|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
468-1240 |
1.65e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.41 E-value: 1.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 468 KLQQEEVQKK--NAEQAVTQLKVQLQEAERRW-------EEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTD 538
Cdd:TIGR02168 171 KERRKETERKleRTRENLDRLEDILNELERQLkslerqaEKAERYKELKAELRELELALLVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 539 tLVSKQQLEQRLMQLMESEQKRVNKE-ESLQMQVQDILEQNEALKAQIQQFHSQIAAQtsaSVLAEELHKVIAEKDKQIK 617
Cdd:TIGR02168 251 -AEEELEELTAELQELEEKLEELRLEvSELEEEIEELQKELYALANEISRLEQQKQIL---RERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 618 QTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKM 697
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 698 EEFKILNDQNKALKLEVQKLQTLVSEQPNKDV---VEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSS 774
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKKLEEAELKELqaeLEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 775 LTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKE------------KTVQDLKQEIKALK 842
Cdd:TIGR02168 487 LQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEaalggrlqavvvENLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 843 E-EIGNVQLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWL------QDLQEENESLKAHVQEVA 915
Cdd:TIGR02168 567 QnELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLggvlvvDDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 916 QHNL------KEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQAS 989
Cdd:TIGR02168 647 IVTLdgdlvrPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 990 SFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFPKVSVPSNL--SYSEWLH 1067
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEElkALREALD 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1068 GFEKKAKecmagtsgseEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIK 1147
Cdd:TIGR02168 807 ELRAELT----------LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELE 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1148 QMQSSFTSSEQELERLRRE----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQN------ 1217
Cdd:TIGR02168 877 ALLNERASLEEALALLRSEleelSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSltleea 956
|
810 820
....*....|....*....|....*
gi 383418275 1218 --ERQKVAGDLHKAQQSLELIQSKI 1240
Cdd:TIGR02168 957 eaLENKIEDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
679-1300 |
4.57e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.87 E-value: 4.57e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 679 DDKIRLLEEQLQH--EISNKMEEFKILNDQNKALKLEVQ--KLQTLVSE-QPNKDVVEQMEKCIQEKDEKLKTVEELLET 753
Cdd:TIGR02168 192 EDILNELERQLKSleRQAEKAERYKELKAELRELELALLvlRLEELREElEELQEELKEAEEELEELTAELQELEEKLEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 754 GLIQVATKEEELNAIRTENSSLTKEVQDLKA-KQNDQVSFASLVEELKkvihEKDGKIKSVEELLEAELLKVANKEKTVQ 832
Cdd:TIGR02168 272 LRLEVSELEEEIEELQKELYALANEISRLEQqKQILRERLANLERQLE----ELEAQLEELESKLDELAEELAELEEKLE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 833 DLKQEIKALKEEIGNVQLEKAQQLS----ITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESL- 907
Cdd:TIGR02168 348 ELKEELESLEAELEELEAELEELESrleeLEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELl 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 908 --------KAHVQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDL---SSKTKLLQDVQDENKLFKSQ 976
Cdd:TIGR02168 428 kkleeaelKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELaqlQARLDSLERLQENLEGFSEG 507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 977 IEQLKQQNYQQASSFPPHEELLKVISEREKEISG---------LWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVL 1047
Cdd:TIGR02168 508 VKALLKNQSGLSGILGVLSELISVDEGYEAAIEAalggrlqavVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQ 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1048 -KKLFPKVSVPSNLSYSEWLHGFEKKAKECMAGTSG----SEEVKVLEHKLKEADEMHTLLQLECE----KYKSVLAETE 1118
Cdd:TIGR02168 588 gNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvlvVDDLDNALELAKKLRPGYRIVTLDGDlvrpGGVITGGSAK 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1119 GILQKLQRSVEQEENKwkvkvdeshKTIKQMQSSFTSSEQELERLRRENKDIEN----LRREREHLEMELEKAEMERSTY 1194
Cdd:TIGR02168 668 TNSSILERRREIEELE---------EKIEELEEKIAELEKALAELRKELEELEEeleqLRKELEELSRQISALRKDLARL 738
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1195 VTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDITVIENSDVSPETESSEKETMSVSLNQT 1274
Cdd:TIGR02168 739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
650 660
....*....|....*....|....*.
gi 383418275 1275 VTQLQQLLQAVNQQLTKEKEHYQVLE 1300
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLE 844
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
446-983 |
2.97e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.59 E-value: 2.97e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 446 AELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 525
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 526 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 605
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 606 HKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLL 685
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 686 EEQLQHEISNKMEEFKILNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEkLKTVEELLETgLIQVATKEEEL 765
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV-LIGVEAAYEA-ALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 766 NAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSV---------EELLEAELLKVANKEKTVQDLKQ 836
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIgaavdlvasDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 837 EIKALKEEIGNVQLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQ 916
Cdd:COG1196 630 ARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEEREL 709
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 383418275 917 HNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLfKSQIEQLKQQ 983
Cdd:COG1196 710 AEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL-ERELERLERE 775
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
398-951 |
4.87e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 4.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 398 YQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKK 477
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELE-LELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 478 NAEQAvtqlKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE 557
Cdd:COG1196 313 ELEER----LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 558 QKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEEL 637
Cdd:COG1196 389 LEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 638 KDIQNmnfLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQheISNKMEEFKILNDQNKALKLEVQKL 717
Cdd:COG1196 469 LEEAA---LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG--LRGLAGAVAVLIGVEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 718 QTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVE 797
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 798 ELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSQVQELQNLLKGKEEQMN 877
Cdd:COG1196 624 GRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEE 703
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383418275 878 TMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEVSSASQFEELEI-VLKEKENELKRVEAMLKE 951
Cdd:COG1196 704 EEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPpDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
309-1023 |
3.22e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.63 E-value: 3.22e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 309 KEKSGVIQDALKKSSKGELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKER---SNVVIARMKDRIGTLEK 385
Cdd:TIGR02168 300 LEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELEE 379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 386 EHNVFQNKIHVSYQETQQMQMKFQqvreQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDYARLVNELTEK 465
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIE----RLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEEL 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 466 TGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskqq 545
Cdd:TIGR02168 453 QEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL----- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 546 leQRLMQLMESEQK-RVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQIKQTEDSL 623
Cdd:TIGR02168 523 --GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEGF 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 624 ANERDHLTSKEEELKDiqNMNFLL-----------KAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHE 692
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRK--ALSYLLggvlvvddldnALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRRE 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 693 ISNKMEEFKILNDQNKALKLEVQKLQTLVSEQpnKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTEN 772
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 773 SSLTKEVQDLKAKqndqvsfaslVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEK 852
Cdd:TIGR02168 757 TELEAEIEELEER----------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 853 AQQL----SITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLAntgkwlqdlqEENESLKAHVQEVAQHNLKEVSSASQF 928
Cdd:TIGR02168 827 ESLErriaATERRLEDLEEQIEELSEDIESLAAEIEELEELIE----------ELESELEALLNERASLEEALALLRSEL 896
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 929 EELEIVLKEKENELKRVEAMLKEResdlssKTKLLQDVQDENKLfKSQIEQLKQQNYQQASSfpPHEELLKVISEREKEI 1008
Cdd:TIGR02168 897 EELSEELRELESKRSELRRELEEL------REKLAQLELRLEGL-EVRIDNLQERLSEEYSL--TLEEAEALENKIEDDE 967
|
730
....*....|....*
gi 383418275 1009 SGLWNELDSLKDAVE 1023
Cdd:TIGR02168 968 EEARRRLKRLENKIK 982
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-160 |
6.50e-12 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 64.37 E-value: 6.50e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 29 MKETLYDEVLAKQKREQKLIPTKTDKKKAEKKKNKKK------EIQNGNLHESD----SESVPRDFKLSDALAVEDdqVV 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAA--LE 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383418275 99 PVPLNVVETSSSVRERKKKEKKQKPVLEEQVIKESDASKIPGKKVEPVPVTKQPTPPSEAAA 160
Cdd:pfam05104 79 PEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEAVQPKPALEKEEPPA 140
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
452-1147 |
1.39e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.32 E-value: 1.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 452 RQDYARLVNELTEKTGKLQQEEVQKknAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQS 531
Cdd:PTZ00121 1165 KAEEARKAEDAKKAEAARKAEEVRK--AEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEA 1242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 532 LHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESlqMQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEElhkviAE 611
Cdd:PTZ00121 1243 KKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEE-----AK 1315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 612 KDKQIKQTEDSLANERDHLTSKEEELKDIQNMNfLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQH 691
Cdd:PTZ00121 1316 KADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA-KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD 1394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 692 EISNKMEEFKILNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEK---DEKLKTVEElletgliqvATKEEELNAI 768
Cdd:PTZ00121 1395 EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAkkaDEAKKKAEE---------AKKAEEAKKK 1465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 769 RTEnsslTKEVQDLKAKQNDqvsfASLVEELKKVIHEkdGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEignv 848
Cdd:PTZ00121 1466 AEE----AKKADEAKKKAEE----AKKADEAKKKAEE--AKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAE---- 1531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 849 QLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKE----VSS 924
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEkkmkAEE 1611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 925 ASQFEELEIVLKE--KENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQAssfpphEELLKVIS 1002
Cdd:PTZ00121 1612 AKKAEEAKIKAEElkKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKA------EEAKKAEE 1685
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1003 EREKEISGLWNELDSlKDAVEHQRKKNNERQQQVEAVELEAKevlkklfpkvsvpsnlsysewlhgfEKKAKECMAGTSG 1082
Cdd:PTZ00121 1686 DEKKAAEALKKEAEE-AKKAEELKKKEAEEKKKAEELKKAEE-------------------------ENKIKAEEAKKEA 1739
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383418275 1083 SEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIK 1147
Cdd:PTZ00121 1740 EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIF 1804
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
757-1050 |
4.95e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 4.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 757 QVATKEEELNAIRTENSSLTKEVQDLKAKqndqvsfaslVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQ 836
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAE----------LEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 837 EIKALKEEIGNVQLEKAQqlsITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQ 916
Cdd:COG1196 310 RRRELEERLEELEEELAE---LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 917 HNLKEVSSASQFE-ELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQassfpphE 995
Cdd:COG1196 387 ELLEALRAAAELAaQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE-------E 459
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 383418275 996 ELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKL 1050
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
628-1237 |
2.56e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.00 E-value: 2.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 628 DHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKILND-Q 706
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEElK 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 707 NKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETgLIQVATKEEELNAIRTENSSLTKEVQDLKAKQ 786
Cdd:PRK03918 238 EEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKE-LKELKEKAEEYIKLSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 787 NDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQdLKQEIKALKEEIGNVQLEKAQqLSITSQVQELQ 866
Cdd:PRK03918 317 SRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHE-LYEEAKAKKEELERLKKRLTG-LTPEKLEKELE 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 867 NLLKGKEEQMNTMKAVLEEKeKDLANTGKWLQDLQEENESLKA------------HVQEVAQHNLKEVSS-ASQFEELEI 933
Cdd:PRK03918 395 ELEKAKEEIEEEISKITARI-GELKKEIKELKKAIEELKKAKGkcpvcgrelteeHRKELLEEYTAELKRiEKELKEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 934 VLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQqassfppHEELLKVISEREKEISGLWN 1013
Cdd:PRK03918 474 KERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEE-------YEKLKEKLIKLKGEIKSLKK 546
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1014 ELDSLKDAvehqRKKNNERQQQVEAVELEAKEVLKKLfpkvsvpsnlsysewlhgfekkakecmaGTSGSEEVKVLEHKL 1093
Cdd:PRK03918 547 ELEKLEEL----KKKLAELEKKLDELEEELAELLKEL----------------------------EELGFESVEELEERL 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1094 KEADEMHtllqlecEKYKSvLAETEGILQKLQRSVEQEENKwkvkVDESHKTIKQMQSSFTSSEQELERLRRE--NKDIE 1171
Cdd:PRK03918 595 KELEPFY-------NEYLE-LKDAEKELEREEKELKKLEEE----LDKAFEELAETEKRLEELRKELEELEKKysEEEYE 662
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 383418275 1172 NLRREREHLEMELEKAEMErstyVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQ 1237
Cdd:PRK03918 663 ELREEYLELSRELAGLRAE----LEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVE 724
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
667-1055 |
2.80e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.01 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 667 ELEKMQQSVYVKDDKIRLLEEQLQ--HEISNKMEEFKILNDqnkalKLEVQKLQTLVSEqpnkdvVEQMEKCIQEKDEKL 744
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLErlRREREKAERYQALLK-----EKREYEGYELLKE------KEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 745 KTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKakQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKV 824
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG--EEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 825 ANKEKTVQDLKQEIKALKEEIGNVQLEKAQqlsitsqvqeLQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEEN 904
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDK----------LTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKL 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 905 ESLKahvQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQN 984
Cdd:TIGR02169 395 EKLK---REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEL 471
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 383418275 985 YQQASSfppheellkvISEREKEISGLWNELdslkDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFPKVS 1055
Cdd:TIGR02169 472 YDLKEE----------YDRVEKELSKLQREL----AEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVA 528
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
463-1263 |
4.86e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 4.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 463 TEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLtdtlvs 542
Cdd:TIGR02169 205 REREKAERYQALLKEKREYEGYELLKEKEALERQKEA----IERQLASLEEELEKLTEEISELEKRLEEIEQLL------ 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 543 kQQLEQRLMQLMESEQKRVNKE--------ESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDK 614
Cdd:TIGR02169 275 -EELNKKIKDLGEEEQLRVKEKigeleaeiASLERSIAEKERELEDAEERLAKLEAEIDKLLAE---IEELEREIEEERK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 615 QIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEIS 694
Cdd:TIGR02169 351 RRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIA 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 695 NKMEEFKILNDQNKALKLEVQKLQTLVSEqpNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSS 774
Cdd:TIGR02169 431 GIEAKINELEEEKEDKALEIKKQEWKLEQ--LAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRG 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 775 lTKEVQDLKAKQNDQVsfASLVEELKKVIHEKDGKIKsVEELLEAELLKVANKEktvqDLKQEIKALKEEignvQLEKAQ 854
Cdd:TIGR02169 509 -GRAVEEVLKASIQGV--HGTVAQLGSVGERYATAIE-VAAGNRLNNVVVEDDA----VAKEAIELLKRR----KAGRAT 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 855 QLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKW-LQD--LQEENESLKAHVQEVAQHNL------------ 919
Cdd:TIGR02169 577 FLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYvFGDtlVVEDIEAARRLMGKYRMVTLegelfeksgamt 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 920 --------KEVSSASQFEELEIV---LKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQnyqqa 988
Cdd:TIGR02169 657 ggsraprgGILFSRSEPAELQRLrerLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE----- 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 989 ssfppHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLfpkvsvpsnlsysewlhg 1068
Cdd:TIGR02169 732 -----EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL------------------ 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1069 fekkakecmagtsGSEEVKVLEHKLKEADEMHTllqleceKYKSVLAETEGILQKLQRSVEQEENKWKVKVDEshktikq 1148
Cdd:TIGR02169 789 -------------SHSRIPEIQAELSKLEEEVS-------RIEARLREIEQKLNRLTLEKEYLEKEIQELQEQ------- 841
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1149 mqssftssEQELERLRRENKD-IENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLH 1227
Cdd:TIGR02169 842 --------RIDLKEQIKSIEKeIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIE 913
|
810 820 830
....*....|....*....|....*....|....*.
