEEFITNERDNQNQ----PISEKKPQIPANAEPNTKPSETI 1258
Cdd:PTZ00449 657 PKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPEtpgtPFTTPRPLPPKLPRDEEFPFEPI 736
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1259 ESPDGGFPSK----TTEVEAQPEVKESPTYRK-KGLTRRETFEDRCRQILGMEEDG----DTQGTYTERPNNEQEDVNVS 1329
Cdd:PTZ00449 737 GDPDAEQPDDieffTPPEEERTFFHETPADTPlPDILAEEFKEEDIHAETGEPDEAmkrpDSPSEHEDKPPGDHPSLPKK 816
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1330 HTTIETIQVKIEDCPND------DEDDKPRRVTET------YVVRTQPKIKVEEELFV---DVTEAEDVEilVNPSK--- 1391
Cdd:PTZ00449 817 RHRLDGLALSTTDLESDagriakDASGKIVKLKRSksfddlTTVEEAEEMGAEARKIVvddDGTEADDED--THPPEekh 894
|
410 420 430
....*....|....*....|....*....|....*..
gi 440216478 1392 -------KSPKEEDSPKYPKGPETPKSPrNDQRIPSI 1421
Cdd:PTZ00449 895 ksevrrrRPPKKPSKPKKPSKPKKPKKP-DSAFIPSI 930
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2080-2248 |
4.14e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2080 RQSEPERELDEESEPELDRDTDVEDDDQTSQLETEEEITQTVTKKETLKEFKQQTKETRETRRDSKAEPEKLQKKSPQTK 2159
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2160 VKEES----ARVPKYQAKVSQKVSQWEPKKQPQREPKVTQKETPLEPKKQPLSKVKdEPEKVNKREPKVPQKESQTKLKE 2235
Cdd:PTZ00121 1661 IKAAEeakkAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK-KAEELKKAEEENKIKAEEAKKEA 1739
|
170
....*....|...
gi 440216478 2236 EPERVTKKTPQKE 2248
Cdd:PTZ00121 1740 EEDKKKAEEAKKD 1752
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
926-1184 |
1.05e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 44.76 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 926 ATDTDSQPIRKVKLSANEAKVVEEAPC----VRRQYYQLGNEGENPETPESSGTpankKPHQMRRPHDEPEpqlrrsSKS 1001
Cdd:pfam03154 49 AASTSSNDSKAESMKKSSKKIKEEAPSplksAKRQREKGASDTEEPERATAKKS----KTQEISRPNSPSE------GEG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1002 PSVEPRQVQRETTFEGRRVSQDREISidelilieetsgapgSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQ 1081
Cdd:pfam03154 119 ESSDGRSVNDEGSSDPKDIDQDNRST---------------SPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASP 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1082 PAFKQTHEVYTPSQPEKQFPRARSPEKTPGWTQPQVSP----------RQSPEKQLPRAQSPEKVPAVRQPSVSPRQSPE 1151
Cdd:pfam03154 184 PSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTqstaaphtliQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSP 263
|
250 260 270
....*....|....*....|....*....|...
gi 440216478 1152 KQIPDPKTRDQGPGLPRisPRQSPEKQLPKDVP 1184
Cdd:pfam03154 264 QPLPQPSLHGQMPPMPH--SLQTGPSHMQHPVP 294
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
3127-3176 |
8.27e-16 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 73.50 E-value: 8.27e-16
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 440216478 3127 SSSSAPVTRTTCDIEEIWDEQVLKQLLEQASTYEERRKIRARLRELMAER 3176
Cdd:pfam12510 1 EETSAASKLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| Smoothelin |
pfam12510 |
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is ... |
2594-2636 |
6.94e-14 |
|
Smoothelin cytoskeleton protein; This domain family is found in eukaryotes, and is approximately 50 amino acids in length. The family is found in association with pfam00307. Smoothelin is a cytoskeletal protein specifically expressed in differentiated smooth muscle cells and has been shown to co-localize with smooth muscle alpha actin.
