hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
ADF_gelsolin super family | cl15697 | Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization ... |
114-158 | 1.69e-03 | ||
Actin depolymerization factor/cofilin- and gelsolin-like domains; Actin depolymerization factor/cofilin-like domains are present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. The actual alignment was detected with superfamily member cd11284: Pssm-ID: 472830 Cd Length: 132 Bit Score: 38.75 E-value: 1.69e-03
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Name | Accession | Description | Interval | E-value | ||
ADF_Twf-C_like | cd11284 | C-terminal ADF domain of twinfilin and related proteins; Actin depolymerization factor ... |
114-158 | 1.69e-03 | ||
C-terminal ADF domain of twinfilin and related proteins; Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Twinfilin contains two ADF domains, and inhibits the assembly of actin filaments by strongly interacting with monomeric ADP-actin (ADP-G-actin) in a 1:1 stochiometry (with it's C-terminal ADF domain, Twf-C) and inhibiting the actin monomer's nucleotide exchange. Mammalian twinfilin may also cap the barbed ends of F-actin filaments and prevent further assembly (or disassembly), in a process which requires both ADF domains. The N-terminal ADF domain (Twf-N) binds G-actin with a lower affinity than Twf-C; Twf-C can also bind F-actin. During capping, Twf-N may interact with the terminal actin subunit, and Twf-C may bind between two adjacent subunits at the side of the filament. Pssm-ID: 200440 Cd Length: 132 Bit Score: 38.75 E-value: 1.69e-03
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Name | Accession | Description | Interval | E-value | ||
ADF_Twf-C_like | cd11284 | C-terminal ADF domain of twinfilin and related proteins; Actin depolymerization factor ... |
114-158 | 1.69e-03 | ||
C-terminal ADF domain of twinfilin and related proteins; Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Twinfilin contains two ADF domains, and inhibits the assembly of actin filaments by strongly interacting with monomeric ADP-actin (ADP-G-actin) in a 1:1 stochiometry (with it's C-terminal ADF domain, Twf-C) and inhibiting the actin monomer's nucleotide exchange. Mammalian twinfilin may also cap the barbed ends of F-actin filaments and prevent further assembly (or disassembly), in a process which requires both ADF domains. The N-terminal ADF domain (Twf-N) binds G-actin with a lower affinity than Twf-C; Twf-C can also bind F-actin. During capping, Twf-N may interact with the terminal actin subunit, and Twf-C may bind between two adjacent subunits at the side of the filament. Pssm-ID: 200440 Cd Length: 132 Bit Score: 38.75 E-value: 1.69e-03
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Blast search parameters | ||||
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