gi 383418275 1228 KAQQSLELIQSKIVKAAGDITVIENSDVSPETESSE 1263
Cdd:TIGR02169 914 KKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE 949
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
602-1272 |
6.80e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 6.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 602 AEELHKviAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNflLKAEVQKLQALANEQAAAAHELEKMQQSVYvKDDK 681
Cdd:PTZ00121 1142 AEEARK--AEDAKRVEIARKAEDARKAEEARKAEDAKKAEAAR--KAEEVRKAEELRKAEDARKAEAARKAEEER-KAEE 1216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 682 IRLLEEQLQHEISNKMEEFKilNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETgliqvatk 761
Cdd:PTZ00121 1217 ARKAEDAKKAEAVKKAEEAK--KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKA-------- 1286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 762 EEELNAIRTENSSLTKEVQDLKAKQNDqvsfASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKAL 841
Cdd:PTZ00121 1287 EEKKKADEAKKAEEKKKADEAKKKAEE----AKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA 1362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 842 KEEIGNVQLE------KAQQLSITSQVQELQNLLKGKEEQ----MNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHV 911
Cdd:PTZ00121 1363 EEKAEAAEKKkeeakkKADAAKKKAEEKKKADEAKKKAEEdkkkADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 912 QEVAQHNLKEVSSASQFEELeivlKEKENELKRVEAMLKERESDLSS---KTKLLQDVQDENKLFKSQIEQLKQQNYQQA 988
Cdd:PTZ00121 1443 AKKADEAKKKAEEAKKAEEA----KKKAEEAKKADEAKKKAEEAKKAdeaKKKAEEAKKKADEAKKAAEAKKKADEAKKA 1518
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 989 SSFPPHEELLKVISER---------EKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFPKVSVPSN 1059
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKkadeakkaeEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1060 LSYSEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVL-AETEGILQKLQRSVEQEENKWKVK 1138
Cdd:PTZ00121 1599 KLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKkAEEENKIKAAEEAKKAEEDKKKAE 1678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1139 vdeshkTIKQMQSSFTSSEQELERLRRENKDIENLRREREHLEM---ELEKAEMERSTYVTEVRELKAQLNETLTKLRTE 1215
Cdd:PTZ00121 1679 ------EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKkaeELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD 1752
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 383418275 1216 QNERQKVAGDLHKAQQSLELIQSKIVKAAGDITVIENSDVSPETESSEKETMSVSLN 1272
Cdd:PTZ00121 1753 EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFAN 1809
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
309-1050 |
1.29e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 1.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 309 KEKSGVIQDALKKSSKGELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLT---QEMMSEKERSNVVIARMKDRIGTL-E 384
Cdd:TIGR02169 207 REKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTeeiSELEKRLEEIEQLLEELNKKIKDLgE 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 385 KEHNVFQNKI---HVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDYARLVNE 461
Cdd:TIGR02169 287 EEQLRVKEKIgelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEER-KRRDKLTEEYAELKEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 462 LTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRK---RTAEHEAAQQDLQSKFVAKENEVQSLHSKLTD 538
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRlqeELQRLSEELADLNAAIAGIEAKINELEEEKED 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 539 TLVSKQQLEQRLMQL---MESEQKRVNKEESLQMQVQDILEQNE----ALKAQIQQFHSQIAAQTSASVLAEE----LHK 607
Cdd:TIGR02169 446 KALEIKKQEWKLEQLaadLSKYEQELYDLKEEYDRVEKELSKLQrelaEAEAQARASEERVRGGRAVEEVLKAsiqgVHG 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 608 VIAE----KDKQIKQTEDSLANERDHLTSKEEE--------LKD--IQNMNFLLKAEVQKLQAlaneqaaaahELEKMQQ 673
Cdd:TIGR02169 526 TVAQlgsvGERYATAIEVAAGNRLNNVVVEDDAvakeaielLKRrkAGRATFLPLNKMRDERR----------DLSILSE 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 674 SVYVkDDKIRLLEEQLQHE-----------ISNKMEEFKILNDQNKALKLEVQKLQT-------LVSEQPNKDVVEQMEK 735
Cdd:TIGR02169 596 DGVI-GFAVDLVEFDPKYEpafkyvfgdtlVVEDIEAARRLMGKYRMVTLEGELFEKsgamtggSRAPRGGILFSRSEPA 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 736 CIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQN----DQVSFASLVEELKKVIHEKDGKIK 811
Cdd:TIGR02169 675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEqleqEEEKLKERLEELEEDLSSLEQEIE 754
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 812 SVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKaqqlsITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLA 891
Cdd:TIGR02169 755 NVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPE-----IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 892 NTGKWLQDLQEENESLKAHVQEVAQhnlKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENK 971
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEK---EIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIE 906
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 972 LFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDaVEHQRKKNNERQQQVEAVELEA----KEVL 1047
Cdd:TIGR02169 907 ELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLED-VQAELQRVEEEIRALEPVNMLAiqeyEEVL 985
|
...
gi 383418275 1048 KKL 1050
Cdd:TIGR02169 986 KRL 988
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
416-981 |
1.59e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 416 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdyaRLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQE 492
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 493 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQ 570
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKViaeKDKQIKQTEDSLANERDHLTSKEEEL-KDIQNmnflLKA 649
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERL---KKRLTGLTPEKLEKELEELEKAKEEIeEEISK----ITA 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 650 EVQKLQALANEQAAAAHELEKMQQSVYV------KDDKIRLLEEQLQhEISNKMEEFKILNDQNKALKLEVQKLQTLVSE 723
Cdd:PRK03918 413 RIGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKK 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 724 QPNKDVVEQMEKCIQEKDEKLKTVE-ELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAkqndqvsFASLVEELKKV 802
Cdd:PRK03918 492 ESELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE-------LKKKLAELEKK 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 803 IHEKDGKIKSVEELLEAELLKvankekTVQDLKQEIKALkEEIGNVQLEkaqQLSITSQVQELQNLLKGKEEQmntmkav 882
Cdd:PRK03918 565 LDELEEELAELLKELEELGFE------SVEELEERLKEL-EPFYNEYLE---LKDAEKELEREEKELKKLEEE------- 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 883 LEEKEKDLANTGKWLQDLQEENESLKAHVQEvaqhnlkevssaSQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKL 962
Cdd:PRK03918 628 LDKAFEELAETEKRLEELRKELEELEKKYSE------------EEYEELREEYLELSRELAGLRAELEELEKRREEIKKT 695
|
570
....*....|....*....
gi 383418275 963 LQDVQDENKLFKSQIEQLK 981
Cdd:PRK03918 696 LEKLKEELEEREKAKKELE 714
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
324-988 |
2.85e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.54 E-value: 2.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 324 KGELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERSNVVIARMKDRIGTLEK---EHNVFQNKIHVSYQE 400
Cdd:TIGR02169 335 LAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKlkrEINELKRELDRLQEE 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 401 TQQMQMKFQQVREQM---EAEIAHLKQENGILRDAVSNTTNQLES------KQSAELNKLRQDYARLVNELTEKTGKLQQ 471
Cdd:TIGR02169 415 LQRLSEELADLNAAIagiEAKINELEEEKEDKALEIKKQEWKLEQlaadlsKYEQELYDLKEEYDRVEKELSKLQRELAE 494
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 472 EEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRK--------RTAEHEAAQQDLQSKFVAKE----------------- 526
Cdd:TIGR02169 495 AEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQlgsvgeryATAIEVAAGNRLNNVVVEDDavakeaiellkrrkagr 574
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 527 ------NEVQSLHSKLTdtLVSKQQLEQRLMQLMESEQKRvnkEESLQMQVQD--ILEQNEALKAQIQQFH--------- 589
Cdd:TIGR02169 575 atflplNKMRDERRDLS--ILSEDGVIGFAVDLVEFDPKY---EPAFKYVFGDtlVVEDIEAARRLMGKYRmvtlegelf 649
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 590 SQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELE 669
Cdd:TIGR02169 650 EKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLE 729
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 670 KMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKLEVQKLQTLVSEQPNKDVVEQmekcIQEKDEKLKTVEE 749
Cdd:TIGR02169 730 QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR----IPEIQAELSKLEE 805
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 750 LLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDqvsFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEK 829
Cdd:TIGR02169 806 EVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRID---LKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLES 882
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 830 TVQDLKQEIKALKEEIGNVQlekaqqlsitSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKa 909
Cdd:TIGR02169 883 RLGDLKKERDELEAQLRELE----------RKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL- 951
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383418275 910 hVQEVAQHNLKEVSSAsqFEELEIVLKEKENELKRVEAmlkeRESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQA 988
Cdd:TIGR02169 952 -SLEDVQAELQRVEEE--IRALEPVNMLAIQEYEEVLK----RLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEA 1023
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
376-983 |
4.35e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.82 E-value: 4.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 376 MKDRIGTLEKEHnvfQNKIHVSYQetqQMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKlRQDY 455
Cdd:pfam15921 243 VEDQLEALKSES---QNKIELLLQ---QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQ-NSMY 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 456 ARLVNELtektgklqqeevqkknaEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSK 535
Cdd:pfam15921 316 MRQLSDL-----------------ESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQ 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 536 LTDTLVSKQQLEQRLMQLMESEQKRVNKE--------------ESLQMQVQDILEQNEALKAQIQ-QFHSQIAAQTSASV 600
Cdd:pfam15921 379 LQKLLADLHKREKELSLEKEQNKRLWDRDtgnsitidhlrrelDDRNMEVQRLEALLKAMKSECQgQMERQMAAIQGKNE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 601 LAEELHKVIAekdkQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEvqkLQALANEQAAAAHELEKMQQSVYVKdd 680
Cdd:pfam15921 459 SLEKVSSLTA----QLESTKEMLRKVVEELTAKKMTLESSERTVSDLTAS---LQEKERAIEATNAEITKLRSRVDLK-- 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 681 kirllEEQLQHeISNKMEEFKILNDQNKALKLEvqklqtlvseqpnkdvveqmekcIQEKDEKLKTVEELLETGLIQVAT 760
Cdd:pfam15921 530 -----LQELQH-LKNEGDHLRNVQTECEALKLQ-----------------------MAEKDKVIEILRQQIENMTQLVGQ 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 761 KEEELNAIRTENSSLTKEVQDLKAKQNDqvsFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKA 840
Cdd:pfam15921 581 HGRTAGAMQVEKAQLEKEINDRRLELQE---FKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQ 657
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 841 LKEEIGNVQLEKAqqlSITSQVQELQNLLKGKEEQM----NTMKAVLEEKEKDLANTGKWLQDLqeenESLKAHVQEVAQ 916
Cdd:pfam15921 658 LLNEVKTSRNELN---SLSEDYEVLKRNFRNKSEEMetttNKLKMQLKSAQSELEQTRNTLKSM----EGSDGHAMKVAM 730
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 383418275 917 HNLKEVSSA-SQFEELEI---VLKEKENELKRVEAMLKERESDLSSKtklLQDVQDENKLFKSQIEQLKQQ 983
Cdd:pfam15921 731 GMQKQITAKrGQIDALQSkiqFLEEAMTNANKEKHFLKEEKNKLSQE---LSTVATEKNKMAGELEVLRSQ 798
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
326-584 |
7.24e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 7.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 326 ELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERsnvvIARMKDRIGTLEKEHNVFQNKIHVSYQETQQMQ 405
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER----RRELEERLEELEEELAELEEELEELEEELEELE 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 406 MKFQQVREQMEAEIAHLKQENGILRDAVsnttnQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQ 485
Cdd:COG1196 344 EELEEAEEELEEAEAELAEAEEALLEAE-----AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 486 LKVQLQEAERRWEEVqsyiRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEE 565
Cdd:COG1196 419 LEEELEELEEALAEL----EEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL 494
|
250
....*....|....*....
