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Conserved domains on  [gi|332658794|gb|AEE84194|]
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disease resistance protein (TIR-NBS-LRR class) family [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 6-885 1.61e-117

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 401.18  E-value: 1.61e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210   14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210   92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210  171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210  247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210  324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210  404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210  484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210  557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210  637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210  717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210  776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                         890       900       910       920       930       940
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 332658794  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210  843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1562 2.49e-47

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


:

Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 167.16  E-value: 2.49e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIagECSLNWASDADMIEKVANDIR 1556
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDIS 159


                   ....*.
gi 332658794  1557 KKLISS 1562
Cdd:pfam01582  160 NKLNGT 165
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1080 1.34e-16

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 84.21  E-value: 1.34e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886    22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLalldtldlKN-------CNRLRHLPMEMHNLNPLKVLDLSNC 950
Cdd:COG4886   102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANL--------TNlkeldlsNNQLTDLPEPLGNLTNLKSLDLSNN 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  951 sELEVFTSSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSI 1030
Cdd:COG4886   170 -QLTDLPEELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 332658794 1031 KDFSKLLSLRLRYCeNLRSLPQLPR--SLQLLNAHGCsslQLIT-PDFKQLPR 1080
Cdd:COG4886   225 ANLTNLETLDLSNN-QLTDLPELGNltNLEELDLSNN---QLTDlPPLANLTN 273
PLN03210 super family cl33662
Resistant to P. syringae 6; Provisional
 1294-1380 3.08e-08

Resistant to P. syringae 6; Provisional


The actual alignment was detected with superfamily member PLN03210:

Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210  418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                  ....*...
gi 332658794 1373 FSREIIHM 1380
Cdd:PLN03210  497 MGKEIVRA 504
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 6-885 1.61e-117

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 401.18  E-value: 1.61e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210   14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210   92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210  171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210  247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210  324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210  404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210  484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210  557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210  637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210  717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210  776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                         890       900       910       920       930       940
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 332658794  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210  843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1562 2.49e-47

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 167.16  E-value: 2.49e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIagECSLNWASDADMIEKVANDIR 1556
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDIS 159


                   ....*.
gi 332658794  1557 KKLISS 1562
Cdd:pfam01582  160 NKLNGT 165
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1391-1562 5.99e-47

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 185.08  E-value: 5.99e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1391 MASGSPCNRN--NDVFVSFHGKDFRKQFISDFLKKLVYKGIrICIGDKILSRS-----LINKVIKESSIAVVVFSENYAS 1463
Cdd:PLN03210    1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLI-IAFKDNEIERSqsldpELKQAIRDSRIAVVVFSKNYAS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1464 SSLCLLQLMEIMKCWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECSLNWAS 1543
Cdd:PLN03210   80 SSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPN 159

                         170
                  ....*....|....*....
gi 332658794 1544 DADMIEKVANDIRKKLISS 1562
Cdd:PLN03210  160 EAKMIEEIANDVLGKLNLT 178
TIR smart00255
Toll - interleukin 1 - resistance;
1402-1533 4.74e-37

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 136.68  E-value: 4.74e-37
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   1402 DVFVSFHGK-DFRKQFISDFLKKLVYKGIRICIGDKILSRSL---INKVIKESSIAVVVFSENYASSSLCLLQLMEIMKC 1477
Cdd:smart00255    3 DVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDleeIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALEN 82

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 332658794   1478 WEELGQ-VVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDE-RQRWSRALTDAASI 1533
Cdd:smart00255   83 ALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 7-163 6.20e-27

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 108.61  E-value: 6.20e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794     7 VYISFnRWEDTiRHSFVSHLSAEFQRKGVSVFASE-DSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:pfam01582    3 VFLSF-RGSDT-REWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794    86 KCRRSKGLVVVPVFYGLTNSIV-----------KKHCLELKKmypdDKVDEWRNALWDIADLRgghVSSHKRSDSELVEK 154
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVrkqtgsfgkafKKHKKVLTE----EKVLKWRGALNEVANIW---HSKSVSDESKFWKK 153