Pssm-ID: 463614 [Multi-domain] Cd Length: 50 Bit Score: 68.11 E-value: 6.94e-14
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 440216478 2594 SDLELEIEEIFDLQRLEKLLETVASYEMRRRIRAQMRLIRKNM 2636
Cdd:pfam12510 8 KLTAEELEAIEDEEVLDKLLETATDYEERRLIRAAIRELRKRK 50
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1394-1702 |
2.78e-10 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 66.64 E-value: 2.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1394 PKEEDSPKYPKGPETPKSPRNDQR--------IPSIPKKGQSPVQFKTEETPRYPQEQER--YPKEPETSQYPK--ESPR 1461
Cdd:PTZ00449 582 PKDPKHPKDPEEPKKPKRPRSAQRptrpkspkLPELLDIPKSPKRPESPKSPKRPPPPQRpsSPERPEGPKIIKspKPPK 661
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1462 NPK----------------------EDAETININEETTIVITKEGSKSPSPRWSPSPERRVPK-------SQQPPSPTAS 1512
Cdd:PTZ00449 662 SPKppfdpkfkekfyddyldaaaksKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKlprdeefPFEPIGDPDA 741
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1513 PSVSPVSGRKIPNEvESNFVTEKIIDCRGKTVVEKISQRP----RTPSPTTPKKNTK-PSQKIPERVPETESEPEKDSES 1587
Cdd:PTZ00449 742 EQPDDIEFFTPPEE-ERTFFHETPADTPLPDILAEEFKEEdihaETGEPDEAMKRPDsPSEHEDKPPGDHPSLPKKRHRL 820
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1588 EtkkttSVSVTKTETERRNSRTTKTKQPLPLKEPQSKvpagksPRKDSLTGRKRDSLVEETRittTTTTTRQGRKPSDTN 1667
Cdd:PTZ00449 821 D-----GLALSTTDLESDAGRIAKDASGKIVKLKRSK------SFDDLTTVEEAEEMGAEAR---KIVVDDDGTEADDED 886
|
330 340 350
....*....|....*....|....*....|....*
gi 440216478 1668 GSPSiKDRLRSSPRKQKTSPQQTRTPTPAQTRNPE 1702
Cdd:PTZ00449 887 THPP-EEKHKSEVRRRRPPKKPSKPKKPSKPKKPK 920
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
566-1191 |
1.86e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 57.64 E-value: 1.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 566 YQEP--QRSPQKLREAPTPSWEQPATRRQPveedfsthgfPSVRTTTTSTRPDQPDGEVLHtsktvSRNQSANRktNTER 643
Cdd:PHA03247 2480 YRRPaeARFPFAAGAAPDPGGGGPPDPDAP----------PAPSRLAPAILPDEPVGEPVH-----PRMLTWIR--GLEE 2542
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 644 IIETQVEHPNAPSHSTPRSGSPRRSQPRDDYASSPRGPAGKPSQSRPSNTGGSTTTKTTTTSEPLTRRQLQKerevdaah 723
Cdd:PHA03247 2543 LASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPP-------- 2614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 724 rafaaslrSSSPADSTTsvgshhqtPRSSVSSNRTFRREMREGSHDSQAPSESSRissttvtRHTTGGNVTSNTIKTKTT 803
Cdd:PHA03247 2615 --------SPLPPDTHA--------PDPPPPSPSPAANEPDPHPPPTVPPPERPR-------DDPAPGRVSRPRRARRLG 2671
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 804 KPVKTASEPRSPTPKAGGSvttttttittksspspapaspttaapptsapassappdnklsqytytTTKPGDIFSLPPTT 883
Cdd:PHA03247 2672 RAAQASSPPQRPRRRAARP-----------------------------------------------TVGSLTSLADPPPP 2704
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 884 PPTINNEPTLTTTRNTTTTTTTTTTATSDNLQNHPKKSAIEPATDTDSQPIRKVKLSANEAKVVEEAPCVRRQyyqlgne 963
Cdd:PHA03247 2705 PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAA------- 2777
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 964 GENPETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETtfegrrvsqdreisideliLIEETSGAPGS 1043
Cdd:PHA03247 2778 GPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGP-------------------LPPPTSAQPTA 2838
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1044 PKIPSPRAQS---------PGKPATRSQSPEKPQPR-ATPRQSPEKE--QPAFKQTHEVYtpSQPEKQFPRARSPE-KTP 1110
Cdd:PHA03247 2839 PPPPPGPPPPslplggsvaPGGDVRRRPPSRSPAAKpAAPARPPVRRlaRPAVSRSTESF--ALPPDQPERPPQPQaPPP 2916
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1111 GWTQPQVSPRQSPEKQLPRAQSPEKvPAVRQPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPEKQLPKDVPQKSRQS 1190
Cdd:PHA03247 2917 PQPQPQPPPPPQPQPPPPPPPRPQP-PLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPP 2995
|
.