gi 383418275 566 SLQMQVQDILEQNEALKAQ 584
Cdd:COG1196 495 LLLEAEADYEGFLEGVKAA 513
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
376-806 |
8.09e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.95 E-value: 8.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 376 MKDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEAEIAHLKQENGILRDaVSNTTNQLESKQSAELNKLRQDY 455
Cdd:TIGR04523 230 LKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE-LEKQLNQLKSEISDLNNQKEQDW 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 456 ARLVN-ELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKfvakENEVQSLHS 534
Cdd:TIGR04523 309 NKELKsELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKL----KKENQSYKQ 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 535 KLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIA----AQTSASVLAEELHKVIA 610
Cdd:TIGR04523 385 EIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKdltnQDSVKELIIKNLDNTRE 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 611 EKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANeqaaaahELEKMQQSVYVKDDKIRLLEEQLQ 690
Cdd:TIGR04523 465 SLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVK-------DLTKKISSLKEKIEKLESEKKEKE 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 691 HEISNKMEEFKILNDQNKALKLEV------QKLQTLVSEQPN-KDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEE 763
Cdd:TIGR04523 538 SKISDLEDELNKDDFELKKENLEKeideknKEIEELKQTQKSlKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEK 617
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 383418275 764 ELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEK 806
Cdd:TIGR04523 618 ELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNK 660
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
609-1049 |
1.13e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 1.13e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 609 IAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKmqqsvyvKDDKIRLLEEQ 688
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQK-------NIDKIKNKLLK 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 689 LQHEISN---KMEEFKILNDQNKALKLEVQKLQTLVSEqpNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEEL 765
Cdd:TIGR04523 199 LELLLSNlkkKIQKNKSLESQISELKKQNNQLKDNIEK--KQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKEL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 766 NAIRTENSSLTKEVQDLKAKQND--QVSFASLVEELKKVIHEKDGKIKSVEElleaellKVANKEKTVQDLKQEIKALKE 843
Cdd:TIGR04523 277 EQNNKKIKELEKQLNQLKSEISDlnNQKEQDWNKELKSELKNQEKKLEEIQN-------QISQNNKIISQLNEQISQLKK 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 844 EIGNVQLEKAQ-QLSITSQVQELQNLLKGKEE----------QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQ 912
Cdd:TIGR04523 350 ELTNSESENSEkQRELEEKQNEIEKLKKENQSykqeiknlesQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIE 429
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 913 EVAQHNLKEVSSAS-----------QFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLK 981
Cdd:TIGR04523 430 RLKETIIKNNSEIKdltnqdsvkelIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELE 509
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 982 QQ----NYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAV--EHQRKKNNERQQQVEAVELEAKEVLKK 1049
Cdd:TIGR04523 510 EKvkdlTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELkkENLEKEIDEKNKEIEELKQTQKSLKKK 583
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
435-1050 |
1.44e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 1.44e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 435 NTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQE--AERRWEEVQ-SYIRKRTAEH 511
Cdd:TIGR04523 85 KDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKflTEIKKKEKElEKLNNKYNDL 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 512 EAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmeseQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQ 591
Cdd:TIGR04523 165 KKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNL----KKKIQKNKSLESQISELKKQNNQLKDNIEKKQQE 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 592 IaaqtsasvlaEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQAlaneqaaaahelekm 671
Cdd:TIGR04523 241 I----------NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKS--------------- 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 672 qqsvyvkddKIRLLEEQLQHEISNKMEEFkILNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEEll 751
Cdd:TIGR04523 296 ---------EISDLNNQKEQDWNKELKSE-LKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR-- 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 752 etgliQVATKEEELNAIRTENSSLTKEVQDLKAKQNDqvsFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTV 831
Cdd:TIGR04523 364 -----ELEEKQNEIEKLKKENQSYKQEIKNLESQIND---LESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETI 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 832 QDLKQEIKALKEEIGNVQLEKAQQLSITSQvqeLQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHV 911
Cdd:TIGR04523 436 IKNNSEIKDLTNQDSVKELIIKNLDNTRES---LETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 912 QEVAQhnlKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLssKTKLLQDVQDENklfKSQIEQLKQQNYQQASSf 991
Cdd:TIGR04523 513 KDLTK---KISSLKEKIEKLESEKKEKESKISDLEDELNKDDFEL--KKENLEKEIDEK---NKEIEELKQTQKSLKKK- 583
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 383418275 992 ppHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKL 1050
Cdd:TIGR04523 584 --QEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKK 640
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1085-1295 |
7.32e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.79 E-value: 7.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1085 EVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLR 1164
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1165 RENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAA 1244
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 383418275 1245 GDITVIENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEH 1295
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
829-1049 |
1.04e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 1.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 829 KTVQDLKQEIKALKEEIGNVQLEKAQQlsiTSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLK 908
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAAL---KKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 909 AHVQEVaQHNLKEVSSA----SQFEELEIVLKEKENE--------LKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQ 976
Cdd:COG4942 97 AELEAQ-KEELAELLRAlyrlGRQPPLALLLSPEDFLdavrrlqyLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 383418275 977 IEQLKQQNYQQassfppHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKK 1049
Cdd:COG4942 176 LEALLAELEEE------RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
326-841 |
1.10e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.40 E-value: 1.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 326 ELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERSNVVIARM---KDRIGTLEKEHNVFQNKIhvsyQETQ 402
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEyelLAELARLEQDIARLEERR----RELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 403 QMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQA 482
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE-AELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 483 VTQLKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVN 562
Cdd:COG1196 395 AAELAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 563 KEESLQMQVQDILEQNEALKAQIQQFHSQIA--AQTSASVLAEELHKVIAEKDKQIKQ-TEDSLANERDHLTSKEEELKD 639
Cdd:COG1196 471 EAALLEAALAELLEELAEAAARLLLLLEAEAdyEGFLEGVKAALLLAGLRGLAGAVAVlIGVEAAYEAALEAALAAALQN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 640 IQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKIlndqnKALKLEVQKLQT 719
Cdd:COG1196 551 IVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA-----RYYVLGDTLLGR 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 720 LVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEEL 799
Cdd:COG1196 626 TLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE 705
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 800 KKVIHEKDGKIKSVEELLEAELLKVANK--------------------------------EKTVQDLKQEIKAL 841
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEreelleelleeeelleeealeelpeppdleelERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
920-1246 |
1.69e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.63 E-value: 1.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 920 KEVSSASQFEELEIVLKEKENEL-----KRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQnyqqassfppH 994
Cdd:COG1196 207 RQAEKAERYRELKEELKELEAELlllklRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE----------L 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 995 EELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLfpkvsvpsnlsysewlHGFEKKAK 1074
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL----------------EELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1075 ECmagtsgSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKwkvkVDESHKTIKQMQSSFT 1154
Cdd:COG1196 341 EL------EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA----AAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1155 SSEQELERLRRE----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQ 1230
Cdd:COG1196 411 ALLERLERLEEEleelEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
330
....*....|....*.
gi 383418275 1231 QSLELIQSKIVKAAGD 1246
Cdd:COG1196 491 ARLLLLLEAEADYEGF 506
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
448-1275 |
2.75e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.04 E-value: 2.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 448 LNKLRQDYARLVNELTEKTGKLQQ-EEVQKKNAEQAVTQLKVQLQEAERRwEEVQSYIRKRTAEheaAQQDLQSKFVAKE 526
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRRLNESNElHEKQKFYLRQSVIDLQTKLQEMQME-RDAMADIRRRESQ---SQEDLRNQLQNTV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 527 NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEqkrvnkeESLQMQVQDILEQNEALKAQIQQFHSQIAAQTSASvLAEELH 606
Cdd:pfam15921 152 HELEAAKCLKEDMLEDSNTQIEQLRKMMLSH-------EGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRS-LGSAIS 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 607 KVIAEKDKQIKQTEDSLANERDHLTSKEEELKDiqNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLE 686
Cdd:pfam15921 224 KILRELDTEISYLKGRIFPVEDQLEALKSESQN--KIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 687 EQLQHEISNkmeefkilndQNKALKLEVQKLQTLVSEQPNkdvveqmekciqEKDEKLKTVEELLETGLIQVATKEEELN 766
Cdd:pfam15921 302 EIIQEQARN----------QNSMYMRQLSDLESTVSQLRS------------ELREAKRMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 767 AIRTENSSLTKEVQDLkakqNDQVsfaslvEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEig 846
Cdd:pfam15921 360 EARTERDQFSQESGNL----DDQL------QKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNME-- 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 847 nvqlekaqqlsitsqVQELQNLLKGKEE----QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEV 922
Cdd:pfam15921 428 ---------------VQRLEALLKAMKSecqgQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLE 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 923 SSASQFEELEIVLKEKENELK-----------RVEAMLKERESdLSSKTKLLQDVQDENKLFKSQ-------IEQLKQQN 984
Cdd:pfam15921 493 SSERTVSDLTASLQEKERAIEatnaeitklrsRVDLKLQELQH-LKNEGDHLRNVQTECEALKLQmaekdkvIEILRQQI 571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 985 YQQASSFPPHEELLKVI----SEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLkklfpkvsvpsnl 1060
Cdd:pfam15921 572 ENMTQLVGQHGRTAGAMqvekAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLV------------- 638
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1061 sysewlhgfekkakecmagTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE---NKWKV 1137
Cdd:pfam15921 639 -------------------NAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMEtttNKLKM 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1138 KVDESHKTIKQMQSSFTSSE----QELERLRRENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLR 1213
Cdd:pfam15921 700 QLKSAQSELEQTRNTLKSMEgsdgHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELS 779
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 1214 TEQNERQKVAGDLHKAQQSLELIQSKI--VKAAGDITVIENSDVSPETESSEKETMSVSLNQTV 1275
Cdd:pfam15921 780 TVATEKNKMAGELEVLRSQERRLKEKVanMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTL 843
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
824-1204 |
2.77e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 824 VANKEKTVQDLKQEIKALKEEIGNVQL---EKAQQLSITS----QVQELQNLLKGKEEQMNTMKAV-LEEKEKDLANTGK 895
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLiidEKRQQLERLRrereKAERYQALLKEKREYEGYELLKeKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 896 WLQDLQEENESLKAHVQEVAQhnlkevssasQFEELEIVLKEKENELKRV----EAMLKERESDLSSKTKLLQDVQDENK 971
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEK----------RLEEIEQLLEELNKKIKDLgeeeQLRVKEKIGELEAEIASLERSIAEKE 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 972 lfksqiEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLf 1051
Cdd:TIGR02169 315 ------RELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDEL- 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1052 pkvsvpsnLSYSEWLHGFEKKakecmagtsgseevkvLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQE 1131
Cdd:TIGR02169 388 --------KDYREKLEKLKRE----------------INELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEK 443
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 383418275 1132 ENKWKvKVDESHKTIKQMQSSFTSSEQELERLRRENKDIEnlrREREHLEMELEKAEMERSTYVTEVRELKAQ 1204
Cdd:TIGR02169 444 EDKAL-EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE---KELSKLQRELAEAEAQARASEERVRGGRAV 512
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
741-1253 |
3.14e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.60 E-value: 3.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 741 DEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAkqndqvsFASLVEELKKVIHEKDGKIKSVEELLEAE 820
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE-------LKEEIEELEKELESLEGSKRKLEEKIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 821 LLKVANKEKTVQDLKQEIKALKEeignvqlekaqqlsitsqvqelqnlLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDL 900
Cdd:PRK03918 265 EERIEELKKEIEELEEKVKELKE-------------------------LKEKAEEYIKLSEFYEEYLDELREIEKRLSRL 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 901 QEENESLKAHVQEVAQhnlkevssasqfeeleivLKEKENELKRVEAMLKERESDLSSKTKLLQDVqdenKLFKSQIEQL 980
Cdd:PRK03918 320 EEEINGIEERIKELEE------------------KEERLEELKKKLKELEKRLEELEERHELYEEA----KAKKEELERL 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 981 KQQnyqqaSSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAveleakevLKKLFPKVSVPSNL 1060
Cdd:PRK03918 378 KKR-----LTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEE--------LKKAKGKCPVCGRE 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1061 SYsewlhgfEKKAKECMAgtSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQ-----RSVEQEENKW 1135
Cdd:PRK03918 445 LT-------EEHRKELLE--EYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKElaeqlKELEEKLKKY 515
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1136 KV-KVDESHKTIKQMQSSFTSSEQELERLRRENKDIENLRREREHLEMELEKAEMERSTYVTEVRELK----AQLNETLT 1210
Cdd:PRK03918 516 NLeELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGfesvEELEERLK 595
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 383418275 1211 KLRT---EQNERQKVAGDLHKAQQSLELIQSKIVKAAGDITVIENS 1253
Cdd:PRK03918 596 ELEPfynEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKR 641
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
442-1037 |
5.88e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.88 E-value: 5.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 442 SKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQkknAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSK 521
Cdd:pfam05483 172 KKYEYEREETRQVYMDLNNNIEKMILAFEELRVQ---AENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 522 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDIleqnealKAQIQQ-FHSQIAAQTSASV 600
Cdd:pfam05483 249 ITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDI-------KMSLQRsMSTQKALEEDLQI 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 601 LAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNmnfLLKAEVQKLQALANEQAAAAHELEKmQQSVYVKDD 680
Cdd:pfam05483 322 ATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEE---LLRTEQQRLEKNEDQLKIITMELQK-KSSELEEMT 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 681 KIRLLEEQLQHEISNKMEEFKILNDQNKALKLEVQKLQTlvSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVAT 760
Cdd:pfam05483 398 KFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKG--KEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVED 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 761 KEEELNAIRTENSSLTKEVQDLKAKQNDQVSFAS-LVEELKKviHEKDgkIKSVEELLEAELLKVANKEKTVQDLKQEIK 839
Cdd:pfam05483 476 LKTELEKEKLKNIELTAHCDKLLLENKELTQEASdMTLELKK--HQED--IINCKKQEERMLKQIENLEEKEMNLRDELE 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 840 ALKEEIGNVQLEKAQQLSITSQ-VQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKA--------- 909
Cdd:pfam05483 552 SVREEFIQKGDEVKCKLDKSEEnARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKkgsaenkql 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 910 HVQEVAQHNLK-EVSSASQFEELEIVLKEKENELKRV-----------------EAMLKERESDLSSKTKLLQDVQDENK 971
Cdd:pfam05483 632 NAYEIKVNKLElELASAKQKFEEIIDNYQKEIEDKKIseeklleevekakaiadEAVKLQKEIDKRCQHKIAEMVALMEK 711
