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Conserved domains on  [gi|332643439|gb|AEE76960|]
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receptor like protein 39 [Arabidopsis thaliana]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 1000136)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00113 super family cl33413
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


The actual alignment was detected with superfamily member PLN00113:

Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113  21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113  95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113 174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113 238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113 306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113 365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113 445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                        650       660       670
                 ....*....|....*....|....*....|....
gi 332643439 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113 576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN03150 super family cl31977
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PLN03150:

Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150 430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113  21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113  95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113 174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113 238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113 306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113 365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113 445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                        650       660       670
                 ....*....|....*....|....*....|....
gi 332643439 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113 576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
80-409 2.15e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 106.94  E-value: 2.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  80 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 159
Cdd:COG4886   94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 160 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 239
Cdd:COG4886  171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 240 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 319
Cdd:COG4886  244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 320 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 399
Cdd:COG4886  323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                        330
                 ....*....|
gi 332643439 400 KHCNISVFPN 409
Cdd:COG4886  403 LTLALLDAVN 412
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 97-282 8.32e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 8.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  97 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 176
Cdd:cd21340   22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 177 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 229
Cdd:cd21340   74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 332643439 230 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 282
Cdd:cd21340  150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PLN03150 PLN03150
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150 430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
LRR_8 pfam13855
Leucine rich repeat;
171-234 2.14e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.82  E-value: 2.14e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 332643439  171 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 234
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 150-812 2.00e-62

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 228.19  E-value: 2.00e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 150 LSALLLHHNELTGSLSFVRN----LRKLTILDVSHN--HFSGTLNPNSSlfelhNLAYLDLGSNNFTSSSLPYEFGnLNK 223
Cdd:PLN00113  21 LNFSMLHAEELELLLSFKSSindpLKYLSNWNSSADvcLWQGITCNNSS-----RVVSIDLSGKNISGKISSAIFR-LPY 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 224 LELLDVSSNSFFGQVPPTISNLT-QLTELYLPLNDFTGSLPlVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGG 302
Cdd:PLN00113  95 IQTINLSNNQLSGPIPDDIFTTSsSLRYLNLSNNNFTGSIP-RGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGG 173

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 303 NNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLfsslkylllldlsGGWISqa 382
Cdd:PLN00113 174 NVLVGKIPNSLTNLTS-LEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI-------------GGLTS-- 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 383 slsldsyipstLEALLLKHCNIS-VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGfEGSSEIL 461
Cdd:PLN00113 238 -----------LNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-EIPELVI 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 462 VNSSVRILNLLSNNLEGAlphlplsvnyfsarnnryggdIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN00113 306 QLQNLEILHLFSNNFTGK---------------------IPVALTSLPRLQVLQLWSNKFSGEIPKNlgkHNNLTVLDLS 364

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 539 KNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPL 618
Cdd:PLN00113 365 TNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 619 sppNQGSLGFPELRILEIAGNKFTGSLPpDFFENWKASSLTMNEDQGLYMVYNKVvygtyyftsleaidlqykglsmeqn 698
Cdd:PLN00113 445 ---NSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRNQFSGAVPRKL------------------------- 495

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 699 RVLSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAY 778
Cdd:PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575

                        650       660       670
                 ....*....|....*....|....*....|....
gi 332643439 779 MNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCG 812
Cdd:PLN00113 576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 88-597 1.96e-35

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 145.38  E-value: 1.96e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  88 TLKSN-------SSLFQFHQLRHLYLSYNNFTpSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNEL 160
Cdd:PLN00113 194 TLASNqlvgqipRELGQMKSLKWIYLGYNNLS-GEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKL 272

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 161 TGSLsfvrnlrkltildvshnhfsgtlnPNsSLFELHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPP 240
Cdd:PLN00113 273 SGPI------------------------PP-SIFSLQKLISLDL-SDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPV 326

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 241 TISNLTQLTELYLPLNDFTGSLPlvQNLTK---LSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGsiEVPNS-SL 316
Cdd:PLN00113 327 ALTSLPRLQVLQLWSNKFSGEIP--KNLGKhnnLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEG--EIPKSlGA 402