                   ....*....
gi 332658794   155 IVADVRQKL 163
Cdd:pfam01582  154 IAYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
6-136 4.19e-19

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 85.45  E-value: 4.19e-19
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794      6 EVYISFNRWEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDdRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:smart00255    3 DVFISYSGKED-VRNEFLSHLLEKLRGYGLCVFIDDFEPGG-GDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 332658794     86 KCRRSKG-LVVVPVFYGLTNS-----------IVKKHCLELKKmypDDKVDEWRNALWDIADL 136
Cdd:smart00255   81 ENALEEGgLRVIPIFYEVIPSdvrkqpgkfrkVFKKNYLKWPE---DEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1080 1.34e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 84.21  E-value: 1.34e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886    22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLalldtldlKN-------CNRLRHLPMEMHNLNPLKVLDLSNC 950
Cdd:COG4886   102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANL--------TNlkeldlsNNQLTDLPEPLGNLTNLKSLDLSNN 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  951 sELEVFTSSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSI 1030
Cdd:COG4886   170 -QLTDLPEELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 332658794 1031 KDFSKLLSLRLRYCeNLRSLPQLPR--SLQLLNAHGCsslQLIT-PDFKQLPR 1080
Cdd:COG4886   225 ANLTNLETLDLSNN-QLTDLPELGNltNLEELDLSNN---QLTDlPPLANLTN 273
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
620-912 4.54e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.59  E-value: 4.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  620 DELQYSPNIEKIDLKGCLELQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLTr 699
Cdd:COG4886    18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLT- 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  700 KLENVSSSNQDHRKQVLKLK----DSSHLGSLPD-IVIFESLEVLDFSGC--SEL-EDIQGFPqNLKRLYLAKTAIKEVP 771
Cdd:COG4886    97 NLTELDLSGNEELSNLTNLEsldlSGNQLTDLPEeLANLTNLKELDLSNNqlTDLpEPLGNLT-NLKSLDLSNNQLTDLP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  772 SSLChHISKLVKLDMENCeRLRDLPMGMSNMKYLAVLKLSGCsnleNIKELP------RNLKELYLAGTAVKEFPStlLE 845
Cdd:COG4886   176 EELG-NLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGN----QLTDLPeplanlTNLETLDLSNNQLTDLPE--LG 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 332658794  846 TLSEVVLLDLENCkKLQGLPT--GMSKLEFLVM-------LKLSGCSKLEIIVDLPLNLIELYLAGTAIRELPPSI 912
Cdd:COG4886   248 NLTNLEELDLSNN-QLTDLPPlaNLTNLKTLDLsnnqltdLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1294-1380 3.08e-08

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210  418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                  ....*...
gi 332658794 1373 FSREIIHM 1380
Cdd:PLN03210  497 MGKEIVRA 504
 
Name Accession Description Interval E-value
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 6-885 1.61e-117

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 401.18  E-value: 1.61e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794    6 EVYISFNRwEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:PLN03210   14 DVFPSFSG-ED-VRITFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKQAIRDSRIAVVVFSKNYASSSWCLNELLEIV 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   86 KCRRSKGLVVVPVFYGLTNSIVKKHCLELKKMY-------PDDKVDEWRNALWDIADLRGGHvSSHKRSDSELVEKIVAD 158
Cdd:PLN03210   92 RCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFektcqnkTEDEKIQWKQALTDVANILGYH-SQNWPNEAKMIEEIAND 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  159 VRQKL------DRRGRIGVYSRLTKIEYLLCKQPGcIIRSLGIWGMAGIGKTTLARAAYDQLSRDFEASCFIedfDREF- 231
Cdd:PLN03210  171 VLGKLnltpsnDFEDFVGIEDHIAKMSSLLHLESE-EVRMVGIWGSSGIGKTTIARALFSRLSRQFQSSVFI---DRAFi 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  232 ---------------------QEKGFFGLLEKQlgvNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGP 290
Cdd:PLN03210  247 sksmeiyssanpddynmklhlQRAFLSEILDKK---DIKIYHLGAMEERLKHRKVLIFIDDLDDQDVLDALAGQTQWFGS 323