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 383418275 972 LFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVE 1037
Cdd:pfam05483 712 HKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
823-1251 |
6.04e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.83 E-value: 6.04e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 823 KVANKEKTVQDLKQEIKALKEEIGnvqlekaqqlSITSQVQELQNLLKGKEEQmntmkavLEEKEKDLANTGKWLQDLQE 902
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLE----------KFIKRTENIEELIKEKEKE-------LEEVLREINEISSELPELRE 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 903 ENESLKAHVQEVAQHnlkevssASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEqlKQ 982
Cdd:PRK03918 222 ELEKLEKEVKELEEL-------KEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKE--KA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 983 QNYQQASSFppHEELLKVISEREKEISGLWNELDSlkdaVEHQRKKNNERQQQVEAVELEAKEVLKKLfpKVSVPSNLSY 1062
Cdd:PRK03918 293 EEYIKLSEF--YEEYLDELREIEKRLSRLEEEING----IEERIKELEEKEERLEELKKKLKELEKRL--EELEERHELY 364
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1063 SEWLHgfEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQ-EENKWKVKV-- 1139
Cdd:PRK03918 365 EEAKA--KKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElKKAKGKCPVcg 442
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1140 ---DESHKtiKQMQSSFTSseqELERLRRENKDIENLRREREHLEMELEKaEMERSTYVTEVRELKAQLNETLTKLRTEQ 1216
Cdd:PRK03918 443 relTEEHR--KELLEEYTA---ELKRIEKELKEIEEKERKLRKELRELEK-VLKKESELIKLKELAEQLKELEEKLKKYN 516
|
410 420 430
....*....|....*....|....*....|....*
gi 383418275 1217 NErqkvagDLHKAQQSLELIQSKIVKAAGDITVIE 1251
Cdd:PRK03918 517 LE------ELEKKAEEYEKLKEKLIKLKGEIKSLK 545
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
349-781 |
6.62e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 50.82 E-value: 6.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 349 AATKDRCKQLTQEMmsEKERSNVVIARmKDRIGTLEKEHNVFQNKihvsyQETQQMQMKFQQVREQMEAEIAHLKQENGI 428
Cdd:PRK10929 19 AATAPDEKQITQEL--EQAKAAKTPAQ-AEIVEALQSALNWLEER-----KGSLERAKQYQQVIDNFPKLSAELRQQLNN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 429 LRDAVSNttnqLESKQSAelNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRT 508
Cdd:PRK10929 91 ERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 509 AEHEAAQqdlQSKFVAKENEVQSLHSKLtdtlvskQQLEqrLMQLMESeqkrvNKEESLQMQVQDILEQNEALKAQIQQF 588
Cdd:PRK10929 165 TPNTPLA---QAQLTALQAESAALKALV-------DELE--LAQLSAN-----NRQELARLRSELAKKRSQQLDAYLQAL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 589 HSQIAAQ---------TSASVLAE---ELHKVIAEKDKQIKQTEDSL---ANERDHLTSKE-----EELKDIQNMNFL-- 646
Cdd:PRK10929 228 RNQLNSQrqreaeralESTELLAEqsgDLPKSIVAQFKINRELSQALnqqAQRMDLIASQQrqaasQTLQVRQALNTLre 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 647 --------------LKAEVQKLQalaneqaaaahELEKMQQsvyVKDDKIRLLEEQLQHEisnkmeefKILNDQNKALKL 712
Cdd:PRK10929 308 qsqwlgvsnalgeaLRAQVARLP-----------EMPKPQQ---LDTEMAQLRVQRLRYE--------DLLNKQPQLRQI 365
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383418275 713 EVQKLQTLVSEQpnkdvveqmeKCIQekDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLT---KEVQD 781
Cdd:PRK10929 366 RQADGQPLTAEQ----------NRIL--DAQLRTQRELLNSLLSGGDTLILELTKLKVANSQLEdalKEVNE 425
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
296-635 |
7.38e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.61 E-value: 7.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 296 FSEDEALCVVDLLKEKSGVIQDALKKSSKgELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERSNVVIAR 375
Cdd:pfam12128 597 ASEEELRERLDKAEEALQSAREKQAAAEE-QLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAE 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 376 MKD----RIGTLEKEHNVFQNKIHVSYQETQ--------QMQMKFQQVREQMEAEIAHLKQENGILRDAVSNTTNQLESK 443
Cdd:pfam12128 676 RKDsaneRLNSLEAQLKQLDKKHQAWLEEQKeqkreartEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETW 755
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 444 QSAELNKLRQD---YARLVNELTEKTGKLQQEEVQkknaEQAVTQLKVQLQEaerRWEEVQSYIRKRTAEHEAAQQDLQS 520
Cdd:pfam12128 756 YKRDLASLGVDpdvIAKLKREIRTLERKIERIAVR----RQEVLRYFDWYQE---TWLQRRPRLATQLSNIERAISELQQ 828
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 521 KFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQL---MESEQKRVNK------EESLQM-------QVQDILEQNEALKAQ 584
Cdd:pfam12128 829 QLARLIADTKLRRAKLEMERKASEKQQVRLSENlrgLRCEMSKLATlkedanSEQAQGsigerlaQLEDLKLKRDYLSES 908
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 383418275 585 IQQFHSQ---IAAQTSASVLAEELHKvIAEKDKQIKQTEDSLANERDHLTSKEE 635
Cdd:pfam12128 909 VKKYVEHfknVIADHSGSGLAETWES-LREEDHYQNDKGIRLLDYRKLVPYLEQ 961
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
757-1300 |
7.87e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 7.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 757 QVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVS----FASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQ 832
Cdd:TIGR04523 111 EIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTeikkKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNID 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 833 DLKQEIKALKEEIGNVQLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQ 912
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 913 EvaqhnlkevsSASQFEELEIVLKEKENELKRVEAMLKERESdlssktkllQDVQDENKLFKSQIEQLKQQNyqqassfp 992
Cdd:TIGR04523 271 E----------KQKELEQNNKKIKELEKQLNQLKSEISDLNN---------QKEQDWNKELKSELKNQEKKL-------- 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 993 phEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKlfpkvsvpsNLSYSEWLHGFEKK 1072
Cdd:TIGR04523 324 --EEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKE---------NQSYKQEIKNLESQ 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1073 AKECMAGTSGSEEV-KVLEHKLKEADEMHTLLQLECEKYKS---VLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQ 1148
Cdd:TIGR04523 393 INDLESKIQNQEKLnQQKDEQIKKLQQEKELLEKEIERLKEtiiKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKV 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1149 MQSSFTSSEQELERLRRE----NKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAG 1224
Cdd:TIGR04523 473 LSRSINKIKQNLEQKQKElkskEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF 552
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 383418275 1225 DLHKAQQSLEL--IQSKIVKAAGDITVIENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEHYQVLE 1300
Cdd:TIGR04523 553 ELKKENLEKEIdeKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLS 630
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
430-969 |
8.40e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 8.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 430 RDAVSNTTNQLESKQSAE----LNKLRQdyarlvnELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQsyir 505
Cdd:PRK02224 186 RGSLDQLKAQIEEKEEKDlherLNGLES-------ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE---- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 506 krtaEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEAL---- 581
Cdd:PRK02224 255 ----TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELrdrl 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 582 ---KAQIQQFHSQI-AAQTSASVL---AEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDiqNMNFLLKAEVQkL 654
Cdd:PRK02224 331 eecRVAAQAHNEEAeSLREDADDLeerAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE--LRERFGDAPVD-L 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 655 QALANEQAAAAHELEKMQQSVYVKDDKIRLLE------EQLQHE------------------ISNKMEEFKILNDQNKAL 710
Cdd:PRK02224 408 GNAEDFLEELREERDELREREAELEATLRTARerveeaEALLEAgkcpecgqpvegsphvetIEEDRERVEELEAELEDL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 711 KLEVQKLQTLVSEQpnKDVVEQmEKCIQEKDEKLKTVEELLEtgliqvaTKEEELNAIRTENSSLTKEVQDLKAKQNDQV 790
Cdd:PRK02224 488 EEEVEEVEERLERA--EDLVEA-EDRIERLEERREDLEELIA-------ERRETIEEKRERAEELRERAAELEAEAEEKR 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 791 SFASLVEELKKVIHEKDGKIKSVEELLEAELLKVAnkekTVQDLKQEIKALKEEIGNVQlEKAQQLsitsqvQELQNLLK 870
Cdd:PRK02224 558 EAAAEAEEEAEEAREEVAELNSKLAELKERIESLE----RIRTLLAAIADAEDEIERLR-EKREAL------AELNDERR 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 871 GKEEQMNTMKAVLEEKEKDLAntgkwLQDLQEENESLKAHVQEVAQhNLKEVssASQFEELEIVLKEKENELKRVEAmLK 950
Cdd:PRK02224 627 ERLAEKRERKRELEAEFDEAR-----IEEAREDKERAEEYLEQVEE-KLDEL--REERDDLQAEIGAVENELEELEE-LR 697
|
570
....*....|....*....
gi 383418275 951 ERESDLSSKTKLLQDVQDE 969
Cdd:PRK02224 698 ERREALENRVEALEALYDE 716
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
826-1050 |
1.32e-05 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 49.54 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 826 NKEKTVQDLKQ----EIKALKEEIGNVQLEKAQQLSIT-----SQVQELQNLLKGKEEQMNTMK-----AVLEEKEKDLA 891
Cdd:PRK05771 17 YKDEVLEALHElgvvHIEDLKEELSNERLRKLRSLLTKlsealDKLRSYLPKLNPLREEKKKVSvksleELIKDVEEELE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 892 NTGKWLQDLQEENESLKAHVQEVaQHNLKEVSSASQFEELEIVLKEKEN---ELKRVEAMLKERESDLSSKTKLLQDVQD 968
Cdd:PRK05771 97 KIEKEIKELEEEISELENEIKEL-EQEIERLEPWGNFDLDLSLLLGFKYvsvFVGTVPEDKLEELKLESDVENVEYISTD 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 969 ENKLF----------KSQIEQLKQQNYQQASsFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEA 1038
Cdd:PRK05771 176 KGYVYvvvvvlkelsDEVEEELKKLGFERLE-LEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYE 254
|
250
....*....|....*
gi 383418275 1039 V---ELEAKEVLKKL 1050
Cdd:PRK05771 255 YleiELERAEALSKF 269
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
442-643 |
1.37e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 442 SKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL--Q 519
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELeaQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 520 SKFVAKENEVQSLHSKLTDTLV-----SKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIAA 594
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 383418275 595 QTSAsvlAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNM 643
Cdd:COG4942 183 LEEE---RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
757-983 |
1.43e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 757 QVATKEEELNAIRTENSSLTKEVQDLKAKQndqvsfASLVEELKKVihekDGKIKSVEELLEAELLKVANKEKTVQDLKQ 836
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEE------KALLKQLAAL----ERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 837 EIKALKEEIGNVQLEKAQQLSI---TSQVQELQNLLKGKEeqmntmkavLEEKEKDLANTGKWLQDLQEENESLKAHVQE 913
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRAlyrLGRQPPLALLLSPED---------FLDAVRRLQYLKYLAPARREQAEELRADLAE 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 914 VAQhnlKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQ 983
Cdd:COG4942 162 LAA---LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
509-1181 |
1.54e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.58 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 509 AEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALkAQIQQF 588
Cdd:TIGR00618 194 GKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLR-ARIEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 589 HSQIAAQTSASVLAEELHKV--IAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAH 666
Cdd:TIGR00618 273 RAQEAVLEETQERINRARKAapLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHS 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 667 ELEKMQQSVYVKDDKIRLLEEQ--LQHEISNKMEEFKILNDQNKALKlevQKLQTLVSEQPNKDVVEQMEKCIQEKDEKL 744
Cdd:TIGR00618 353 QEIHIRDAHEVATSIREISCQQhtLTQHIHTLQQQKTTLTQKLQSLC---KELDILQREQATIDTRTSAFRDLQGQLAHA 429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 745 KTVEEL-LETGLIQVATKEEELNAIRTENSSLTKEVQDLKAK--QNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAEL 821
Cdd:TIGR00618 430 KKQQELqQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEReqQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGS 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 822 LKVANKEKT-----------VQDLKQEIKALKEEIGNV----QLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEK 886
Cdd:TIGR00618 510 CIHPNPARQdidnpgpltrrMQRGEQTYAQLETSEEDVyhqlTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNL 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 887 EKDLANTGKWLQDLQEENESLKAHVQ------EVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKT 960
Cdd:TIGR00618 590 QNITVRLQDLTEKLSEAEDMLACEQHallrklQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRV 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 961 ---KLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVE 1037
Cdd:TIGR00618 670 lpkELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELM 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1038 AvelEAKEVLKKlfpkvsvpsnlSYSEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAET 1117
Cdd:TIGR00618 750 H---QARTVLKA-----------RTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSD 815
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 1118 EGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRRENKDIENLRREREHLE 1181
Cdd:TIGR00618 816 EDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLN 879
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
612-1294 |
2.49e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 49.02 E-value: 2.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 612 KDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIrlleEQLQH 691
Cdd:pfam01576 3 QEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQEL----EEILH 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 692 EISNKMEEFKilnDQNKALKLEVQKLQTLVseqpnKDVVEQMEkciQEKDEKLKTVEELLeTGLIQVATKEEELNAIRTE 771
Cdd:pfam01576 79 ELESRLEEEE---ERSQQLQNEKKKMQQHI-----QDLEEQLD---EEEAARQKLQLEKV-TTEAKIKKLEEDILLLEDQ 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 772 NSSLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKvanKEKTVQDLKQEIKALKEEIGNVQle 851
Cdd:pfam01576 147 NSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKK---EEKGRQELEKAKRKLEGESTDLQ-- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 852 kAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHV-QEVAQHNLKEVSSASQFEE 930
Cdd:pfam01576 222 -EQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLeSERAARNKAEKQRRDLGEE 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 931 LEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEE--------LLKVIS 1002
Cdd:pfam01576 301 LEALKTELEDTLDTTAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEqakrnkanLEKAKQ 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1003 EREKEISGLWNELDSL---KDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFPKVSVPSNL--SYSEWLHGFEKKAkecm 1077
Cdd:pfam01576 381 ALESENAELQAELRTLqqaKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSEleSVSSLLNEAEGKN---- 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1078 agTSGSEEVKVLEHKLKEADEmhtLLQLECE---KYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFT 1154
Cdd:pfam01576 457 --IKLSKDVSSLESQLQDTQE---LLQEETRqklNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKK 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1155 SSEQELERLRRENKDIENLRREREHLEMELEkaemERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLE 1234
Cdd:pfam01576 532 KLEEDAGTLEALEEGKKRLQRELEALTQQLE----EKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFD 607
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 383418275 1235 --LIQSKIVKAagdiTVIENSDVSpETESSEKETMSVSLNQTVTQLQQL---LQAVNQQLTKEKE 1294
Cdd:pfam01576 608 qmLAEEKAISA----RYAEERDRA-EAEAREKETRALSLARALEEALEAkeeLERTNKQLRAEME 667
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
354-982 |
3.16e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 48.50 E-value: 3.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 354 RCKQLTQEMMSEKERSNVVIARMKDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQ------------QVREQMEAEIAH 421
Cdd:TIGR00606 323 DCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLEldgfergpfserQIKNFHTLVIER 402
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 422 LKQENGILRDAVSNTTNQLESKQSAeLNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVq 501
Cdd:TIGR00606 403 QEDEAKTAAQLCADLQSKERLKQEQ-ADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQEL- 480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 502 syirkRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRVNKEeslqMQVQDILEQNEAL 581
Cdd:TIGR00606 481 -----RKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQME----MLTKDKMDKDEQI 551
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 582 KAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLKAEVQKL------- 654
Cdd:TIGR00606 552 RKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYedklfdv 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 655 ---QALANEQAAAAHELEKMQQSVYVKDDKIRLLE---EQLQHEISNKMEEFKILNDQNKALKLEVQKLQTLVSEQPNKd 728
Cdd:TIGR00606 632 cgsQDEESDLERLKEEIEKSSKQRAMLAGATAVYSqfiTQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK- 710
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 729 vVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLK---AKQNDQVSFASLVEELKKVIHE 805
Cdd:TIGR00606 711 -LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKndiEEQETLLGTIMPEEESAKVCLT 789
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 806 KDGKIKSVEELLEAELLKVANkektvqdlkqeikalkeeignvQLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEE 885
Cdd:TIGR00606 790 DVTIMERFQMELKDVERKIAQ----------------------QAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIEL 847
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 886 KEKdlantgkWLQDLQEENESLKAHVQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQD 965
Cdd:TIGR00606 848 NRK-------LIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEK 920
|
650
....*....|....*..