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 317 SSRLENLNLGENHFEGKIIEPISKlinlkelhlsflntsypinlklfsslkylllldlsggwisqaslsldsyipstlea 396
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTK-------------------------------------------------------- 426

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 397 lllkhcnisvfpnilktLPNLEFIALSTNKISGKIPEWLWSLPrlssvfieenlftgfegsseilvnsSVRILNLLSNNL 476
Cdd:PLN00113 427 -----------------LPLVYFLDISNNNLQGRINSRKWDMP-------------------------SLQMLSLARNKF 464

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 477 EGALPHLPLSVNY--FSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPCPS---NFLILNLRKNNLEGSIPDTYY 551
Cdd:PLN00113 465 FGGLPDSFGSKRLenLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSsckKLVSLDLSHNQLSGQIPASFS 544

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*.
gi 332643439 552 ADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFS 597
Cdd:PLN00113 545 EMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
80-409 2.15e-24

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 106.94  E-value: 2.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  80 RLRACLSGTLKSNSSLFQFHQLRHLYLSYNNFTpsSIPSEFGMLNKLEVLFMStGGFLGQVPSSFSNLSMLSALLLHHNE 159
Cdd:COG4886   94 DLTNLTELDLSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLS-NNQLTDLPEPLGNLTNLKSLDLSNNQ 170

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 160 LTGSLSFVRNLRKLTILDVSHNHFSgtlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfgQVP 239
Cdd:COG4886  171 LTDLPEELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGNQLTD--LPEPLANLTNLETLDLSNNQL--TDL 243

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 240 PTISNLTQLTELYLPLNDFTgSLPLVQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSR 319
Cdd:COG4886  244 PELGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTT 322

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 320 LENLNLGENHFEGKIIEPISKLINLKELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLL 399
Cdd:COG4886  323 LLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402

                        330
                 ....*....|
gi 332643439 400 KHCNISVFPN 409
Cdd:COG4886  403 LTLALLDAVN 412
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
106-454 3.66e-20

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 94.23  E-value: 3.66e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 106 LSYNNFTPSSIPSEFGMLNKLEVLFMSTggflgqvPSSFSNLSMLSALLLHHNELTGSLSFVRNLRKLTILDVSHNHFSg 185
Cdd:COG4886   78 SLLLLSLLLLGLTDLGDLTNLTELDLSG-------NEELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLT- 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 186 tlNPNSSLFELHNLAYLDLGSNNFTSssLPYEFGNLNKLELLDVSSNSFfGQVPPTISNLTQLTELYLPLNDFTgSLPL- 264
Cdd:COG4886  150 --DLPEPLGNLTNLKSLDLSNNQLTD--LPEELGNLTNLKELDLSNNQI-TDLPEPLGNLTNLEELDLSGNQLT-DLPEp 223

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 265 VQNLTKLSILHLSDNHFSgTIPSsLFTMPFLSYLDLGGNNLSgsiEVPNSSLSSRLENLNLGENHFEGKIIEPISKLINL 344
Cdd:COG4886  224 LANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT---DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGL 298

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 345 KELHLSFLNTSYPINLKLFSSLKYLLLLDLSGGWISQASLSLDSYIPSTLEALLLKHCNISVFPNILKTLPNLEFIALST 424
Cdd:COG4886  299 NSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEAT 378

                        330       340       350
                 ....*....|....*....|....*....|
gi 332643439 425 NKISGKIPEWLWSLPRLSSVFIEENLFTGF 454
Cdd:COG4886  379 LLTLALLLLTLLLLLLTTTAGVLLLTLALL 408
PLN03150 PLN03150
hypothetical protein; Provisional
 714-819 3.53e-18

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 89.49  E-value: 3.53e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 714 LEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQLSGTIPNGIGTLSFLAYMNVSHNQLNGEIPQ- 792
Cdd:PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAa 509