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  291 GSLIIVTSQDKQVLVQCQVNEIYKVQGLNKHESLQLFSRCAFGKDVPDQNLLELSMKFVDYANGNPLALSICGKNLKGKT 370
Cdd:PLN03210  324 GSRIIVITKDKHFLRAHGIDHIYEVCLPSNELALEMFCRSAFKKNSPPDGFMELASEVALRAGNLPLGLNVLGSYLRGRD 403

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  371 PLDMKSVVLELKRHLSDKIFVKLKSSYDALS-VSEKEIFLDIVFTFRGANVDNVMQSLAGCGFFPRVGIEALVDKSFVTV 449
Cdd:PLN03210  404 KEDWMDMLPRLRNGLDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHV 483

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  450 SENRVQVNNLIYDVGLKIINDQSDEIGMCYRFVDASNSQSLIEHKeireseQGYEDVKAINLDTSNLPfKGHI---AFQH 526
Cdd:PLN03210  484 REDIVEMHSLLQEMGKEIVRAQSNEPGEREFLVDAKDICDVLEDN------TGTKKVLGITLDIDEID-ELHIhenAFKG 556

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  527 MYNLRYLTIYS-SINPTKDPDLFLPGDPQFLPPELRLLHWTCYPLHSFPQNFGFQYLVELNMPCSKLKKLWGGTKNLEVL 605
Cdd:PLN03210  557 MRNLLFLKFYTkKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGL 636

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  606 KRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELQSFPDTGQ------------------------LQHLRIVDLSTCKK 661
Cdd:PLN03210  637 RNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQylnkledldmsrcenleilptginLKSLYRLNLSGCSR 716

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  662 IKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLtrKLENVSSSNQDHRKQVLKlkdsshlgslPDIVIfeslevldf 741
Cdd:PLN03210  717 LKSFPDISTNISWLDLDETAIEEFPSNLRLENLDEL--ILCEMKSEKLWERVQPLT----------PLMTM--------- 775

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  742 sgcselediqgFPQNLKRLYLAKT-AIKEVPSSLcHHISKLVKLDMENCERLRDLPMGMsNMKYLAVLKLSGCSNLENIK 820
Cdd:PLN03210  776 -----------LSPSLTRLFLSDIpSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFP 842

                         890       900       910       920       930       940
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 332658794  821 ELPRNLKELYLAGTAVKEFPsTLLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVMLKLSGCSKL 885
Cdd:PLN03210  843 DISTNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGAL 906
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 1402-1562 2.49e-47

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 167.16  E-value: 2.49e-47
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1402 DVFVSFHGKDFRKQFISDFLKKLVYKGIRICIGDKILSRS-----LINKVIKESSIAVVVFSENYASSSLCLLQLMEIMK 1476
Cdd:pfam01582    2 DVFLSFRGSDTREWFVSHLLKELKQKGIKLFIDDRDLEPGeaiapELLSAIEKSRRSVVVLSPNYASSGWCLDELVKILE 81

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1477 CWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIagECSLNWASDADMIEKVANDIR 1556
Cdd:pfam01582   82 CALDLGQKVIPIFYEVDPSDVRKQTGSFGKAFKKHKKVLTEEKVLKWRGALNEVANI--WHSKSVSDESKFWKKIAYDIS 159


                   ....*.
gi 332658794  1557 KKLISS 1562
Cdd:pfam01582  160 NKLNGT 165
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1391-1562 5.99e-47