gi 440216478 1191 P 1191
Cdd:PHA03247 2996 L 2996
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
967-1283 |
1.80e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.17 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 967 PETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVE-PRQVQRETTFEG---------RRVSQDREISIDELilieE 1036
Cdd:PHA03247 2624 PDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSrPRRARRLGRAAQassppqrprRRAARPTVGSLTSL----A 2699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1037 TSGAPGSPKIPSPRAQSPGKP---ATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVY----TPSQPEKQF-PRARSPEK 1108
Cdd:PHA03247 2700 DPPPPPPTPEPAPHALVSATPlppGPAAARQASPALPAAPAPPAVPAGPATPGGPARParppTTAGPPAPApPAAPAAGP 2779
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1109 TPGWTQPQVSPRQSPEKQLPRAQSPEKVPAV---RQPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPEKQLPKDVP- 1184
Cdd:PHA03247 2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAvlaPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPg 2859
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1185 ------QKSRQSPEKDLTNQQRREEEIFRSTITttqkrttnnlneefitneRDNQNQPISEKKPQIPANAEPNTKPSETI 1258
Cdd:PHA03247 2860 gdvrrrPPSRSPAAKPAAPARPPVRRLARPAVS------------------RSTESFALPPDQPERPPQPQAPPPPQPQP 2921
|
330 340
....*....|....*....|....*
gi 440216478 1259 ESPDGGFPSKTTEVEAQPEVKESPT 1283
Cdd:PHA03247 2922 QPPPPPQPQPPPPPPPRPQPPLAPT 2946
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
970-1207 |
3.55e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 53.15 E-value: 3.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 970 PESSGTPaNKKPHqmrrPHDEPEPQLRRSSKSPSVEPRQVQRETTFEGRRVSQDREISIDELIL--------IEETSGAP 1041
Cdd:PHA03378 590 PSYAQTP-WPVPH----PSQTPEPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPITFNVLVFptphqppqVEITPYKP 664
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1042 GSPKIPSPRAQ-SPGKPAT---RSQSPE--KPQPRATPRQSPEKEQPAFKQthevytpsQPEKQFPRARSPEKTPGWTQP 1115
Cdd:PHA03378 665 TWTQIGHIPYQpSPTGANTmlpIQWAPGtmQPPPRAPTPMRPPAAPPGRAQ--------RPAAATGRARPPAAAPGRARP 736
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1116 qvsPRQSPEKQLPRAQSPekvPAVRQPSVSPRQSPEKQI----PDPKTRDQGPGLPRISPRQSPEKQLPKDVPQKSRQSP 1191
Cdd:PHA03378 737 ---PAAAPGRARPPAAAP---GRARPPAAAPGRARPPAAapgaPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLM 810
|
250
....*....|....*.