                         90       100
                 ....*....|....*....|....*...
gi 332643439 793 -GTQITGQPKSSFEGNAGLCGLPLQESC 819
Cdd:PLN03150 510 lGGRLLHRASFNFTDNAGLCGIPGLRAC 537
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
106-495 1.21e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 79.98  E-value: 1.21e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 106 LSYNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSLSFVRNLRKLTILDVSHNHFSG 185
Cdd:COG4886    5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 186 TLNPNSSLFELHNLAYLDLGSNNftssslpyEFGNLNKLELLDVSSNSfFGQVPPTISNLTQLTELYLPLNDFTGSLPLV 265
Cdd:COG4886   85 LLLGLTDLGDLTNLTELDLSGNE--------ELSNLTNLESLDLSGNQ-LTDLPEELANLTNLKELDLSNNQLTDLPEPL 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 266 QNLTKLSILHLSDNHFSgTIPSSLFTMPFLSYLDLGGNNLSgSIEVPNSSLSSrLENLNLGENHFEgKIIEPISKLINLK 345
Cdd:COG4886  156 GNLTNLKSLDLSNNQLT-DLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTN-LEELDLSGNQLT-DLPEPLANLTNLE 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 346 ELHLSFLNTSYPINLKLFsslkylllldlsggwisqaslsldsyipSTLEALLLKHCNISVFPNiLKTLPNLEFIALSTN 425
Cdd:COG4886  232 TLDLSNNQLTDLPELGNL----------------------------TNLEELDLSNNQLTDLPP-LANLTNLKTLDLSNN 282

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 426 KISGKIPEWLWSLPRLSSVFIEENLFTGFEGSSEILVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNN 495
Cdd:COG4886  283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTL 352
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
449-845 7.79e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 61.87  E-value: 7.79e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 449 NLFTGFEGSSEILVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIppc 528
Cdd:COG4886   36 ALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEELSNL--- 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 529 pSNFLILNLRKNNLEgSIPDTYYADAPLRSLDVGYNRLTgKLPRSLLNCSALQFLSVDHNGIKDtFPFSLKALPKLQVLI 608
Cdd:COG4886  113 -TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELD 188

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 609 LHSNNFY---GPLSppnqgslGFPELRILEIAGNKFTgSLPPDFFEnwkassltmnedqglymvynkvvygtyyFTSLEA 685
Cdd:COG4886  189 LSNNQITdlpEPLG-------NLTNLEELDLSGNQLT-DLPEPLAN----------------------------LTNLET 232

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 686 IDLqykglsmeqnrvlsssatidfSGNRLEgEIPEsIGLLKALIALNLSNNAFTgHIPlSLANLKKIESLDLSSNQLSGT 765
Cdd:COG4886  233 LDL---------------------SNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLP-PLANLTNLKTLDLSNNQLTDL 287

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 766 IPNGIGTLSFLAYMNVSHNQLNGEIPQGTQITGQPKSSFEGNAGLCGLPLQESCFGTNAPPAQHPKEEEEEEEEEEQVLN 845
Cdd:COG4886  288 KLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLL 367
PLN03150 PLN03150
hypothetical protein; Provisional
 214-289 3.38e-09

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 60.60  E-value: 3.38e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 332643439 214 LPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP-LVQNLTKLSILHLSDNHFSGTIPSSL 289
Cdd:PLN03150 434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPeSLGQLTSLRILNLNGNSLSGRVPAAL 510
PLN03150 PLN03150
hypothetical protein; Provisional
 227-320 1.28e-08

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 58.67  E-value: 1.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 227 LDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPL-VQNLTKLSILHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNL 305
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502

                         90
                 ....*....|....*
gi 332643439 306 SGsiEVPnSSLSSRL 320
Cdd:PLN03150 503 SG--RVP-AALGGRL 514
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
198-653 2.45e-07

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 54.17  E-value: 2.45e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 198 NLAYLDLGSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLPLVQNLTKLSILHLS 277
Cdd:COG4886    2 LLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 278 DNHFSGTiPSSLFTMPFLSYLDLGGNNLSGSIevpnsslsSRLENLNLGENHFEgKIIEPISKLINLKELHLSFLNtsyp 357
Cdd:COG4886   82 LSLLLLG-LTDLGDLTNLTELDLSGNEELSNL--------TNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQ---- 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 358 inlklfsslkylllldlsggwISQASLSLDSYipSTLEALLLKHCNISVFPNILKTLPNLEFIALSTNKISgKIPEWLWS 437
Cdd:COG4886  148 ---------------------LTDLPEPLGNL--TNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQIT-DLPEPLGN 203