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 185.08  E-value: 5.99e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1391 MASGSPCNRN--NDVFVSFHGKDFRKQFISDFLKKLVYKGIrICIGDKILSRS-----LINKVIKESSIAVVVFSENYAS 1463
Cdd:PLN03210    1 MASSSSSSRNwvYDVFPSFSGEDVRITFLSHFLKELDRKLI-IAFKDNEIERSqsldpELKQAIRDSRIAVVVFSKNYAS 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1464 SSLCLLQLMEIMKCWEELGQVVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDERQRWSRALTDAASIAGECSLNWAS 1543
Cdd:PLN03210   80 SSWCLNELLEIVRCKEELGQLVIPVFYGLDPSHVRKQTGDFGEAFEKTCQNKTEDEKIQWKQALTDVANILGYHSQNWPN 159

                         170
                  ....*....|....*....
gi 332658794 1544 DADMIEKVANDIRKKLISS 1562
Cdd:PLN03210  160 EAKMIEEIANDVLGKLNLT 178
TIR smart00255
Toll - interleukin 1 - resistance;
1402-1533 4.74e-37

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 136.68  E-value: 4.74e-37
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   1402 DVFVSFHGK-DFRKQFISDFLKKLVYKGIRICIGDKILSRSL---INKVIKESSIAVVVFSENYASSSLCLLQLMEIMKC 1477
Cdd:smart00255    3 DVFISYSGKeDVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDleeIDEAIEKSRIAIVVLSPNYAESEWCLDELVAALEN 82

                            90       100       110       120       130
                    ....*....|....*....|....*....|....*....|....*....|....*...
gi 332658794   1478 WEELGQ-VVMPIFYKVNPSDIRNQSGHFGKGFKKTCKKTINDE-RQRWSRALTDAASI 1533
Cdd:smart00255   83 ALEEGGlRVIPIFYEVIPSDVRKQPGKFRKVFKKNYLKWPEDEkEQFWKKALYAVPSK 140
TIR pfam01582
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ...
 7-163 6.20e-27

TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.


Pssm-ID: 396246 [Multi-domain]  Cd Length: 165  Bit Score: 108.61  E-value: 6.20e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794     7 VYISFnRWEDTiRHSFVSHLSAEFQRKGVSVFASE-DSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:pfam01582    3 VFLSF-RGSDT-REWFVSHLLKELKQKGIKLFIDDrDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELVKIL 80

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794    86 KCRRSKGLVVVPVFYGLTNSIV-----------KKHCLELKKmypdDKVDEWRNALWDIADLRgghVSSHKRSDSELVEK 154
Cdd:pfam01582   81 ECALDLGQKVIPIFYEVDPSDVrkqtgsfgkafKKHKKVLTE----EKVLKWRGALNEVANIW---HSKSVSDESKFWKK 153


                   ....*....
gi 332658794   155 IVADVRQKL 163
Cdd:pfam01582  154 IAYDISNKL 162
TIR smart00255
Toll - interleukin 1 - resistance;
6-136 4.19e-19

Toll - interleukin 1 - resistance;


Pssm-ID: 214587 [Multi-domain]  Cd Length: 140  Bit Score: 85.45  E-value: 4.19e-19
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794      6 EVYISFNRWEDtIRHSFVSHLSAEFQRKGVSVFASEDSASDdRFAEESDAAIAKARVSVVIFSENFASSKGCLNEFLKVS 85
Cdd:smart00255    3 DVFISYSGKED-VRNEFLSHLLEKLRGYGLCVFIDDFEPGG-GDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVAAL 80

                            90       100       110       120       130       140
                    ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 332658794     86 KCRRSKG-LVVVPVFYGLTNS-----------IVKKHCLELKKmypDDKVDEWRNALWDIADL 136
Cdd:smart00255   81 ENALEEGgLRVIPIFYEVIPSdvrkqpgkfrkVFKKNYLKWPE---DEKEQFWKKALYAVPSK 140
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
799-1080 1.34e-16

