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Conserved domains on  [gi|332189726|gb|AEE27847|]
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naphthalene 1,2-dioxygenase subunit alpha (DUF1264) [Arabidopsis thaliana]

Protein Classification

OBAP family protein( domain architecture ID 10536408)

oil body-associated protein (OBAP) family protein similar to Arabidopsis thaliana oil body-associated protein 1 (OBAP1) that is necessary to maintain the structure of the oil bodies and for seed germination in Arabidopsis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1264 pfam06884
Protein of unknown function (DUF1264); This family contains a number of bacterial and ...
 37-202 9.63e-112

Protein of unknown function (DUF1264); This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 200 residues long. Some family members are annotated as putative lipoproteins.


:

Pssm-ID: 429173  Cd Length: 168  Bit Score: 317.90  E-value: 9.63e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726   37 FAPINQIHQHLCAFHFYAYDMTRQVEAHHFCGHINEDMRQCLIYDGPDANARLIGLEYIVTEKLFMTLPDDEKKLWHTHE 116
Cdd:pfam06884   1 FKPVKQICAHLCAFHVYADDPTRQVEAHHYCSHVNEDFRQCLIYDSPEPDARLIGVEYIISERLFETLPEEEKKLWHSHV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726  117 WEVKGGFLFMP--GVPEAIQRQDLEKVAKTYGKVYHFWQVDLGHQLPIGLPNIMMAVTRDGQLYPEMIKETEKQFGVSID 194
Cdd:pfam06884  81 YEVKSGMLVMPapGVPEAAWKAEMEELVKTYGKTWHTWQVDRGDKLPLGPPQLMMSFTADGQLDPKLVKERDERFGIDTE 160


                  ....*...
gi 332189726  195 KERESRAY 202
Cdd:pfam06884 161 EKRESRAD 168
 
Name Accession Description Interval E-value
DUF1264 pfam06884
Protein of unknown function (DUF1264); This family contains a number of bacterial and ...
 37-202 9.63e-112

Protein of unknown function (DUF1264); This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 200 residues long. Some family members are annotated as putative lipoproteins.


Pssm-ID: 429173  Cd Length: 168  Bit Score: 317.90  E-value: 9.63e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726   37 FAPINQIHQHLCAFHFYAYDMTRQVEAHHFCGHINEDMRQCLIYDGPDANARLIGLEYIVTEKLFMTLPDDEKKLWHTHE 116
Cdd:pfam06884   1 FKPVKQICAHLCAFHVYADDPTRQVEAHHYCSHVNEDFRQCLIYDSPEPDARLIGVEYIISERLFETLPEEEKKLWHSHV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726  117 WEVKGGFLFMP--GVPEAIQRQDLEKVAKTYGKVYHFWQVDLGHQLPIGLPNIMMAVTRDGQLYPEMIKETEKQFGVSID 194
Cdd:pfam06884  81 YEVKSGMLVMPapGVPEAAWKAEMEELVKTYGKTWHTWQVDRGDKLPLGPPQLMMSFTADGQLDPKLVKERDERFGIDTE 160


                  ....*...
gi 332189726  195 KERESRAY 202
Cdd:pfam06884 161 EKRESRAD 168
 
Name Accession Description Interval E-value
DUF1264 pfam06884
Protein of unknown function (DUF1264); This family contains a number of bacterial and ...
 37-202 9.63e-112

Protein of unknown function (DUF1264); This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 200 residues long. Some family members are annotated as putative lipoproteins.


Pssm-ID: 429173  Cd Length: 168  Bit Score: 317.90  E-value: 9.63e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726   37 FAPINQIHQHLCAFHFYAYDMTRQVEAHHFCGHINEDMRQCLIYDGPDANARLIGLEYIVTEKLFMTLPDDEKKLWHTHE 116
Cdd:pfam06884   1 FKPVKQICAHLCAFHVYADDPTRQVEAHHYCSHVNEDFRQCLIYDSPEPDARLIGVEYIISERLFETLPEEEKKLWHSHV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 332189726  117 WEVKGGFLFMP--GVPEAIQRQDLEKVAKTYGKVYHFWQVDLGHQLPIGLPNIMMAVTRDGQLYPEMIKETEKQFGVSID 194
Cdd:pfam06884  81 YEVKSGMLVMPapGVPEAAWKAEMEELVKTYGKTWHTWQVDRGDKLPLGPPQLMMSFTADGQLDPKLVKERDERFGIDTE 160


                  ....*...
gi 332189726  195 KERESRAY 202
Cdd:pfam06884 161 EKRESRAD 168
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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