gi 383418275 966 VQDENKLFKSQIEQLKQ 982
Cdd:TIGR00606 921 DQQEKEELISSKETSNK 937
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
825-953 |
3.61e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.85 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 825 ANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLsitsqvQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEEN 904
Cdd:PRK12704 53 AIKKEALLEAKEEIHKLRNEFEKELRERRNEL------QKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQEL 126
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 383418275 905 ESLKAHVQE-VAQHN--LKEVSSASQFEELEIVLKEKENELKR-VEAMLKERE 953
Cdd:PRK12704 127 EKKEEELEElIEEQLqeLERISGLTAEEAKEILLEKVEEEARHeAAVLIKEIE 179
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
319-891 |
3.84e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.30 E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 319 LKKSSKGELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERSNVVIARMKDRIGTLEKEHNVFQNKIHVSY 398
Cdd:pfam12128 263 LHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETA 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 399 QETQQMQMKFQQVREQMEAEIAHLKQENGilrdAVSNTTNQLESKQSAELNKlrqDYARLVNEL-TEKTGKLQQEEVQKK 477
Cdd:pfam12128 343 AADQEQLPSWQSELENLEERLKALTGKHQ----DVTAKYNRRRSKIKEQNNR---DIAGIKDKLaKIREARDRQLAVAED 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 478 NAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHE------AAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 551
Cdd:pfam12128 416 DLQALESELREQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLLQLENFDERIERAREEQEAANAEVERLQSELR 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 552 QLmesEQKRVNKEESLQMQVQDILEQNEALKAQIQQF----HSQIA-AQTSASVLAEELHKVIA-----------EKDKQ 615
Cdd:pfam12128 496 QA---RKRRDQASEALRQASRRLEERQSALDELELQLfpqaGTLLHfLRKEAPDWEQSIGKVISpellhrtdldpEVWDG 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 616 IKQTEDSLANERDHLtsKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISN 695
Cdd:pfam12128 573 SVGGELNLYGVKLDL--KRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKN 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 696 KMEEFKILNDQNKALKLEVQklQTLVSEQpnKDVVEQMEKCIQEKDEKLKTVEELLEtgliqvATKEEELNAIRTENSSL 775
Cdd:pfam12128 651 ARLDLRRLFDEKQSEKDKKN--KALAERK--DSANERLNSLEAQLKQLDKKHQAWLE------EQKEQKREARTEKQAYW 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 776 TKEVQDLKAKqndqvsFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQ 855
Cdd:pfam12128 721 QVVEGALDAQ------LALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEV 794
|
570 580 590
....*....|....*....|....*....|....*..
gi 383418275 856 LSITSQVQELQNLLKGK-EEQMNTMKAVLEEKEKDLA 891
Cdd:pfam12128 795 LRYFDWYQETWLQRRPRlATQLSNIERAISELQQQLA 831
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
823-1240 |
5.36e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 5.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 823 KVANKEKTVQDLKQEIKALKEEIGnvQLEKAQQL-SITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQ 901
Cdd:COG4717 96 ELEELEEELEELEAELEELREELE--KLEKLLQLlPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELA 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 902 EENESLKAHVQEVAQHNLKEVSSAS-QFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFK------ 974
Cdd:COG4717 174 ELQEELEELLEQLSLATEEELQDLAeELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEarllll 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 975 --SQIEQLKQQNYQQASSFPPHEELLKVISerekeisGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFP 1052
Cdd:COG4717 254 iaAALLALLGLGGSLLSLILTIAGVLFLVL-------GLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1053 KVSVPSNLSYSEWLHGFEKkakecmagtsgSEEVKVLEHKLKEADEMHTLLQLEcEKYKSVLAET-----EGILQKLQRS 1127
Cdd:COG4717 327 ALGLPPDLSPEELLELLDR-----------IEELQELLREAEELEEELQLEELE-QEIAALLAEAgvedeEELRAALEQA 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1128 VEQEENKWKVKVDEShktikQMQSSFTSSEQELERLrrenkDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLN- 1206
Cdd:COG4717 395 EEYQELKEELEELEE-----QLEELLGELEELLEAL-----DEEELEEELEELEEELEELEEELEELREELAELEAELEq 464
|
410 420 430
....*....|....*....|....*....|....*...
gi 383418275 1207 ----ETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKI 1240
Cdd:COG4717 465 leedGELAELLQELEELKAELRELAEEWAALKLALELL 502
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
685-1251 |
5.82e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.74 E-value: 5.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 685 LEEQLQHEISNKMEEFKILNDQNKALKLEVQKLQtlvsEQPNKDVVeQMEKCIQEK-DEKLKTVEELLETGLIQVATKEE 763
Cdd:TIGR01612 534 IKAKLYKEIEAGLKESYELAKNWKKLIHEIKKEL----EEENEDSI-HLEKEIKDLfDKYLEIDDEIIYINKLKLELKEK 608
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 764 ELNaIRTENSSLTKEVqdlkakqndqvsfaslveELKKVIHEKDGKIKSVEELLEAELLK-VANKEKTVQDLKQEikalk 842
Cdd:TIGR01612 609 IKN-ISDKNEYIKKAI------------------DLKKIIENNNAYIDELAKISPYQVPEhLKNKDKIYSTIKSE----- 664
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 843 eeignvqLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLqeENESLKAHVQEVaqHNLKEV 922
Cdd:TIGR01612 665 -------LSKIYEDDIDALYNELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNM--ETATVELHLSNI--ENKKNE 733
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 923 SSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQAS-----------SF 991
Cdd:TIGR01612 734 LLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINidnikdedakqNY 813
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 992 PPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKK----NNERQQQVEAVELEAKEVLKKLFPKVSvpsnlsySEWLH 1067
Cdd:TIGR01612 814 DKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKfinfENNCKEKIDSEHEQFAELTNKIKAEIS-------DDKLN 886
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1068 GFEKK---AKECMAGTSGSEEvkvlehklKEADEMHTLLQLecEKYKSVLAETEGILQKLQrsveQEENKWKVKVDESHK 1144
Cdd:TIGR01612 887 DYEKKfndSKSLINEINKSIE--------EEYQNINTLKKV--DEYIKICENTKESIEKFH----NKQNILKEILNKNID 952
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1145 TIKQMQSSFTSSEQELERLRRENKDienlrrerehlemELEKA--EMERSTYVTEVRELKAQLNETLTKLRTeqNERQKV 1222
Cdd:TIGR01612 953 TIKESNLIEKSYKDKFDNTLIDKIN-------------ELDKAfkDASLNDYEAKNNELIKYFNDLKANLGK--NKENML 1017
|
570 580
....*....|....*....|....*....
gi 383418275 1223 AGDLHKAQQSLELIQSKIVKAAGDITVIE 1251
Cdd:TIGR01612 1018 YHQFDEKEKATNDIEQKIEDANKNIPNIE 1046
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
929-1049 |
7.73e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.08 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 929 EELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQassfppHEELLKVISEREKE- 1007
Cdd:PRK12704 71 NEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKK------EEELEELIEEQLQEl 144
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 383418275 1008 --ISGLWNE------LDSLKDAVEHqrkknnERQQQVEAVELEAKEVLKK 1049
Cdd:PRK12704 145 erISGLTAEeakeilLEKVEEEARH------EAAVLIKEIEEEAKEEADK 188
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
305-1286 |
9.10e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.35 E-value: 9.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 305 VDLLK--EKSGVIQDALKKSSKGELTtlvHQLQEKDKLLAAVKEDAAAT-KDRCKQLTQEMMSEKERSNVVIARMKDRIG 381
Cdd:TIGR01612 623 IDLKKiiENNNAYIDELAKISPYQVP---EHLKNKDKIYSTIKSELSKIyEDDIDALYNELSSIVKENAIDNTEDKAKLD 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 382 TLekehnvfQNKIHVSYQETQQMQMkfqqvrEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNE 461
Cdd:TIGR01612 700 DL-------KSKIDKEYDKIQNMET------ATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKE 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 462 LTEKTGKLQQEEVQKKNAEQAVTQLKVQL-----------QEAERRWEEVQSYIR----------KRTAEHEAAQQDLQS 520
Cdd:TIGR01612 767 LSNKINDYAKEKDELNKYKSKISEIKNHYndqinidnikdEDAKQNYDKSKEYIKtisikedeifKIINEMKFMKDDFLN 846
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 521 K---FVAKEN----EVQSLHSKLTDtLVSKQQLEQRLMQLMESEqKRVNKEESLqmqvqdILEQNEALKAQIQQFHSQia 593
Cdd:TIGR01612 847 KvdkFINFENnckeKIDSEHEQFAE-LTNKIKAEISDDKLNDYE-KKFNDSKSL------INEINKSIEEEYQNINTL-- 916
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 594 aqtsasvlaeelhKVIAEKDKQIKQTEDSLANERDHLTSKEEEL----KDIQNMNFLLKAEVQKLQALANEQAAaahELE 669
Cdd:TIGR01612 917 -------------KKVDEYIKICENTKESIEKFHNKQNILKEILnkniDTIKESNLIEKSYKDKFDNTLIDKIN---ELD 980
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 670 KMqqsvyvkddkirLLEEQLQHEISNKMEEFKILNDQNKalKLEVQKLQTLVSE-QPNKDVVEQMEKCIQEKDEKLKTVE 748
Cdd:TIGR01612 981 KA------------FKDASLNDYEAKNNELIKYFNDLKA--NLGKNKENMLYHQfDEKEKATNDIEQKIEDANKNIPNIE 1046
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 749 ELLETGLIQVAtkEEELNAIRTENSSLTKEVqdLKAKQNDQVSFASLVEELKkvIHEKDGKIKSVEELLEAELLKVANKE 828
Cdd:TIGR01612 1047 IAIHTSIYNII--DEIEKEIGKNIELLNKEI--LEEAEINITNFNEIKEKLK--HYNFDDFGKEENIKYADEINKIKDDI 1120
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 829 KTV-QDLKQEIKALkEEIGNVQLEKAQQlsITSQVQELQNL---------LKGKEEQMNTMKAVLEEKEKDLANTGKWLQ 898
Cdd:TIGR01612 1121 KNLdQKIDHHIKAL-EEIKKKSENYIDE--IKAQINDLEDVadkaisnddPEEIEKKIENIVTKIDKKKNIYDEIKKLLN 1197
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 899 DLQEEnESLKAHVQEVAQHNLKEVSSASQF--EELEIVLKEKENELKRVEAML------KERESDLSSKTKLLQDVQDEN 970
Cdd:TIGR01612 1198 EIAEI-EKDKTSLEEVKGINLSYGKNLGKLflEKIDEEKKKSEHMIKAMEAYIedldeiKEKSPEIENEMGIEMDIKAEM 1276
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 971 KLF------------------------KSQIEQLKQQNYQQASSFPPHEELLKVISEREK----------EISGLWN--E 1014
Cdd:TIGR01612 1277 ETFnishdddkdhhiiskkhdenisdiREKSLKIIEDFSEESDINDIKKELQKNLLDAQKhnsdinlylnEIANIYNilK 1356
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1015 LDSLKDAVEHQRKKNNERQQQVEAV--ELEAKEVLKKlfpkvSVPSNLSYSEWLHGFE-----KKAKECMAGTSGSEEVK 1087
Cdd:TIGR01612 1357 LNKIKKIIDEVKEYTKEIEENNKNIkdELDKSEKLIK-----KIKDDINLEECKSKIEstlddKDIDECIKKIKELKNHI 1431
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1088 VLEHK-----LKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEE----NKWKVKVDESHKTIKQMQSSFTSSEQ 1158
Cdd:TIGR01612 1432 LSEESnidtyFKNADENNENVLLLFKNIEMADNKSQHILKIKKDNATNDHdfniNELKEHIDKSKGCKDEADKNAKAIEK 1511
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1159 ELERLRRENKDIENLRREREHLEME--LEKAEMERSTYVTEVRELKAQL----NETLTKLRTEQNERQKVAGDLHK---- 1228
Cdd:TIGR01612 1512 NKELFEQYKKDVTELLNKYSALAIKnkFAKTKKDSEIIIKEIKDAHKKFileaEKSEQKIKEIKKEKFRIEDDAAKndks 1591
|
1050 1060 1070 1080 1090 1100
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 1229 ------AQQSLELIQSKIVKAAgDITVIENsDVSPETESSEKETMSVSLNQTVTQLQQLLQAVN 1286
Cdd:TIGR01612 1592 nkaaidIQLSLENFENKFLKIS-DIKKKIN-DCLKETESIEKKISSFSIDSQDTELKENGDNLN 1653
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
411-641 |
1.07e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 411 VREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDyarlvNELTEKTGKLQQEEVQKKNAEQAVTQLKVQL 490
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQK-----NGLVDLSEEAKLLLQQLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 491 QEAERRWEEVQSYIRKRTAEHEAAQQDlqskfvakeNEVQSLHSKLtdtlvskQQLEQRLMQLmeseQKRVNKEESlqmQ 570
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPELLQS---------PVIQQLRAQL-------AELEAELAEL----SARYTPNHP---D 292
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 383418275 571 VQDILEQNEALKAQIQQFHSQIAAQTSASVlaeelhKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQ 641
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAEL------EALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
730-1042 |
1.69e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 730 VEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKeVQDLKAKQND--QVSFASLVEELKKVIHEKD 807
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER-YQALLKEKREyeGYELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 808 GKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEI----GNVQLE-KAQQLSITSQVQELQNLLKGKEEQMntmkav 882
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIkdlgEEEQLRvKEKIGELEAEIASLERSIAEKEREL------ 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 883 lEEKEKDLANTGKWLQDLQEENESLKahvQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKL 962
Cdd:TIGR02169 318 -EDAEERLAKLEAEIDKLLAEIEELE---REIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 963 LQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEisgLWNELDSLKDAVEHQRKKNNERQQQVEAVELE 1042
Cdd:TIGR02169 394 LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE---LEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
829-1238 |
1.81e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 829 KTVQDLKQEIKALKEEIgnvqlekAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENEslk 908
Cdd:COG4717 64 RKPELNLKELKELEEEL-------KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQE--- 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 909 ahvqevaqhnlkevssasqFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQA 988
Cdd:COG4717 134 -------------------LEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 989 SSFP-PHEELLKVISEREKEISGLWNELDSLKDAVE-----HQRKKNNERQQQVEAVELEAKEVLKKLFPKVSVPSNLSY 1062
Cdd:COG4717 195 QDLAeELEELQQRLAELEEELEEAQEELEELEEELEqleneLEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1063 SE-----------WLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQL---ECEKYKSVLAETEGILQKLQRSV 1128
Cdd:COG4717 275 IAgvlflvlgllaLLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALglpPDLSPEELLELLDRIEELQELLR 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1129 EQEENKWKVKVDESHKTIKQ-MQSSFTSSEQELERLRRENKDIENLRREREHLEMELEKA--EMERSTYVTEVRELKAQL 1205
Cdd:COG4717 355 EAEELEEELQLEELEQEIAAlLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELlgELEELLEALDEEELEEEL 434
|
410 420 430
....*....|....*....|....*....|...