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 84.21  E-value: 1.34e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  799 MSNMKYLAVLKLSGCSNLENIKELPRNLKELYLAGTAVKEFPST-LLETLSEVVLLDLENCKKLQGLPTGMSKLEFLVML 877
Cdd:COG4886    22 TTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLlLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTEL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  878 KLSGCSKLEIIVdlplNLIELYLAGTAIRELPPSIGDLalldtldlKN-------CNRLRHLPMEMHNLNPLKVLDLSNC 950
Cdd:COG4886   102 DLSGNEELSNLT----NLESLDLSGNQLTDLPEELANL--------TNlkeldlsNNQLTDLPEPLGNLTNLKSLDLSNN 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  951 sELEVFTSSLPKVRELRpaptvmllrsklpfcffifyehrvTLSLYKARLQYIPEEIRWMPSLKTLDLSRNGFTEVPVSI 1030
Cdd:COG4886   170 -QLTDLPEELGNLTNLK------------------------ELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL 224

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 332658794 1031 KDFSKLLSLRLRYCeNLRSLPQLPR--SLQLLNAHGCsslQLIT-PDFKQLPR 1080
Cdd:COG4886   225 ANLTNLETLDLSNN-QLTDLPELGNltNLEELDLSNN---QLTDlPPLANLTN 273
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
620-912 4.54e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.59  E-value: 4.54e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  620 DELQYSPNIEKIDLKGCLELQSFPDTGQLQHLRIVDLSTCKKIKSFPKVPPSIRKLHLQGTGIRDLSSLNHSSESQRLTr 699
Cdd:COG4886    18 LELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLT- 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  700 KLENVSSSNQDHRKQVLKLK----DSSHLGSLPD-IVIFESLEVLDFSGC--SEL-EDIQGFPqNLKRLYLAKTAIKEVP 771
Cdd:COG4886    97 NLTELDLSGNEELSNLTNLEsldlSGNQLTDLPEeLANLTNLKELDLSNNqlTDLpEPLGNLT-NLKSLDLSNNQLTDLP 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  772 SSLChHISKLVKLDMENCeRLRDLPMGMSNMKYLAVLKLSGCsnleNIKELP------RNLKELYLAGTAVKEFPStlLE 845
Cdd:COG4886   176 EELG-NLTNLKELDLSNN-QITDLPEPLGNLTNLEELDLSGN----QLTDLPeplanlTNLETLDLSNNQLTDLPE--LG 247

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 332658794  846 TLSEVVLLDLENCkKLQGLPT--GMSKLEFLVM-------LKLSGCSKLEIIVDLPLNLIELYLAGTAIRELPPSI 912
Cdd:COG4886   248 NLTNLEELDLSNN-QLTDLPPlaNLTNLKTLDLsnnqltdLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
590-857 7.09e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 78.82  E-value: 7.09e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  590 SKLKKLWGGTKNLEVLKRITLSCSVQLLNVDELQYSPNIEKIDLKGCLELqsfpdtGQLQHLRIVDLSTCKkIKSFPKV- 668
Cdd:COG4886    60 LLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSGNQ-LTDLPEEl 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  669 --PPSIRKLHLQGTGIRDL-SSLnhssesQRLTrKLENVS-SSNQdhrkqvlkLKD-SSHLGSLPdivifeSLEVLDFSG 743
Cdd:COG4886   133 anLTNLKELDLSNNQLTDLpEPL------GNLT-NLKSLDlSNNQ--------LTDlPEELGNLT------NLKELDLSN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  744 CsELEDIQ---GFPQNLKRLYLAKTAIKEVPSSLcHHISKLVKLDMENCeRLRDLPmGMSNMKYLAVLKLSGC--SNLEN 818
Cdd:COG4886   192 N-QITDLPeplGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNN-QLTDLP-ELGNLTNLEELDLSNNqlTDLPP 267

                         250       260       270
                  ....*....|....*....|....*....|....*....
gi 332658794  819 IKELPrNLKELYLAGTAVKEFPSTLLETLSEVVLLDLEN 857
Cdd:COG4886   268 LANLT-NLKTLDLSNNQLTDLKLKELELLLGLNSLLLLL 305
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
716-1062 1.02e-14