gi 440216478 1192 EKDLTNQQRREEEIFR 1207
Cdd:PHA03378 811 PRAAPGQQGPTKQILR 826
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1381-1768 |
5.55e-06 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 52.38 E-value: 5.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1381 EDVEILVNPSKK---SPKEEDSPKY---PKGPET----PKSP---------RNDQRIPSIPKKGQSPVQFKTEETPRYP- 1440
Cdd:PTZ00449 483 QEIKKLIKKSKKklaPIEEEDSDKHdepPEGPEAsglpPKAPgdkegeegeHEDSKESDEPKEGGKPGETKEGEVGKKPg 562
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1441 -------------QEQERYPKEPETSQYPKE-----SPRNPKEDAETININEETTIVITKegskSPSPRWSPSPERRVPK 1502
Cdd:PTZ00449 563 pakehkpskiptlSKKPEFPKDPKHPKDPEEpkkpkRPRSAQRPTRPKSPKLPELLDIPK----SPKRPESPKSPKRPPP 638
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1503 SQQPPSPTASPSVSPVSGRKIPNEVESNF---VTEKIID------CRGKTVV------EKISQRPRTPSPTTPKKNTKPS 1567
Cdd:PTZ00449 639 PQRPSSPERPEGPKIIKSPKPPKSPKPPFdpkFKEKFYDdyldaaAKSKETKttvvldESFESILKETLPETPGTPFTTP 718
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1568 QKIPERVPETESEP-----EKDSES------------------ETKKTTSVSVTKTETERRNSRTTKTKQP-LPLKEPQS 1623
Cdd:PTZ00449 719 RPLPPKLPRDEEFPfepigDPDAEQpddiefftppeeertffhETPADTPLPDILAEEFKEEDIHAETGEPdEAMKRPDS 798
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1624 KVPAGKSPRKDSLTGRKRDSLVEETRITTTTTTTRQGRKPSDTNGSPSIKDRLRSSprKQKTSPQQTRTPTPAQTRNPED 1703
Cdd:PTZ00449 799 PSEHEDKPPGDHPSLPKKRHRLDGLALSTTDLESDAGRIAKDASGKIVKLKRSKSF--DDLTTVEEAEEMGAEARKIVVD 876
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 440216478 1704 DVDGDSSSPDASPTrvgnERRRSSNISVHTEIIIDHMAPKSPKTERRSQGGTGNVPSPIRKLPVT 1768
Cdd:PTZ00449 877 DDGTEADDEDTHPP----EEKHKSEVRRRRPPKKPSKPKKPSKPKKPKKPDSAFIPSIIAIFLVS 937
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1035-1421 |
1.04e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1035 EETSGAPGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKQfpraRSPEKTPGWTQ 1114
Cdd:PTZ00449 502 EDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKE----HKPSKIPTLSK 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1115 PQVSPRQSPEKQLPRAQSPEKVPAVRQPSVSPRqSPEK----QIPDPKTRDQGPGLPR--------ISPRQSPEKQLPKD 1182
Cdd:PTZ00449 578 KPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK-SPKLpellDIPKSPKRPESPKSPKrppppqrpSSPERPEGPKIIKS 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1183 VPQKSRQSPEKDLTNQQRREEEIFRSTITTTQKRTTNNLNEEFITNERDNQNQ----PISEKKPQIPANAEPNTKPSETI 1258
Cdd:PTZ00449 657 PKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPEtpgtPFTTPRPLPPKLPRDEEFPFEPI 736
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1259 ESPDGGFPSK----TTEVEAQPEVKESPTYRK-KGLTRRETFEDRCRQILGMEEDG----DTQGTYTERPNNEQEDVNVS 1329
Cdd:PTZ00449 737 GDPDAEQPDDieffTPPEEERTFFHETPADTPlPDILAEEFKEEDIHAETGEPDEAmkrpDSPSEHEDKPPGDHPSLPKK 816
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1330 HTTIETIQVKIEDCPND------DEDDKPRRVTET------YVVRTQPKIKVEEELFV---DVTEAEDVEilVNPSK--- 1391
Cdd:PTZ00449 817 RHRLDGLALSTTDLESDagriakDASGKIVKLKRSksfddlTTVEEAEEMGAEARKIVvddDGTEADDED--THPPEekh 894
|
410 420 430
....*....|....*....|....*....|....*..