gi 383418275 1206 NETLTKLRTEQNERQKVAGDLHKAQQSLELIQS 1238
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAELEQLEE 467
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
730-1293 |
2.36e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.84 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 730 VEQMEKCIQEKDEKLKTVEELLETG--LIQVAT--KEEELNAIRTENSSLTKEVQDLK-AKQNDQVSFASL--VEELKKV 802
Cdd:COG5022 877 VELAERQLQELKIDVKSISSLKLVNleLESEIIelKKSLSSDLIENLEFKTELIARLKkLLNNIDLEEGPSieYVKLPEL 956
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 803 --IHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGnvqlekaqqlSITSQVQELQNLLKGKEEqMNTMK 880
Cdd:COG5022 957 nkLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELA----------ELSKQYGALQESTKQLKE-LPVEV 1025
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 881 AVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNlKEVSSASQFEELEIVLKEKENELKRVEAMLKE-RESDLSSK 959
Cdd:COG5022 1026 AELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQ-ARYKALKLRRENSLLDDKQLYQLESTENLLKTiNVKDLEVT 1104
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 960 TKLLqdVQDENKLFKSQIEQLKQQNYQQASSFPPheELLKVISEREKEISGLWNELDSLKDAVEHQRK--------KNNE 1031
Cdd:COG5022 1105 NRNL--VKPANVLQFIVAQMIKLNLLQEISKFLS--QLVNTLEPVFQKLSVLQLELDGLFWEANLEALpspppfaaLSEK 1180
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1032 RQQQVEAVELEAK---EVLKKLFPKVSVPSNLSYSEWLHGFEKK--AKECMAGTSGSEevkvlehKLKEADEMHTLLQLE 1106
Cdd:COG5022 1181 RLYQSALYDEKSKlssSEVNDLKNELIALFSKIFSGWPRGDKLKklISEGWVPTEYST-------SLKGFNNLNKKFDTP 1253
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1107 CEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTS---SEQELERLRRENKDIENL-----RRERE 1178
Cdd:COG5022 1254 ASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRtkaSSLRWKSATEVNYNSEELddwcrEFEIS 1333
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1179 HLEMELEkaEMERSTYVTEVRELKAQLNETLTKLRTEQN--ERQKVAGDLHKAQQSLELIQSKIVKAAGDITVIENSDVS 1256
Cdd:COG5022 1334 DVDEELE--ELIQAVKVLQLLKDDLNKLDELLDACYSLNpaEIQNLKSRYDPADKENNLPKEILKKIEALLIKQELQLSL 1411
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 383418275 1257 PETES---------SEKETMsVSLNQTVTQLQQLLQAVNQQLTKEK 1293
Cdd:COG5022 1412 EGKDEtevhlseifSEEKSL-ISLDRNSIYKEEVLSSLSALLTKEK 1456
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
320-621 |
2.74e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.44 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 320 KKSSKGELTTLVHQLQEKDKLLAAVKEDAAATKDRCKQLTQEMMSEKERsnvvIARMKDRIGTLEKEHNVFQNKIHVSYQ 399
Cdd:TIGR02169 669 SRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK----IGEIEKEIEQLEQEEEKLKERLEELEE 744
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 400 ETQQMQMKFQQVREQM---EAEIAHLKQENGILRDAVSN-----------TTNQLESKQSAE--------------LNKL 451
Cdd:TIGR02169 745 DLSSLEQEIENVKSELkelEARIEELEEDLHKLEEALNDlearlshsripEIQAELSKLEEEvsriearlreieqkLNRL 824
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 452 RQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQ----------SYIRKRTAEHEAAQQDLQSK 521
Cdd:TIGR02169 825 TLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEaalrdlesrlGDLKKERDELEAQLRELERK 904
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 522 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQL------MESEQKRVNKEESLQMQVQDILEQNEALK----AQIQQFHSQ 591
Cdd:TIGR02169 905 IEELEAQIEKKRKRLSELKAKLEALEEELSEIedpkgeDEEIPEEELSLEDVQAELQRVEEEIRALEpvnmLAIQEYEEV 984
|
330 340 350
....*....|....*....|....*....|
gi 383418275 592 IAAQTSasvLAEELHKVIAEKDKQIKQTED 621
Cdd:TIGR02169 985 LKRLDE---LKEKRAKLEEERKAILERIEE 1011
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
995-1300 |
4.50e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.54 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 995 EELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFpkvsvpsnlsysewlhgfekkak 1074
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEY----------------------- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1075 ecmagtSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLqrsvEQEENKWKVKVDESHKTIKQMQSSFT 1154
Cdd:COG1196 292 ------ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEEL----EEELEELEEELEEAEEELEEAEAELA 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1155 SSEQELERLRRENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLE 1234
Cdd:COG1196 362 EAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE 441
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 383418275 1235 LIQSKIVKAAGDItviensdvspETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEKEHYQVLE 1300
Cdd:COG1196 442 EALEEAAEEEAEL----------EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL 497
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
377-556 |
4.78e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 377 KDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMEA-------------------EIAHLKQEngilRDAVSNTT 437
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREAlqrlaeyswdeidvasaerEIAELEAE----LERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 438 NQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYI---RKRTAEHEAA 514
Cdd:COG4913 685 DDLAALE-EQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALleeRFAAALGDAV 763
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 383418275 515 QQDLQSKFvakENEVQSLHSKLtdtlvskQQLEQRLMQLMES 556
Cdd:COG4913 764 ERELRENL---EERIDALRARL-------NRAEEELERAMRA 795
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
1154-1276 |
4.95e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 44.69 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1154 TSSEQELERLRREnkdIENLRREREHLEMELEKAEMERstyVTEVRELKAQLNETLTKLRTE-QNERQKVAGdlhkaqqs 1232
Cdd:COG0542 407 DSKPEELDELERR---LEQLEIEKEALKKEQDEASFER---LAELRDELAELEEELEALKARwEAEKELIEE-------- 472
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 383418275 1233 LELIQSKIVKAAGDITVIENSDVSPETESSEKETMsvsLNQTVT 1276
Cdd:COG0542 473 IQELKEELEQRYGKIPELEKELAELEEELAELAPL---LREEVT 513
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
412-621 |
5.42e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.44 E-value: 5.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDY-------ARLVN-ELTEKTGKLQQEEVQKKNAEQAV 483
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETNGQAQrdaileeSRAVTkELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 484 TQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRVNK 563
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383418275 564 EESLQMQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQIKQTED 621
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDES 1777
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
512-1031 |
6.09e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 44.04 E-value: 6.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 512 EAAQQDLQSKfvakENEVQSLHSKLtDTLVSKQQ-LEQRLMQLMESEQKRVNKEESLQMQVQDI---LEQNEALKAQIQQ 587
Cdd:pfam10174 292 DQLKQELSKK----ESELLALQTKL-ETLTNQNSdCKQHIEVLKESLTAKEQRAAILQTEVDALrlrLEEKESFLNKKTK 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 588 FHSQIAAQTSAsvLAEELHKV---IAEKDKQIKQTEDSLANERDHLTSKEEELKDiqnmnflLKAEVQKLQALANEQAAA 664
Cdd:pfam10174 367 QLQDLTEEKST--LAGEIRDLkdmLDVKERKINVLQKKIENLQEQLRDKDKQLAG-------LKERVKSLQTDSSNTDTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 665 aheLEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEFKILNDQNKALKLEVQKLQTLVSEQ-----PNKDVVEQMEKCIQE 739
Cdd:pfam10174 438 ---LTTLEEALSEKERIIERLKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKessliDLKEHASSLASSGLK 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 740 KDEKLKTVEelletglIQVATKEEELNAIrtenssltkEVQDLKAKQndqvsfASLVEELKKVIHEKdgkiksveellea 819
Cdd:pfam10174 515 KDSKLKSLE-------IAVEQKKEECSKL---------ENQLKKAHN------AEEAVRTNPEINDR------------- 559
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 820 ellkvankektVQDLKQEIKALKEEIGNVQLEKAQQLSITSQVQELQNLlkgKEEQMNTMKAVLEEKEKDLANTGKWLQD 899
Cdd:pfam10174 560 -----------IRLLEQEVARYKEESGKAQAEVERLLGILREVENEKND---KDKKIAELESLTLRQMKEQNKKVANIKH 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 900 LQEENESLKAHVQEVA---QHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQ 976
Cdd:pfam10174 626 GQQEMKKKGAQLLEEArrrEDNLADNSQQLQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEE 705
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 383418275 977 IEQLKQqnyqqassfpphEELLKVISEREKEISGLwnELDSLKdavehqRKKNNE 1031
Cdd:pfam10174 706 ILEMKQ------------EALLAAISEKDANIALL--ELSSSK------KKKTQE 740
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
920-1293 |
6.48e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.96 E-value: 6.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 920 KEVSSASQFEELEIVLKEKENELKRVEAMLkerESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLK 999
Cdd:pfam05557 3 ELIESKARLSQLQNEKKQMELEHKRARIEL---EKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1000 VISEREKEISGLWNELDSLK-DAVEHQRKKNNE---RQQQVEAVELEAKEVLKKLfpkvsvpsnlsysewlhgfekkakE 1075
Cdd:pfam05557 80 LKKKYLEALNKKLNEKESQLaDAREVISCLKNElseLRRQIQRAELELQSTNSEL------------------------E 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1076 CMagtsgSEEVKVLEHKLKEADEmhtlLQLECEKYKSVLAETEGILQKLQRSVEQEENkWKVKVdeshKTIKQMQSSFTS 1155
Cdd:pfam05557 136 EL-----QERLDLLKAKASEAEQ----LRQNLEKQQSSLAEAEQRIKELEFEIQSQEQ-DSEIV----KNSKSELARIPE 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1156 SEQELERLRRENKDIENLRREREHLEMELE--KAEMERstyVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSL 1233
Cdd:pfam05557 202 LEKELERLREHNKHLNENIENKLLLKEEVEdlKRKLER---EEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNLRSP 278
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1234 ELIQSKIVKaagditvIENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEK 1293
Cdd:pfam05557 279 EDLSRRIEQ-------LQQREIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLN 331
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1089-1235 |
6.65e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 6.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1089 LEHKLKEADEmhtlLQLECEKYKSVLAETEGILQKLQRsvEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRRENK 1168
Cdd:COG4913 612 LAALEAELAE----LEEELAEAEERLEALEAELDALQE--RREALQRLAEYSWDEIDVASAEREIAELEAELERLDASSD 685
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 383418275 1169 DIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQnERQKVAGDLHKAQQSLEL 1235
Cdd:COG4913 686 DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQ-DRLEAAEDLARLELRALL 751
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
468-638 |
7.83e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 7.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 468 KLQQEEVQKKNAEQaVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSkfvakENEVQSLHskltdtlvskQQLE 547
Cdd:PRK04863 501 LLRRLREQRHLAEQ-LQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD-----EDELEQLQ----------EELE 564
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 548 QRLMQLmeSEQKRVNKEEslQMQVQDILEQneaLKAQIQQFHSQ----IAAQTSASVLAEELHKVIAEK---DKQIKQT- 619
Cdd:PRK04863 565 ARLESL--SESVSEARER--RMALRQQLEQ---LQARIQRLAARapawLAAQDALARLREQSGEEFEDSqdvTEYMQQLl 637
|
170 180
....*....|....*....|.