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 438 LPRLSSVFIEENLFTGFegSSEILVNSSVRILNLLSNNLEgalphlplsvnyfsarnnryggDIPlSICSRRSLVFLDLS 517
Cdd:COG4886  204 LTNLEELDLSGNQLTDL--PEPLANLTNLETLDLSNNQLT----------------------DLP-ELGNLTNLEELDLS 258

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 518 YNNFTGpIPPCP--SNFLILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFP 595
Cdd:COG4886  259 NNQLTD-LPPLAnlTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTL 337

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 332643439 596 FSLKALPKLQVLILHSNNFYGPLSPPNQGSLGFPELRILEIAGNKFTGSLPPDFFENW 653
Cdd:COG4886  338 TTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLT 395
PLN03150 PLN03150
hypothetical protein; Provisional
 196-263 1.01e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 52.51  E-value: 1.01e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 332643439 196 LHNLAYLDLgSNNFTSSSLPYEFGNLNKLELLDVSSNSFFGQVPPTISNLTQLTELYLPLNDFTGSLP 263
Cdd:PLN03150 441 LRHLQSINL-SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 535-632 1.74e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 51.74  E-value: 1.74e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 535 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPklqvliLH--SN 612
Cdd:PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL------LHraSF 520

                         90       100
                 ....*....|....*....|
gi 332643439 613 NFygplsPPNQGSLGFPELR 632
Cdd:PLN03150 521 NF-----TDNAGLCGIPGLR 535
PLN03150 PLN03150
hypothetical protein; Provisional
 535-616 5.77e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 50.20  E-value: 5.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 535 LNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNF 614
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502


                 ..
gi 332643439 615 YG 616
Cdd:PLN03150 503 SG 504
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 97-282 8.32e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.86  E-value: 8.32e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  97 QFHQLRHLYLsYNNFtpssipsefgmLNKLEVLfmstggflgqvpssfSNLSMLSALLLHHNELTgSLSFVRNLRKLTIL 176
Cdd:cd21340   22 LCKNLKVLYL-YDNK-----------ITKIENL---------------EFLTNLTHLYLQNNQIE-KIENLENLVNLKKL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 177 DVSHNHFS---GtLNPNSSLFELH------------------------NLAYLDLGSNNFTSSSlpyEFGNLNKLELLDV 229
Cdd:cd21340   74 YLGGNRISvveG-LENLTNLEELHienqrlppgekltfdprslaalsnSLRVLNISGNNIDSLE---PLAPLRNLEQLDA 149

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 332643439 230 SSNsffgqvppTISNLTQLTELylplndftgslplVQNLTKLSILHLSDNHFS 282
Cdd:cd21340  150 SNN--------QISDLEELLDL-------------LSSWPSLRELDLTGNPVC 181
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
385-614 8.78e-06

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 49.70  E-value: 8.78e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 385 SLDSYIPSTLEALLLKHCNISVFPNILK------------------TLPN-LEFIALSTNKISgKIPEWLWSlpRLSSVF 445
Cdd:PRK15370 192 TIPACIPEQITTLILDNNELKSLPENLQgniktlyansnqltsipaTLPDtIQEMELSINRIT-ELPERLPS--ALQSLD 268

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 446 IEENLFTGFEGSseilVNSSVRILNLLSNNLEGALPHLPLSVNYFSARNNRYG---GDIPLSIcsrRSLVFLDLSYNNFT 522
Cdd:PRK15370 269 LFHNKISCLPEN----LPEELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpETLPPGL---KTLEAGENALTSLP 341

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 523 GPIPPCPSNFLILNLRKNNLEGSIPDTyyadapLRSLDVGYNRLTgKLPRSLlnCSALQFLSVDHNG---IKDTFPFSLK 599
Cdd:PRK15370 342 ASLPPELQVLDVSKNQITVLPETLPPT------ITTLDVSRNALT-NLPENL--PAALQIMQASRNNlvrLPESLPHFRG 412