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 78.44  E-value: 1.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  716 LKLKDSSHLGSLPDIVIFESLEVLDFSGCSELEDIQGFPQNLKRLYLAKTAIKEVPSSLCHHISKLV-KLDMENCERLRD 794
Cdd:COG4886     8 LTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLlLLSLLLLSLLLL 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  795 LPMGMSNMKYLAVLKLSGCSNLENIKelprNLKELYLAGTAVKEFPSTLlETLSEVVLLDLENCKkLQGLPTGMSKLEFL 874
Cdd:COG4886    88 GLTDLGDLTNLTELDLSGNEELSNLT----NLESLDLSGNQLTDLPEEL-ANLTNLKELDLSNNQ-LTDLPEPLGNLTNL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  875 VMLKLSGCSkleiIVDLPL------NLIELYLAGTAIRELPPSIGDLalldtldlKN-------CNRLRHLPMEMHNLNP 941
Cdd:COG4886   162 KSLDLSNNQ----LTDLPEelgnltNLKELDLSNNQITDLPEPLGNL--------TNleeldlsGNQLTDLPEPLANLTN 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  942 LKVLDLSNCsELevftSSLPKVRELrpaptvmllrSKLpfcffifyehrVTLSLYKARLQYIPEEIRwMPSLKTLDLSRN 1021
Cdd:COG4886   230 LETLDLSNN-QL----TDLPELGNL----------TNL-----------EELDLSNNQLTDLPPLAN-LTNLKTLDLSNN 282

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 332658794 1022 GFTEVPVSIKDFSKLLSLRLRYCENLRSLPQLPRSLQLLNA 1062
Cdd:COG4886   283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTL 323
NB-ARC pfam00931
NB-ARC domain;
152-403 1.04e-11

NB-ARC domain;


Pssm-ID: 395745 [Multi-domain]  Cd Length: 245  Bit Score: 67.02  E-value: 1.04e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   152 VEKIVADVRQKLDRRGRIGVysrltkieyllckqpgciirsLGIWGMAGIGKTTLARAAY---DQLSRDFE--ASCFI-- 224
Cdd:pfam00931    1 REDMVEKVIGKLSEKDEPGI---------------------VGIHGMGGVGKTTLAAQIFndfDEVEGHFDsvAWVVVsk 59

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   225 -----EDFDREFQEkgfFGLLEKQLGVNPQVTRLSILLKTLRSKRILLVLDDVRKPLGATSFLCEFDWLGPGSLIIVTSQ 299
Cdd:pfam00931   60 tftisTLQQTILQN---LGLSEDDWDNKEEGELARKIRRALLTKRFLLVLDDVWDEEDWDKIGIPLPDRENGCRVLLTTR 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794   300 DKQVL--VQCQvNEIYKVQGLNKHESLQLFSRCAFGKDV-PDQNLLELSMKFVDYANGNPLALSICGKNLKGK-TPLDMK 375
Cdd:pfam00931  137 SEEVAgrVGGP-SDPHEVELLEPDEAWELFENKVFPKTLgECELLEDVAKEIVEKCRGLPLALKVLGGLLSCKkTVEEWK 215

                          250       260
                   ....*....|....*....|....*....
gi 332658794   376 SVVLELKRHLsdKIFVK-LKSSYDALSVS 403
Cdd:pfam00931  216 HVYDVLQSEL--KSNSYsLNSVRSILQLS 242
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 7-100 1.57e-08

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 54.24  E-value: 1.57e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794     7 VYISFNrWEDtirHSFVSHLSAEFQRKGVSVFA-SEDSASDDRFAEESDAAIAKARVSVVIFSENFASSKGCLNEfLKVS 85
Cdd:pfam13676    1 VFISYA-GED---RAWAEWLADALEAAGYRVWLdRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAE-WEAA 75

                           90
                   ....*....|....*
gi 332658794    86 KCRRSKGLVVVPVFY 100
Cdd:pfam13676   76 LADPEGRKRLIPVRL 90
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 1294-1380 3.08e-08