gi 383418275 620 --EDSLANERDHLTSKEEELK 638
Cdd:PRK04863 638 erERELTVERDELAARKQALD 658
|
|
| PRK00106 |
PRK00106 |
ribonuclease Y; |
825-967 |
8.08e-04 |
|
ribonuclease Y;
Pssm-ID: 178867 [Multi-domain] Cd Length: 535 Bit Score: 43.70 E-value: 8.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 825 ANKEKTVQDLKQEIKALKEEIGNVQLEKAQQL-SITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEE 903
Cdd:PRK00106 68 ALKKELLLEAKEEARKYREEIEQEFKSERQELkQIESRLTERATSLDRKDENLSSKEKTLESKEQSLTDKSKHIDEREEQ 147
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 383418275 904 NESLkahvQEVAQHNLKEVSSASQFEELEIVLKEKENEL--------KRVEAMLKEReSDLSSKTKLLQDVQ 967
Cdd:PRK00106 148 VEKL----EEQKKAELERVAALSQAEAREIILAETENKLtheiatriREAEREVKDR-SDKMAKDLLAQAMQ 214
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
799-1293 |
8.15e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.86 E-value: 8.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNvqlEKAQQLSITSQVQELQNLLKGKEEQMNT 878
Cdd:TIGR04523 45 IKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKK---NKDKINKLNSDLSKINSEIKNDKEQKNK 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 879 MKAVLEEKEKDLANTGKWLQDLQEENESLKahvQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSS 958
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKE---KELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 959 KTKLLQDVQ---DENKLFKSQIEQLKQQNYQQASSFpphEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQ 1035
Cdd:TIGR04523 199 LELLLSNLKkkiQKNKSLESQISELKKQNNQLKDNI---EKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKE 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1036 VEavelEAKEVLKKLfpkvsvpsnlsysewlhgfekkakecmagtsgSEEVKVLEHKLKEademhtllqLECEKYKSVLA 1115
Cdd:TIGR04523 276 LE----QNNKKIKEL--------------------------------EKQLNQLKSEISD---------LNNQKEQDWNK 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1116 ETEGILQKLQRSVEQEENKwkvkVDESHKTIKQMQSSFTSSEQELERLRRENKDIenlRREREHLEMELEKAEMERSTYV 1195
Cdd:TIGR04523 311 ELKSELKNQEKKLEEIQNQ----ISQNNKIISQLNEQISQLKKELTNSESENSEK---QRELEEKQNEIEKLKKENQSYK 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1196 TEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVKAAGDITVIENSDVSPETESSEKETMSVSLNQTV 1275
Cdd:TIGR04523 384 QEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTR 463
|
490
....*....|....*...
gi 383418275 1276 TQLQQLLQAVNQQLTKEK 1293
Cdd:TIGR04523 464 ESLETQLKVLSRSINKIK 481
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
885-1294 |
8.90e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.79 E-value: 8.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 885 EKEKDLANTgkwLQDLQEENESLKAHVQEVAQHNLKEvssasqfEELEIVLKEKENELKRVEAMLKEREsdlssktKLLQ 964
Cdd:COG3096 289 ELRRELFGA---RRQLAEEQYRLVEMARELEELSARE-------SDLEQDYQAASDHLNLVQTALRQQE-------KIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 965 DVQDENKLfksqIEQLKQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVElEAK 1044
Cdd:COG3096 352 YQEDLEEL----TERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALE-KAR 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1045 EVLKKlfPKVSvPSNLSysEWLHGFEKKAKEcmagtsGSEEVKVLEHKLKEADEMHTllqleceKYKSVLAETEGILQKL 1124
Cdd:COG3096 427 ALCGL--PDLT-PENAE--DYLAAFRAKEQQ------ATEEVLELEQKLSVADAARR-------QFEKAYELVCKIAGEV 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1125 QRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRRENKDIENLRRE-----------REHLEMELEKAEMER-- 1191
Cdd:COG3096 489 ERSQAWQTARELLRRYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLEEfcqrigqqldaAEELEELLAELEAQLee 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1192 -STYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKivkaagditviensdvspetesseketmsvs 1270
Cdd:COG3096 569 lEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALERLREQ------------------------------- 617
|
410 420
....*....|....*....|....
gi 383418275 1271 LNQTVTQLQQLLQAVNQQLTKEKE 1294
Cdd:COG3096 618 SGEALADSQEVTAAMQQLLERERE 641
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
731-1023 |
9.05e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 43.76 E-value: 9.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 731 EQMEK--CIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTEN-SSLTKEVQDLKAKQNDQVSFASLVEELKKVIhekd 807
Cdd:PRK05771 4 VRMKKvlIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRKlRSLLTKLSEALDKLRSYLPKLNPLREEKKKV---- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 808 gKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSQVQELQNLLKGKeeqmnTMKAVLEEKE 887
Cdd:PRK05771 80 -SVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGNFDLDLSLLLGFK-----YVSVFVGTVP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 888 KDlantgkwlQDLQEENESLKAHVQEVAQHNLKE----VSSASQFEELEIVLkeKENELKRVEAmlkereSDLSSKTKLL 963
Cdd:PRK05771 154 ED--------KLEELKLESDVENVEYISTDKGYVyvvvVVLKELSDEVEEEL--KKLGFERLEL------EEEGTPSELI 217
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 964 QDVQDENKLFKSQIEQLKqqnyqqassfpphEELLKVISEREKEISGLWNELDSLKDAVE 1023
Cdd:PRK05771 218 REIKEELEEIEKERESLL-------------EELKELAKKYLEELLALYEYLEIELERAE 264
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
667-1294 |
9.30e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 9.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 667 ELEKMQQSVYVKDDK----IRLLEEQLQHEISNKMEEFKILNDQNKALklEVQKLQTLVSEQPNKDVVEQMEKCIQEKDE 742
Cdd:PTZ00121 1138 DARKAEEARKAEDAKrveiARKAEDARKAEEARKAEDAKKAEAARKAE--EVRKAEELRKAEDARKAEAARKAEEERKAE 1215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 743 KLKTVEELLETGLIQVA--TKEEELNAIRTENSSLTKEVQdlKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAE 820
Cdd:PTZ00121 1216 EARKAEDAKKAEAVKKAeeAKKDAEEAKKAEEERNNEEIR--KFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAD 1293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 821 LLKVANKEKTVQDLKQeiKALKEEIGNVQLEKAQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDL 900
Cdd:PTZ00121 1294 EAKKAEEKKKADEAKK--KAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEK 1371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 901 QEENESLKAhvqEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKERESdlssKTKLLQDVQDENKLFKSQIEQL 980
Cdd:PTZ00121 1372 KKEEAKKKA---DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADE----AKKKAEEKKKADEAKKKAEEAK 1444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 981 KQQNYQQASSFPPHEELLKVISEREKEISGLWNELDSLKDAVEHQRKKNNERQQqveAVELEAKEVLKKLFPKVSVPSNL 1060
Cdd:PTZ00121 1445 KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKK---ADEAKKAAEAKKKADEAKKAEEA 1521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1061 SYSEWLHGFEKKAKECMAgtSGSEEVKVLEhKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVD 1140
Cdd:PTZ00121 1522 KKADEAKKAEEAKKADEA--KKAEEKKKAD-ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVM 1598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1141 ESHKTIKQMQSSFTSSEQELERLRRENKDIENLRREREhlemELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQ 1220
Cdd:PTZ00121 1599 KLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVE----QLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDK 1674
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 1221 KVAGDLHKAQQSLELIQSKIVKAAGDITVIENSDVSPETESSEKETMSVSLNQTVTQLQQLLQAVNQQLTKEKE 1294
Cdd:PTZ00121 1675 KKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
|
| COG4487 |
COG4487 |
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown]; |
863-1052 |
1.08e-03 |
|
Uncharacterized conserved protein, contains DUF2130 domain [Function unknown];
Pssm-ID: 443580 [Multi-domain] Cd Length: 425 Bit Score: 43.01 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 863 QELQNLLKGKEEQMNTMKAVLEEKEKDLANT-----GKWLQDLQEENESLKAHVQEVAQHNLKEVssASQFEELEIVLKE 937
Cdd:COG4487 29 AEFEKELAERLADAAKREAALELAEAKAKAQlqeqvAEKDAEIAELRARLEAEERKKALAVAEEK--EKELAALQEALAE 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 938 KENEL-----KRVEAMLKERESDLSSKTKLLQ---DVQDENKLFKSQIEQLKQQNYQQASSfppheelLKViSEREKEIS 1009
Cdd:COG4487 107 KDAKLaelqaKELELLKKERELEDAKREAELTvekERDEELDELKEKLKKEEEEKQLAEKS-------LKV-AEYEKQLK 178
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 383418275 1010 GLWNELDSLKDAVEHQrkknnERQQQVEAVELEAKEVLKKLFP 1052
Cdd:COG4487 179 DMQEQIEELKRKKEQG-----STQLQGEVLELEFEELLATAFP 216
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
482-1222 |
1.30e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.42 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 482 AVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRV 561
Cdd:pfam02463 163 AGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKL--KEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERID 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 562 NKEESLQMQVQDILEQNealkaQIQQFHSQIAAQTSASVLAEElhKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQ 641
Cdd:pfam02463 241 LLQELLRDEQEEIESSK-----QEIEKEEEKLAQVLKENKEEE--KEKKLQEEELKLLAKEEEELKSELLKLERRKVDDE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 642 NMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVK---DDKIRLLEEQLQHEISNKMEEFKILNDQNKALKLEVQKLQ 718
Cdd:pfam02463 314 EKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKreaEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 719 TLVSEQPNKDVVEQMEKcIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVEE 798
Cdd:pfam02463 394 EEELELKSEEEKEAQLL-LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQ----LSITSQVQELQNLLKGKEE 874
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGrlgdLGVAVENYKVAISTAVIVE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 875 QMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEVSSASQFEELEIVLKEKENELKRVEAMLKER-- 952
Cdd:pfam02463 553 VSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKdt 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 953 -----------------------ESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELLKVISEREKEIS 1009
Cdd:pfam02463 633 eltklkesakakesglrkgvsleEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEEL 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1010 GLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYsewlhgfEKKAKECMAGTSGSEEVKVL 1089
Cdd:pfam02463 713 KKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEE-------KSELSLKEKELAEEREKTEK 785
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1090 EHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRRENKD 1169
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITK 865
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 383418275 1170 IENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKV 1222
Cdd:pfam02463 866 EELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENE 918
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
774-1282 |
1.41e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 42.97 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 774 SLTKEVQDLKAKQNDQVSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIK---ALKEEIGNVQL 850
Cdd:PRK01156 177 MLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNelsSLEDMKNRYES 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 851 EKAQQLSITSQVQELQNLLKGKEEQMN--TMKAVLEEKEK--DLANTGKWLQDLQEENESLKAHVQEVaQHNLKEVSSAS 926
Cdd:PRK01156 257 EIKTAESDLSMELEKNNYYKELEERHMkiINDPVYKNRNYinDYFKYKNDIENKKQILSNIDAEINKY-HAIIKKLSVLQ 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 927 QFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLFKSQIEQLKQQNYQQAS-SFPPHEELLKVISERE 1005
Cdd:PRK01156 336 KDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKiQEIDPDAIKKELNEIN 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1006 KEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVL--KKLFPKVSVPSNLSYSEWLHGFEKKAKECMAGTSGS 1083
Cdd:PRK01156 416 VKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVcgTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDI 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1084 EEVKVLEHKLKEADEMHTLLQLECE--KYKSVLAETEGILQKLQRSVEQEENKWKVKVDESHKTIKQMQSSFTSSEQELE 1161
Cdd:PRK01156 496 DEKIVDLKKRKEYLESEEINKSINEynKIESARADLEDIKIKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1162 RlrRENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIV 1241
Cdd:PRK01156 576 V--ISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEKLRGKID 653
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 383418275 1242 KAAGDITVIENSDVSPETESSEKETMSVSLNQTVTQLQQLL 1282
Cdd:PRK01156 654 NYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAK 694
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
412-532 |
1.42e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 412 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNA-------EQAVT 484
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALglplpasAEEFA 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 383418275 485 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 532
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
737-915 |
1.44e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.83 E-value: 1.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 737 IQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQvsfASLVEELKKVIHEKDGKIKSVEel 816
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL---ELEIEEVEARIKKYEEQLGNVR-- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 817 leaellkvanKEKTVQDLKQEIKALKEEIGnvQLEKaQQLSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTgkw 896
Cdd:COG1579 87 ----------NNKEYEALQKEIESLKRRIS--DLED-EILELMERIEELEEELAELEAELAELEAELEEKKAELDEE--- 150
|
170
....*....|....*....
gi 383418275 897 LQDLQEENESLKAHVQEVA 915
Cdd:COG1579 151 LAELEAELEELEAEREELA 169
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
561-988 |
2.50e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 2.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 561 VNKEESLQMQVQDILEQNEALKAQIQQF-HSQIAAQTSASvlAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKD 639
Cdd:COG4717 15 RDRTIEFSPGLNVIYGPNEAGKSTLLAFiRAMLLERLEKE--ADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 640 IQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQsVYVKDDKIRLLEEQLQH------EISNKMEEFKILNDQNKALKLE 713
Cdd:COG4717 93 LQEELEELEEELEELEAELEELREELEKLEKLLQ-LLPLYQELEALEAELAElperleELEERLEELRELEEELEELEAE 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 714 VQKLQTLVSEQPNkDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQ---- 789
Cdd:COG4717 172 LAELQEELEELLE-QLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKearl 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 790 --------VSFASLVEELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSIT-- 859
Cdd:COG4717 251 llliaaalLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALgl 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 860 -------------SQVQELQNLLKGKEEQMNTMKAVLEEKEK-------------DLANTGKWLQDLQEENESLKAHVQE 913
Cdd:COG4717 331 ppdlspeellellDRIEELQELLREAEELEEELQLEELEQEIaallaeagvedeeELRAALEQAEEYQELKEELEELEEQ 410
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 383418275 914 VAQHN--LKEVSSASQFEELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQDENKLF--KSQIEQLKQQNYQQA 988
Cdd:COG4717 411 LEELLgeLEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAelLQELEELKAELRELA 489
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
468-801 |
2.86e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 468 KLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 547
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 548 QRLMQLmesEQKRVNKEEslqmQVQDILEQNEALKAQIQQFHSQIAAQTSASVLA--EELHKVIAEK--DKQIKQTEDSL 623
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAaqEKIHVEILEEqlEKLRNELLIRG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 624 ANERDHLTSKEEELKDIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLqheISNKMEEFKIL 703
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 704 NDQNKALKLEVQKLQTLVSEQPNKdvVEQMEKCIQEKDEKLKTVEELLET--------------GLIQVATK--EEELNA 767
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQDLRDKVDKLEASlkeanvskfssykvELLQQKLKllEERLQA 369
|
330 340 350
....*....|....*....|....*....|....
