|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 748.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00131 6 KTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00131 86 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00131 166 GGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00131 246 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00131 326 WTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-368 |
4.04e-115 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 340.23 E-value: 4.04e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 17 PAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 96
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 97 LYYGSylYKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTR 172
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 173 FFAF-HFLFPFIIAAATMVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGLAILLIALISLALFSPNllGD 247
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 248 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWLLVA 325
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 393689000 326 DVAILTWMGGMPVehPFVIIGQIASFLYFFLFLILAPLSGWLE 368
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
2.35e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 265.00 E-value: 2.35e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 4 PLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 84 FFFICIYLHIGRGLYYGSY--LYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 393689000 162 GFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
1.10e-81 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 247.68 E-value: 1.10e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 13 LVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 93 IGRGLYYG--SYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 393689000 171 TRFFAFHFLFPFIIAAATMVHLIFLHETG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
253-334 |
6.53e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 6.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTF-RPI--TQFLFWLLVAdvai 329
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVatTVFLFGTVVA---- 140
|
....*
gi 393689000 330 lTWMG 334
Cdd:TIGR01156 141 -LWLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 748.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00131 6 KTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00131 86 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00131 166 GGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00131 246 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00131 326 WTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 668.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00119 7 KSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00119 87 GASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00119 167 GGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00119 247 SPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00119 327 WTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 659.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00074 7 KTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00074 87 GASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00074 167 GGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00074 247 SPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00074 327 WLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-374 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 650.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00100 6 KTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00100 86 GASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00100 166 GGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00100 246 SPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00100 326 WLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-350 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 626.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00191 3 KTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHAN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00191 83 GASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00191 163 GGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00191 243 SPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVF 322
|
330 340 350
....*....|....*....|....*....|
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIAS 350
Cdd:MTH00191 323 WLWVANFILLTWLGGQPVEDPFILLGQISS 352
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
6-348 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 595.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 6 LKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFF 85
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 86 FICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSV 165
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 166 DNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALFSPNLL 245
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 246 GDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWLLVA 325
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340
....*....|....*....|...
gi 393689000 326 DVAILTWMGGMPVEHPFVIIGQI 348
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQI 343
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-372 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 577.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00034 6 KSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHAN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00034 86 GASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIW 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00034 166 GGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00034 246 FPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAF 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKIL 372
Cdd:MTH00034 326 WLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-372 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 562.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00145 7 KSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00145 87 GASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00145 167 GGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLF 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00145 247 FPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILaPLSGWLENKIL 372
Cdd:MTH00145 327 WIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLIL-PLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-348 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 540.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00016 7 KTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00016 87 GASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00016 167 GGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00016 247 WPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILF 326
|
330 340
....*....|....*....|....*...
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQI 348
Cdd:MTH00016 327 WLLVSNFLLLTWIGGRPVEPPYEFLGQI 354
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-372 |
8.64e-179 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 501.54 E-value: 8.64e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00022 5 KENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHAN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00022 85 GASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00022 165 GGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYF 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00022 245 APNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAF 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKIL 372
Cdd:MTH00022 325 WFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-375 |
2.70e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 484.98 E-value: 2.70e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 1 KTHPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHAN 80
Cdd:MTH00053 7 KENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHAN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 81 GASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:MTH00053 87 GASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALF 240
Cdd:MTH00053 167 GGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 241 SPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLF 320
Cdd:MTH00053 247 FPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 393689000 321 WLLVADVAILTWMGGMPVEHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEWY 375
Cdd:MTH00053 327 WFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLKLV 381
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
2-348 |
9.94e-171 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 480.96 E-value: 9.94e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 2 THPLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANG 81
Cdd:MTH00224 8 THPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANG 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 82 ASFFFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWG 161
Cdd:MTH00224 88 ASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 162 GFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALFS 241
Cdd:MTH00224 168 GFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 242 PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFW 321
Cdd:MTH00224 248 PNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFW 327
|
330 340
....*....|....*....|....*..
gi 393689000 322 LLVADVAILTWMGGMPVEHPFVIIGQI 348
Cdd:MTH00224 328 LLVTSWAILTWIGGRPVEDPFEGIGQV 354
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
5-374 |
1.86e-129 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 376.59 E-value: 1.86e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 5 LLKIANDaLVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASF 84
Cdd:MTH00033 8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 85 FFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFS 164
Cdd:MTH00033 87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 165 VDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALFS--P 242
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 243 NLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWL 322
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWF 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 393689000 323 LVADVAILTWMGGMPV-EHPFVIIGQIASFLYFFLFLILAPLSGWLENKILEW 374
Cdd:MTH00033 327 IVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFYEY 379
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
10-350 |
2.09e-116 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 342.30 E-value: 2.09e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 10 NDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICI 89
Cdd:MTH00086 4 NSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 90 YLHIGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNAT 169
Cdd:MTH00086 84 YLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSAT 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 170 LTRFFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDlLGLAILLIALISLALFSPNLLGDPD 249
Cdd:MTH00086 164 LKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDPE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 250 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQrglTFRPITQFLFWLLVADVAI 329
Cdd:MTH00086 243 MFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVVNVI 319
|
330 340
....*....|....*....|.