gi 440216478 1392 -------KSPKEEDSPKYPKGPETPKSPrNDQRIPSI 1421
Cdd:PTZ00449 895 ksevrrrRPPKKPSKPKKPSKPKKPKKP-DSAFIPSI 930
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
921-1463 |
2.81e-05 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.08 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 921 SAIEPATDTDSQPIRKVKLSAN--EAKVVEEAPCVRRQYYQLGNEGENPETPESSGTPANKKPHQMRRPHDE----PEPQ 994
Cdd:PRK10263 324 AAATTATQSWAAPVEPVTQTPPvaSVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEplqqPVQP 403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 995 LRRSSKSPSVEPRQVQRETTFEGRRVSQDREISIDELILIEETSGA--PGSPKIPSPRAQSPGK-PATRSQSPEKPQPRA 1071
Cdd:PRK10263 404 QQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAeeQQSTFAPQSTYQTEQTyQQPAAQEPLYQQPQP 483
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1072 TPRQSPEKEQPAFKQTHevytPSQP------EKQFPRARSPEKTPGWTQPQVSPRQSPEKQLP--RAQSPEKVPAVRQ-P 1142
Cdd:PRK10263 484 VEQQPVVEPEPVVEETK----PARPplyyfeEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSslKAPSVAAVPPVEAaA 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1143 SVSPRQSPEKQ----------IPDPKTRDQGPGLPRISPRQSPEKQLPKdvPQKSRQSPEKDLTN------QQRREEEIF 1206
Cdd:PRK10263 560 AVSPLASGVKKatlatgaaatVAAPVFSLANSGGPRPQVKEGIGPQLPR--PKRIRVPTRRELASygiklpSQRAAEEKA 637
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1207 RSTITTTQKRTTNNLNEEFITNERDNQNQPISEKKPQIPANAEPNTKPSETIESPDGGfpskttEVEAQPEVKESPTYRK 1286
Cdd:PRK10263 638 REAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAA------EAELARQFAQTQQQRY 711
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1287 KGltrretfedrcrqilgmeedgdtqgtytERPNNEQEdVNVSHTTIETIQVKIEDCPNddeddkprrvtetyvvrtqpk 1366
Cdd:PRK10263 712 SG----------------------------EQPAGANP-FSLDDFEFSPMKALLDDGPH--------------------- 741
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1367 ikveEELFVDVTEAEDVEILVNPSKKSPKEEDSPKYPKG----PETPKSPRNDQRIPSIPKKGQSpvQFKTEETPRYPQE 1442
Cdd:PRK10263 742 ----EPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPqyqqPQQPVAPQPQYQQPQQPVAPQP--QYQQPQQPVAPQP 815
|
570 580
....*....|....*....|.
gi 440216478 1443 QERYPKEPETSQYPKESPRNP 1463
Cdd:PRK10263 816 QYQQPQQPVAPQPQYQQPQQP 836
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2080-2248 |
4.14e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2080 RQSEPERELDEESEPELDRDTDVEDDDQTSQLETEEEITQTVTKKETLKEFKQQTKETRETRRDSKAEPEKLQKKSPQTK 2159
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2160 VKEES----ARVPKYQAKVSQKVSQWEPKKQPQREPKVTQKETPLEPKKQPLSKVKdEPEKVNKREPKVPQKESQTKLKE 2235
Cdd:PTZ00121 1661 IKAAEeakkAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKK-KAEELKKAEEENKIKAEEAKKEA 1739
|
170
....*....|...
gi 440216478 2236 EPERVTKKTPQKE 2248
Cdd:PTZ00121 1740 EEDKKKAEEAKKD 1752
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
940-1190 |
4.19e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 4.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 940 SANEAKVVEEAPCVRRQYYQLGNEGENPETPESSGTPANKKPHQMRRPhdepepqlrrSSKSPSVEPRQVQRETTFEGRR 1019
Cdd:PRK12323 376 TAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAP----------ARRSPAPEALAAARQASARGPG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1020 VSQdreisideliliEETSGAPGSP--KIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSqpe 1097
Cdd:PRK12323 446 GAP------------APAPAPAAAPaaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPA--- 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1098 kqfPRARSPEKTPGWTQPQVSPRQSPEKQLPRAQSPEKVPAvrqPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPE- 1176
Cdd:PRK12323 511 ---PAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAA---PAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPAl 584
|
250
....*....|....*..
gi 440216478 1177 -KQLP-KDVPQK-SRQS 1190
Cdd:PRK12323 585 aARLPvRGLAQQlARQS 601
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
961-1157 |
4.54e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 4.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 961 GNEGENPETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETTFEGRRVSQDREISIDELILIEETSGA 1040
Cdd:PHA03307 250 GPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSST 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1041 PGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKqfPRARSPEKTPGWTQ--PQVS 1118
Cdd:PHA03307 330 SSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTR--RRARAAVAGRARRRdaTGRF 407
|
170 180 190
....*....|....*....|....*....|....*....
gi 440216478 1119 PRQSPEKQLPRAQSPEKVPAVRQPSVSPRQSPEKQIPDP 1157
Cdd:PHA03307 408 PAGRPRPSPLDAGAASGAFYARYPLLTPSGEPWPGSPPP 446
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
1041-1127 |
5.00e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 46.23 E-value: 5.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1041 PGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKQFPRARSPEKT----PGWTQPQ 1116
Cdd:PRK10263 755 PQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPvapqPQYQQPQ 834
|
90
....*....|.