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 58.73  E-value: 3.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1294 LDGKGKKRLRVNYAGLK-QREKALFLYIACLLGGEKADLLAQFLASTDFVIESTLEDLAGRYLIDISSNgEVMMPPLQRN 1372
Cdd:PLN03210  418 LDGKIEKTLRVSYDGLNnKKDKAIFRHIACLFNGEKVNDIKLLLANSDLDVNIGLKNLVDKSLIHVRED-IVEMHSLLQE 496


                  ....*...
gi 332658794 1373 FSREIIHM 1380
Cdd:PLN03210  497 MGKEIVRA 504
PLN03194 PLN03194
putative disease resistance protein; Provisional
 1369-1535 6.09e-08

putative disease resistance protein; Provisional


Pssm-ID: 215626 [Multi-domain]  Cd Length: 187  Bit Score: 54.44  E-value: 6.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1369 LQRNFSREIIHMLPASTkelvsmasgsPCnrnnDVFVSFHGKDFRKQFISDFLKKLVYKGIRICI-------GDKILSRs 1441
Cdd:PLN03194    9 LNNRLFLHYPSSSSSAK----------PC----DVFINHRGIDTKRTIATLLYDHLSRLNLRPFLdnknmkpGDKLFDK- 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794 1442 lINKVIKESSIAVVVFSENYASSSLCLLQLMEIMkcweELGQVVMPIFYKVNPSDIRNQSghfgkgfKKTCKktiNDERQ 1521
Cdd:PLN03194   74 -INSAIRNCKVGVAVFSPRYCESYFCLHELALIM----ESKKRVIPIFCDVKPSQLRVVD-------NGTCP---DEEIR 138

                         170
                  ....*....|....
gi 332658794 1522 RWSRALTDAASIAG 1535
Cdd:PLN03194  139 RFNWALEEAKYTVG 152
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
577-769 6.67e-08

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 56.87  E-value: 6.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  577 FGFQYLVELNMPCSKLKKLWGGTKNLEVLKRITLS-CSVQLLNvDELQYSPNIEKIDLKGClELQSFPDT-GQLQHLRIV 654
Cdd:COG4886   110 SNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSnNQLTDLP-EPLGNLTNLKSLDLSNN-QLTDLPEElGNLTNLKEL 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  655 DLSTCkKIKSFPKV---PPSIRKLHLQGTGIRDLS-SLnhssesQRLTrKLENVS-SSNQdhrkqvlklkdsshLGSLPD 729
Cdd:COG4886   188 DLSNN-QITDLPEPlgnLTNLEELDLSGNQLTDLPePL------ANLT-NLETLDlSNNQ--------------LTDLPE 245

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 332658794  730 IVIFESLEVLDFSGCsELEDI--QGFPQNLKRLYLAKTAIKE 769
Cdd:COG4886   246 LGNLTNLEELDLSNN-QLTDLppLANLTNLKTLDLSNNQLTD 286
LRR_3 pfam07725
Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the ...
 581-600 4.17e-06

Leucine Rich Repeat; This Pfam entry includes some LRRs that fail to be detected by the pfam00560 model.


Pssm-ID: 429621 [Multi-domain]  Cd Length: 20  Bit Score: 44.64  E-value: 4.17e-06
                           10        20
                   ....*....|....*....|
gi 332658794   581 YLVELNMPCSKLKKLWGGTK 600
Cdd:pfam07725    1 NLVELNMPYSKLEKLWEGVK 20
TIR_2 pfam13676
TIR domain; This is a family of Toll-like receptors.
 1403-1496 8.32e-06

TIR domain; This is a family of Toll-like receptors.