gi 393689000 330 LTWMGGMPVEHPFVIIGQIAS 350
Cdd:MTH00086 320 LSWLGQCLVEYPFLFLSQIFS 340
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
17-368 |
4.04e-115 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 340.23 E-value: 4.04e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 17 PAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRG 96
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 97 LYYGSylYKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTR 172
Cdd:COG1290 111 FFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 173 FFAF-HFLFPFIIAAATMVHLIFLHETGSNNPTG----LNSDADKISFHPYFSYKDLLGLAILLIALISLALFSPNllGD 247
Cdd:COG1290 189 FFALhVLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NP 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 248 PDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWLLVA 325
Cdd:COG1290 267 PPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIV 346
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 393689000 326 DVAILTWMGGMPVehPFVIIGQIASFLYFFLFLILAPLSGWLE 368
Cdd:COG1290 347 FFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
4-201 |
2.35e-88 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 265.00 E-value: 2.35e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 4 PLLKIANDALVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGAS 83
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 84 FFFICIYLHIGRGLYYGSY--LYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWG 161
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 393689000 162 GFSVDNATLTRFFAFHFLFPFIIAAATMVHLIFLHETGSN 201
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
13-350 |
1.78e-83 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 257.99 E-value: 1.78e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 13 LVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 92
Cdd:MTH00046 9 LIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 93 IGRGLYYGSYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTR 172
Cdd:MTH00046 89 MGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVR 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 173 FFAFHFLFPFIIAAATMVHLIFLHETGSNNPTGL-NSDADKISFHPYFSYKDLLGLAILLIALISLALFSPNLLGDPDNF 251
Cdd:MTH00046 169 VFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAY 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 252 TPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLFSILVLMVVPilhtSKQRGLTFRPITQFLFWLLVADVAILT 331
Cdd:MTH00046 249 LEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLIVSLFFSLS 323
|
330
....*....|....*....
gi 393689000 332 WMGGMPVEHPFVIIGQIAS 350
Cdd:MTH00046 324 YLGGCHPEYPYLLISQLFS 342
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
13-199 |
1.10e-81 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 247.68 E-value: 1.10e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 13 LVDLPAP*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLH 92
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 93 IGRGLYYG--SYLYKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATL 170
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 393689000 171 TRFFAFHFLFPFIIAAATMVHLIFLHETG 199
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
202-349 |
1.93e-52 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 170.90 E-value: 1.93e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 202 NPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 281
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 393689000 282 KLGGVLALLFSILVLMVVPILHTSKQRGlTFRPITQFLFWLLVADVAILTWMGGMPVEHPFVIIGQIA 349
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
253-350 |
3.98e-47 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 155.71 E-value: 3.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPITQFLFWLLVADVAILTW 332
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90
....*....|....*...
gi 393689000 333 MGGMPVEHPFVIIGQIAS 350
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIAT 98
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
83-248 |
2.01e-39 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 138.14 E-value: 2.01e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 83 SFFFICIYLHIGRGLYYGSYLYKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIW 160
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 161 GGFSVDNATLTRFFAF-HFLFPFIIAAATMVHLIFLHETGSNNPTGLNSDADKISFHPYFSYKDLLGLAILLIALISLAL 239
Cdd:pfam13631 81 GGPFPGTATIPRFYALhILLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 393689000 240 FSPNLLGDP 248
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
28-172 |
3.71e-33 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 123.28 E-value: 3.71e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 28 FGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLYYGSYLYKE- 106
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 393689000 107 -TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTR 172
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTR 190
|
|
| petB |
CHL00070 |
cytochrome b6 |
19-203 |
9.18e-28 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 108.65 E-value: 9.18e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 19 P*NISVW*NFGSLLGLCLAAQILTGLFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFFFICIYLHIGRGLY 98
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 99 YGSYLYKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYIGNSLVQWIWGGFSVDNATLTRFFAF 176
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 393689000 177 HFLFPFIIAAATMV-HLIFLHETGSNNP 203
Cdd:CHL00070 187 HTFVLPLLTAVFMLmHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
253-324 |
1.82e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 59.04 E-value: 1.82e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 393689000 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFR---PITQFLFWLLV 324
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFRrpvATAVFLFGTLV 140
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
253-334 |
3.43e-10 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 58.09 E-value: 3.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPIL-HTSKQRGLTFRPI--TQFLFWLLVAdvai 329
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVatTVFLIGTAVA---- 140
|
....*
gi 393689000 330 lTWMG 334
Cdd:CHL00058 141 -LWLG 144
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
253-334 |
6.53e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.50 E-value: 6.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 393689000 253 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTF-RPI--TQFLFWLLVAdvai 329
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVatTVFLFGTVVA---- 140
|
....*
gi 393689000 330 lTWMG 334
Cdd:TIGR01156 141 -LWLG 144
|
|
| |