gi 440216478 1117 VSPRQSPEKQL 1127
Cdd:PRK10263 835 QPVAPQPQDTL 845
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1034-1146 |
6.70e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1034 IEETSGAPGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAfkQTHEVYTPSQPEKQFPRARSPEKTPG-W 1112
Cdd:PRK07764 392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAP--PSPAGNAPAGGAPSPPPAAAPSAQPApA 469
|
90 100 110
....*....|....*....|....*....|....
gi 440216478 1113 TQPQVSPRQSPEKQLPRAQSPEKVPAVRQPSVSP 1146
Cdd:PRK07764 470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAP 503
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
1047-1180 |
8.94e-04 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 8.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1047 PSPRAQSPG-KPATRSQSPEKPQPRATPRQSPEKEQPAFKQTHEVYTPSQPEKQFPRARSPEktPGWTQPQVSPRQSPEK 1125
Cdd:PRK10263 740 PHEPLFTPIvEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQ--PQYQQPQQPVAPQPQY 817
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 440216478 1126 QLPRaQSPEKVPAVRQPSVSPRQSPEKQIPDPKTRDQGPGlpriSPRQSPEKQLP 1180
Cdd:PRK10263 818 QQPQ-QPVAPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDS----RPLHKPTTPLP 867
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
1040-1193 |
9.37e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 9.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1040 APGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAfkqthevytpsQPEKQFPRARSPEKTPGWTQPQVSP 1119
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAA-----------RAVAAAPARRSPAPEALAAARQASA 441
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 440216478 1120 RQS-PEKQLPRAQSPEKVPAVRQPSVSPRQSPEKQIPDPKTRDQGPGLPRISPRQSPEKQLPKDVPQKSRQSPEK 1193
Cdd:PRK12323 442 RGPgGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDA 516
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
926-1184 |
1.05e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 44.76 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 926 ATDTDSQPIRKVKLSANEAKVVEEAPC----VRRQYYQLGNEGENPETPESSGTpankKPHQMRRPHDEPEpqlrrsSKS 1001
Cdd:pfam03154 49 AASTSSNDSKAESMKKSSKKIKEEAPSplksAKRQREKGASDTEEPERATAKKS----KTQEISRPNSPSE------GEG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1002 PSVEPRQVQRETTFEGRRVSQDREISidelilieetsgapgSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQ 1081
Cdd:pfam03154 119 ESSDGRSVNDEGSSDPKDIDQDNRST---------------SPSIPSPQDNESDSDSSAQQQILQTQPPVLQAQSGAASP 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1082 PAFKQTHEVYTPSQPEKQFPRARSPEKTPGWTQPQVSP----------RQSPEKQLPRAQSPEKVPAVRQPSVSPRQSPE 1151
Cdd:pfam03154 184 PSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTqstaaphtliQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSP 263
|
250 260 270
....*....|....*....|....*....|...
gi 440216478 1152 KQIPDPKTRDQGPGLPRisPRQSPEKQLPKDVP 1184
Cdd:pfam03154 264 QPLPQPSLHGQMPPMPH--SLQTGPSHMQHPVP 294
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
2080-2254 |
1.46e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2080 RQSEPERELDEESEPELDRDTDVEDDDQTSQLETEEEitQTVTKKETLKefKQQTKETRETRRDSKAEPEKLQKKSPQTK 2159
Cdd:PTZ00121 1621 KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEE--ENKIKAAEEA--KKAEEDKKKAEEAKKAEEDEKKAAEALKK 1696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 2160 VKEESARVPKYQAKVSQKVSQWEP--KKQPQREPKVTQ-KETPLEPKKQPLSKVKDEPEKVNKREPKVPQKESQTKLKEE 2236
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEElkKAEEENKIKAEEaKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKE 1776
|
170
....*....|....*...