                        250
                 ....*....|....*
gi 332643439 600 ALPKLQVLILHSNNF 614
Cdd:PRK15370 413 EGPQPTRIIVEYNPF 427
PLN03150 PLN03150
hypothetical protein; Provisional
 469-547 9.23e-06

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 49.43  E-value: 9.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 469 LNLLSNNLEGALP-------HLPlSVNYfsaRNNRYGGDIPLSICSRRSLVFLDLSYNNFTGPIPPC---PSNFLILNLR 538
Cdd:PLN03150 423 LGLDNQGLRGFIPndisklrHLQ-SINL---SGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESlgqLTSLRILNLN 498


                 ....*....
gi 332643439 539 KNNLEGSIP 547
Cdd:PLN03150 499 GNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 85-164 8.55e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 46.35  E-value: 8.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439  85 LSGTLKSNSSlfQFHQLRHLYLSyNNFTPSSIPSEFGMLNKLEVLFMSTGGFLGQVPSSFSNLSMLSALLLHHNELTGSL 164
Cdd:PLN03150 430 LRGFIPNDIS--KLRHLQSINLS-GNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRV 506
PLN03150 PLN03150
hypothetical protein; Provisional
 701-746 2.06e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.19  E-value: 2.06e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 332643439 701 LSSSATIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSL 746
Cdd:PLN03150 465 ITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
LRR_8 pfam13855
Leucine rich repeat;
171-234 2.14e-04

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 39.82  E-value: 2.14e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 332643439  171 RKLTILDVSHNHFSGTlnPNSSLFELHNLAYLDLGSNNFTSSSlPYEFGNLNKLELLDVSSNSF 234
Cdd:pfam13855   1 PNLRSLDLSNNRLTSL--DDGAFKGLSNLKVLDLSNNLLTTLS-PGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 135-219 2.37e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 44.81  E-value: 2.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 135 GFLGQVPSSFSNLSMLSALLLHHNELTGSLSF-VRNLRKLTILDVSHNHFSGTLnpNSSLFELHNLAYLDLgSNNFTSSS 213
Cdd:PLN03150 429 GLRGFIPNDISKLRHLQSINLSGNSIRGNIPPsLGSITSLEVLDLSYNSFNGSI--PESLGQLTSLRILNL-NGNSLSGR 505


                 ....*.
gi 332643439 214 LPYEFG 219
Cdd:PLN03150 506 VPAALG 511
PLN03150 PLN03150
hypothetical protein; Provisional
 406-481 9.13e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.88  E-value: 9.13e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 332643439 406 VFPNILKTLPNLEFIALSTNKISGKIPEWLWSLPRLSSVFIEENLFTGFEGSSEILVnSSVRILNLLSNNLEGALP 481
Cdd:PLN03150 433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL-TSLRILNLNGNSLSGRVP 507
PLN03150 PLN03150
hypothetical protein; Provisional
 566-646 1.16e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 42.50  E-value: 1.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332643439 566 LTGKLPRSLLNCSALQFLSVDHNGIKDTFPFSLKALPKLQVLILHSNNFYGPLsPPNQGSLgfPELRILEIAGNKFTGSL 645
Cdd:PLN03150 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI-PESLGQL--TSLRILNLNGNSLSGRV 506


                 .
gi 332643439 646 P 646
Cdd:PLN03150 507 P 507
PLN03150 PLN03150
hypothetical protein; Provisional
 274-349 2.46e-03

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 41.34  E-value: 2.46e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 332643439 274 LHLSDNHFSGTIPSSLFTMPFLSYLDLGGNNLSGSIEVPNSSLSSrLENLNLGENHFEGKIIEPISKLINLKELHL 349
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITS-LEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
LRR_8 pfam13855
Leucine rich repeat;
706-762 3.23e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 36.73  E-value: 3.23e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 332643439  706 TIDFSGNRLEGEIPESIGLLKALIALNLSNNAFTGHIPLSLANLKKIESLDLSSNQL 762
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
534-590 6.07e-03

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 35.96  E-value: 6.07e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 332643439  534 ILNLRKNNLEGSIPDTYYADAPLRSLDVGYNRLTGKLPRSLLNCSALQFLSVDHNGI 590
Cdd:pfam13855   5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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