gi 383418275 768 IRTENSSLTKEVQDLKAKQNDQVSfaSLVEELKK 801
Cdd:PLN02939 370 SDHEIHSYIQLYQESIKEFQDTLS--KLKEESKK 401
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
668-1234 |
3.02e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 3.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 668 LEKMQQSVYVKDDKIRLLEEQLQHEISNKMEEfKILNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTV 747
Cdd:PRK02224 182 LSDQRGSLDQLKAQIEEKEEKDLHERLNGLES-ELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEI 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 748 EELLETgliqVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLveelkkviheKDGKIKSVEELLEAELLKVANK 827
Cdd:PRK02224 261 EDLRET----IAETEREREELAEEVRDLRERLEELEEERDDLLAEAGL----------DDADAEAVEARREELEDRDEEL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 828 EKTVQDLKQEIKALKEEIGnvqlekaqqlSITSQVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESL 907
Cdd:PRK02224 327 RDRLEECRVAAQAHNEEAE----------SLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 908 KAHVQEvaqhnlkevsSASQFEELEIVLKEKENELKRVEAMLKERESDLSSktklLQDVQDENKLFksqIEQLKQQNYQQ 987
Cdd:PRK02224 397 RERFGD----------APVDLGNAEDFLEELREERDELREREAELEATLRT----ARERVEEAEAL---LEAGKCPECGQ 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 988 ASSFPPHEEllkVISEREKEISGLWNELDSLKDAVEHQRKKNNerqQQVEAVELEAKevLKKLFPKVSVPSNLsYSEWLH 1067
Cdd:PRK02224 460 PVEGSPHVE---TIEEDRERVEELEAELEDLEEEVEEVEERLE---RAEDLVEAEDR--IERLEERREDLEEL-IAERRE 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1068 GFEKKAKECmagTSGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEEnkwkvkvdeshkTIK 1147
Cdd:PRK02224 531 TIEEKRERA---EELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLE------------RIR 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1148 QMQSSFTSSEQELERLRRENKDIENLRRE-REHLEMELE-KAEMERS---TYVTEVRELK-------AQLNETLTKLRTE 1215
Cdd:PRK02224 596 TLLAAIADAEDEIERLREKREALAELNDErRERLAEKRErKRELEAEfdeARIEEAREDKeraeeylEQVEEKLDELREE 675
|
570
....*....|....*....
gi 383418275 1216 QNERQKVAGDLHKAQQSLE 1234
Cdd:PRK02224 676 RDDLQAEIGAVENELEELE 694
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
570-948 |
3.34e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.98 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 570 QVQDILEQNEALKAQIQQFHSQI-AAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQNMNFLLK 648
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIeNRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 649 AEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLleEQLQHEISNKMEEFK----ILNDQNKALKLEVQKLQTLVSEQ 724
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLSHSRI--PEIQAELSKLEEEVSrieaRLREIEQKLNRLTLEKEYLEKEI 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 725 PNKdvVEQMEKCIQEKDEKLKTVEELLetglIQVATKEEELNAIRTENSSLTKEVQDLKAKqndqvsfaslVEELKKVIH 804
Cdd:TIGR02169 836 QEL--QEQRIDLKEQIKSIEKEIENLN----GKKEELEEELEELEAALRDLESRLGDLKKE----------RDELEAQLR 899
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 805 EKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSITSQVQELQNLlkgkEEQMNTMKAV-- 882
Cdd:TIGR02169 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV----EEEIRALEPVnm 975
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 883 -----LEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQ--------------HNLKEV------SSASQFEE------- 930
Cdd:TIGR02169 976 laiqeYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKkkrevfmeafeainENFNEIfaelsgGTGELILEnpddpfa 1055
|
410 420
....*....|....*....|
gi 383418275 931 --LEIVLKEKENELKRVEAM 948
Cdd:TIGR02169 1056 ggLELSAKPKGKPVQRLEAM 1075
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
409-790 |
4.39e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 409 QQVREQMEAEIAHLKQENGILRDAVSNTTNQLEskqsaeLNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKV 488
Cdd:COG4717 94 QEELEELEEELEELEAELEELREELEKLEKLLQ------LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEE 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 489 QLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmESEQKRVNKEESLQ 568
Cdd:COG4717 168 LEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQL-ENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 569 MQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLAN-ERDHLTSKEEELKDIQNMNFLL 647
Cdd:COG4717 247 EARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEaEELQALPALEELEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 648 KAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIRLLEEQLQHEISN------------------KMEEFKILNDQNKA 709
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAllaeagvedeeelraaleQAEEYQELKEELEE 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 710 LKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTEN--SSLTKEVQDLKAKQN 787
Cdd:COG4717 407 LEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGelAELLQELEELKAELR 486
|
...
gi 383418275 788 DQV 790
Cdd:COG4717 487 ELA 489
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
431-641 |
4.52e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 431 DAVSNTTNQLESKQsAELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQSYIRKRtae 510
Cdd:COG3883 16 PQIQAKQKELSELQ-AELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGER--- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 511 heAAQQDLQSKFVAKENEVqsLHSKLTDTLVSKQQLeqrLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQfhs 590
Cdd:COG3883 92 --ARALYRSGGSVSYLDVL--LGSESFSDFLDRLSA---LSKIADADADLLEELKADKAELEAKKAELEAKLAELEA--- 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 383418275 591 qiaAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTSKEEELKDIQ 641
Cdd:COG3883 162 ---LKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1089-1242 |
5.12e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 5.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1089 LEHKLKEADEMHTLLQLECEKYKSVLAETEGILQKLQRsvEQEENKWKVKVDESHKTIKQMQSSFTSSEQELERLRREnk 1168
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARLEAAKTELEDLEK--EIKRLELEIEEVEARIKKYEEQLGNVRNNKEYEALQKE-- 97
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 383418275 1169 dIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQSKIVK 1242
Cdd:COG1579 98 -IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAA 170
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1001-1244 |
6.05e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 6.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1001 ISEREKEISGLWNELDSLKDAVEHQRKKNNERQQQVEAVELEAKEVLKKLfpkvsvpsnlsysewlhgfekkakecmagT 1080
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRI-----------------------------R 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1081 SGSEEVKVLEHKLKEADEMHTLLQLECEKYKSVLAEtegILQKLQRSVEQEENKWKVKVDESHKTIKQ---MQSSFTSSE 1157
Cdd:COG4942 73 ALEQELAALEAELAELEKEIAELRAELEAQKEELAE---LLRALYRLGRQPPLALLLSPEDFLDAVRRlqyLKYLAPARR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1158 QELERLRRENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKAQLNETLTKLRTEQNERQKVAGDLHKAQQSLELIQ 1237
Cdd:COG4942 150 EQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALI 229
|
....*..
gi 383418275 1238 SKIVKAA 1244
Cdd:COG4942 230 ARLEAEA 236
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
479-594 |
6.70e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 40.42 E-value: 6.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 479 AEQAVTQLKVQLQEAERRWEEVQSYI--RKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMES 556
Cdd:COG1566 81 LQAALAQAEAQLAAAEAQLARLEAELgaEAEIAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDAA 160
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 383418275 557 EQKRVNKEESLQMQVQDILEQNE--ALKAQIQQFHSQIAA 594
Cdd:COG1566 161 QAQLEAAQAQLAQAQAGLREEEElaAAQAQVAQAEAALAQ 200
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
554-859 |
7.41e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 40.61 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 554 MESEQKR-VNKEESLQMQVQDILEQNEALKAQIQQfHSQIAAQTSASVLAEELHKVIAEKDKQIKQTEDSLANERDHLTS 632
Cdd:PLN03229 413 VDPERKVnMKKREAVKTPVRELEGEVEKLKEQILK-AKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMGLQERLENL 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 633 KEEELK---DIQNMNFLLKAEVQKLQALANEQAAAAHELEKMQQSVYVKDDKIR---LLE-----EQLQHEISNKMEEFK 701
Cdd:PLN03229 492 REEFSKansQDQLMHPVLMEKIEKLKDEFNKRLSRAPNYLSLKYKLDMLNEFSRakaLSEkkskaEKLKAEINKKFKEVM 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 702 I---LNDQNKALKLEVQKLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELnAIRTENSSLTKE 778
Cdd:PLN03229 572 DrpeIKEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDT-AEQTPPPNLQEK 650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 779 VQDLKAKQNDQVSFASLVEELKKVIHEkdgkiKSVEELLEAELLKVANKEKtVQDLKQEIK----------ALKEEIGNV 848
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSKIEL-----LKLEVAKASKTPDVTEKEK-IEALEQQIKqkiaealnssELKEKFEEL 724
|
330
....*....|.
gi 383418275 849 QLEKAQQLSIT 859
Cdd:PLN03229 725 EAELAAARETA 735
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
269-526 |
7.68e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.87 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 269 KKLKTETDKENA-----EVKFKDFLLSLKTMMFSEDEAL-CVVDLLKEKSGVIQDAlkKSSKGELTTLVHQLQEKDKLLA 342
Cdd:pfam15921 607 QEFKILKDKKDAkirelEARVSDLELEKVKLVNAGSERLrAVKDIKQERDQLLNEV--KTSRNELNSLSEDYEVLKRNFR 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 343 AVKEDAAATKDRCKQLTQEMMSEKERSNVVIARMKDRIGTLEKEHNVFQNKIHVSYQETQQMQMKFQQVREQMeaeiAHL 422
Cdd:pfam15921 685 NKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAM----TNA 760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 423 KQENGILRDavsnttnqleskqsaELNKLRQDYARLVNELTEKTGKLQQEEVQKKNAEQAVTQLKVQLQEAERRWEEVQS 502
Cdd:pfam15921 761 NKEKHFLKE---------------EKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
250 260
....*....|....*....|....
gi 383418275 503 YIRKRtaEHEAAQQDLQSKFVAKE 526
Cdd:pfam15921 826 IIQRQ--EQESVRLKLQHTLDVKE 847
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
830-1037 |
8.05e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 40.67 E-value: 8.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 830 TVQDLKQEIKALKEEignvQLEKAQQLSITSQVQELQNLLKGKEEQmntmKAVLEEKEKDLANTGKWLQDLQEENESLKA 909
Cdd:PRK11281 37 TEADVQAQLDALNKQ----KLLEAEDKLVQQDLEQTLALLDKIDRQ----KEETEQLKQQLAQAPAKLRQAQAELEALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 910 HVQEVAQHNLKEVSSAsqfeELEIVLKEKENELKRVEAMLKERESDLSSKTKLLQDVQ---DENKLFKSQIE-QLKQQNY 985
Cdd:PRK11281 109 DNDEETRETLSTLSLR----QLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQaalYANSQRLQQIRnLLKGGKV 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 986 QQASSFPPHEELLKV--------ISEREKEISGlwNELdsLKDAVEHQRKKNNERQQQVE 1037
Cdd:PRK11281 185 GGKALRPSQRVLLQAeqallnaqNDLQRKSLEG--NTQ--LQDLLQKQRDYLTARIQRLE 240
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
874-1189 |
8.07e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.30 E-value: 8.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 874 EQMNTMKAVLEEKEKDlantgKWLQDLQEENEslkAHVQEvaqhnLKEVSSASQFEELE---IVLKEKENELKRVEAMLK 950
Cdd:PRK05771 4 VRMKKVLIVTLKSYKD-----EVLEALHELGV---VHIED-----LKEELSNERLRKLRsllTKLSEALDKLRSYLPKLN 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 951 eresdLSSKTKLLQDVQDENKLFKSQIEQLkqqnyqqassfpphEELLKVISEREKEISGLWNELDSLKDavehqrkknn 1030
Cdd:PRK05771 71 -----PLREEKKKVSVKSLEELIKDVEEEL--------------EKIEKEIKELEEEISELENEIKELEQ---------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1031 erqqqveavELEAKEVLKKLfpkvSVP-SNLSYSEWLHGFEKKAKECMAGTSGSEEVKVLEHKLKEADEMHTLLQLeceK 1109
Cdd:PRK05771 122 ---------EIERLEPWGNF----DLDlSLLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYVVVV---V 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 1110 YKSVLAETEGILQKLqrSVEQEENKWKVKVDESHKTIKQMQSSFtssEQELERLRRE-----NKDIENLRREREHLEMEL 1184
Cdd:PRK05771 186 LKELSDEVEEELKKL--GFERLELEEEGTPSELIREIKEELEEI---EKERESLLEElkelaKKYLEELLALYEYLEIEL 260
|
....*
gi 383418275 1185 EKAEM 1189
Cdd:PRK05771 261 ERAEA 265
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
404-639 |
9.21e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.38 E-value: 9.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 404 MQMKFQQVREQME--AEIAHLKQENGILRDAVSNTTNQLESkQSAELNKLRQD---YARLVNELTEKTGKLQQEEVQK-- 476
Cdd:PHA02562 145 MQLSAPARRKLVEdlLDISVLSEMDKLNKDKIRELNQQIQT-LDMKIDHIQQQiktYNKNIEEQRKKNGENIARKQNKyd 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 477 ------KNAEQAVTQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQS-----KFVAKENE----VQSLH------SK 535
Cdd:PHA02562 224 elveeaKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQfqkviKMYEKGGVcptcTQQISegpdriTK 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 383418275 536 LTDTLVSKQQLEQRLMQLMESEQKRVNKEESLQMQVQDILEQNEALKAQIQQFHSQIA--------AQTSASVLAEELHK 607
Cdd:PHA02562 304 IKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKkvkaaieeLQAEFVDNAEELAK 383
|
250 260 270
....*....|....*....|....*....|..
gi 383418275 608 VIAEKDKqIKQTEDSLANERDHLTSKEEELKD 639
Cdd:PHA02562 384 LQDELDK-IVKTKSELVKEKYHRGIVTDLLKD 414
|
|
|