gi 440216478 2237 PERVTKKTPQKEPRKEPL 2254
Cdd:PTZ00121 1777 KEAVIEEELDEEDEKRRM 1794
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1033-1200 |
1.55e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1033 LIEETSGAPGSPKIPSPRAQSPGKPaTRSQSPEKPQPRatprqspekeqpafkqthevytPSQPEKQfPRARSPEKTPGW 1112
Cdd:PHA03247 2540 LEELASDDAGDPPPPLPPAAPPAAP-DRSVPPPRPAPR----------------------PSEPAVT-SRARRPDAPPQS 2595
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1113 TQPQ--VSPRQSPEKQLPRAQSPEKVPAVRQPSVSPRQSPEKqipdpktrdqgpgLPRISPRQSPEKQLPKDVPQKSRQS 1190
Cdd:PHA03247 2596 ARPRapVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANE-------------PDPHPPPTVPPPERPRDDPAPGRVS 2662
|
170
....*....|
gi 440216478 1191 PEKDLTNQQR 1200
Cdd:PHA03247 2663 RPRRARRLGR 2672
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
967-1194 |
2.29e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 967 PETPESSGTPANKKPHQMRRPHDEPEPQLRRSSKSPSVEPRQVQRETTfegrrvsQDREISiDELILIEETSGAPGSPKI 1046
Cdd:PHA03307 120 TPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAA-------SSRQAA-LPLSSPEETARAPSSPPA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1047 PSPRAQSPGKPATRSQSPEKP--QPRATPRQSPEKEQ---PAFKQTHEVYTPSQPEKQFPRARSPEKTPGwtqPQVSPRQ 1121
Cdd:PHA03307 192 EPPPSTPPAAASPRPPRRSSPisASASSPAPAPGRSAaddAGASSSDSSSSESSGCGWGPENECPLPRPA---PITLPTR 268
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 440216478 1122 spekqlPRAQSPEKVPAVRQPSVSPRQSPekQIPDPKTRDQGPGLPRISPRQSPEKQL---PKDVPQKSRQSPEKD 1194
Cdd:PHA03307 269 ------IWEASGWNGPSSRPGPASSSSSP--RERSPSPSPSSPGSGPAPSSPRASSSSsssRESSSSSTSSSSESS 336
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
479-750 |
2.34e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 479 PTSRVVQKAPTPSYAPPSHSPRQSPAkdfSTHGFPSVRPNKATQEYPSQRPGIAGEEVVVVRSEKSRQVKQQTSSQRTIE 558
Cdd:PHA03307 175 PLSSPEETARAPSSPPAEPPPSTPPA---AASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 559 TEVVGDDYQEPQRSPQKLREAPTpsWEQPATRRQPVEEDfsthgfPSVRTTTTSTRPDQPDGEVLHTSKTVSRNQSANRK 638
Cdd:PHA03307 252 ENECPLPRPAPITLPTRIWEASG--WNGPSSRPGPASSS------SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 639 TNTERIIETqvehPNAPSHSTPRSGSPRRSQPRDDYASSPRGPAGKPSQSRPSNTGGSTTTKTTTTSEPLTRRQLQKERE 718
Cdd:PHA03307 324 SSSSSTSSS----SESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRAR 399
|
250 260 270
....*....|....*....|....*....|..
gi 440216478 719 VDAAHRAFAASLRSSSPADSTTSVGSHHQTPR 750
Cdd:PHA03307 400 RRDATGRFPAGRPRPSPLDAGAASGAFYARYP 431
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1037-1204 |
4.30e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 4.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1037 TSGAPGSPKIPSPRAQSPGKPATRSQSPEKPQPRATPRQSPEKEQPAFK--QTHEVYTPSQPEKQFPRARSPEKTPGWTQ 1114
Cdd:PRK07764 617 APAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGgdGWPAKAGGAAPAAPPPAPAPAAPAAPAGA 696
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 440216478 1115 PQVSPRQSPEKQLPRAQSPEKV---PAVRQPSVSPRQSPEKQIPDPKTRDQGPGlPRISPRQSPEKQLPKDVPQKSRQSP 1191
Cdd:PRK07764 697 APAQPAPAPAATPPAGQADDPAaqpPQAAQGASAPSPAADDPVPLPPEPDDPPD-PAGAPAQPPPPPAPAPAAAPAAAPP 775
|
170
....*....|...
gi 440216478 1192 EKDLTNQQRREEE 1204
Cdd:PRK07764 776 PSPPSEEEEMAED 788
|
|
| |