Pssm-ID: 463954 [Multi-domain]  Cd Length: 118  Bit Score: 46.54  E-value: 8.32e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  1403 VFVSFHGKDfrKQFISDFLKKLVYKGIR-------ICIGDKILSRslINKVIKESSIAVVVFSENYASSSLCLLQLMEIM 1475
Cdd:pfam13676    1 VFISYAGED--RAWAEWLADALEAAGYRvwldrwdIRPGDDWVEE--IEEAIENSDRVLVVLSPNYLESPWCRAEWEAAL 76

                           90       100
                   ....*....|....*....|.
gi 332658794  1476 KCwEELGQVVMPIFYKVNPSD 1496
Cdd:pfam13676   77 AD-PEGRKRLIPVRLECDLEL 96
NACHT COG5635
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
195-498 5.30e-05

Predicted NTPase, NACHT family domain [Signal transduction mechanisms];


Pssm-ID: 444362 [Multi-domain]  Cd Length: 935  Bit Score: 48.26  E-value: 5.30e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  195 IWGMAGIGKTTLARAAYDQLSRDFEASC-----FIE--DFDREFQekgFFGLLEKQLGVNPQVTRlSILLKTLRSKRILL 267
Cdd:COG5635   185 ILGEPGSGKTTLLRYLALELAERYLDAEdpipiLIElrDLAEEAS---LEDLLAEALEKRGGEPE-DALERLLRNGRLLL 260

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  268 VLD------------DVRKPLGAtsFLCEFdwlgPGSLIIVTS----QDKQVLVQCQVneiYKVQGLNKHESLQLFSRC- 330
Cdd:COG5635   261 LLDgldevpdeadrdEVLNQLRR--FLERY----PKARVIITSrpegYDSSELEGFEV---LELAPLSDEQIEEFLKKWf 331

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  331 --------AFGKDVPD-QNLLELSmkfvdyanGNPLALSICGKNLKGKTPL-DMKSVVLE--LKRHLSDKIFVKLKSSYD 398
Cdd:COG5635   332 eaterkaeRLLEALEEnPELRELA--------RNPLLLTLLALLLRERGELpDTRAELYEqfVELLLERWDEQRGLTIYR 403

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  399 ALSVSEKEIFL-DIVFtfrganvdnVMQSlAGCGFFPRVGIEALVDKSFVTVSENRVQVNNLIYDVGLkiINDQSDEIgm 477
Cdd:COG5635   404 ELSREELRELLsELAL---------AMQE-NGRTEFAREELEEILREYLGRRKDAEALLDELLLRTGL--LVERGEGR-- 469

                         330       340
                  ....*....|....*....|.
gi 332658794  478 cYRFVdasnsqslieHKEIRE 498
Cdd:COG5635   470 -YSFA----------HRSFQE 479
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 558-826 3.97e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 42.14  E-value: 3.97e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  558 PELRLLHWTCYPLHSFPQNFGFQYLVEL-NMPCSKLKKLW------------GGTKNLEVLKRITLSCSVQLlnVDELQY 624
Cdd:PLN00113  301 PELVIQLQNLEILHLFSNNFTGKIPVALtSLPRLQVLQLWsnkfsgeipknlGKHNNLTVLDLSTNNLTGEI--PEGLCS 378

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  625 SPNIEKIDL-KGCLELQSFPDTGQLQHLRIVDLSTckkiKSFP-KVPPSIRKLHLqgTGIRDLSSLNHSSESQrlTRKLE 702
Cdd:PLN00113  379 SGNLFKLILfSNSLEGEIPKSLGACRSLRRVRLQD----NSFSgELPSEFTKLPL--VYFLDISNNNLQGRIN--SRKWD 450

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332658794  703 NVSSsnqdhrkQVLKLKDSSHLGSLPDIVIFESLEVLD-----FSGCSELEdIQGFPQnLKRLYLAKTAIK-EVPSSLCh 776
Cdd:PLN00113  451 MPSL-------QMLSLARNKFFGGLPDSFGSKRLENLDlsrnqFSGAVPRK-LGSLSE-LMQLKLSENKLSgEIPDELS- 520

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 332658794  777 HISKLVKLDMENCERLRDLPMGMSNMKYLAVLKLSgCSNLENikELPRNL 826
Cdd:PLN00113  521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLS-QNQLSG--EIPKNL 567
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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