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Conserved domains on  [gi|52697592|gb|AAU86533|]
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lysine-specific permease, partial [Shigella boydii]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK10836 super family cl30114
lysine transporter; Provisional
1-202 2.56e-136

lysine transporter; Provisional


The actual alignment was detected with superfamily member PRK10836:

Pssm-ID: 182767  Cd Length: 489  Bit Score: 390.33  E-value: 2.56e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10836  15 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10836  95 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVG 174
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 52697592  161 VMMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10836 175 VLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGF 216
 
Name Accession Description Interval E-value
PRK10836 PRK10836
lysine transporter; Provisional
1-202 2.56e-136

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 390.33  E-value: 2.56e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10836  15 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10836  95 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVG 174
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 52697592  161 VMMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10836 175 VLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGF 216
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
1-202 1.17e-116

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 339.45  E-value: 1.17e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:COG0833  12 RGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAF 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592  81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:COG0833  92 GFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIIVG 171
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 52697592 161 VMMIIGIFKGaQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:COG0833 172 LLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGF 212
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
1-166 2.54e-50

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 169.00  E-value: 2.54e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPV-SGSFATYGQNYVEEG 79
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    80 FGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVV 159
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161

                  ....*..
gi 52697592   160 GVMMIIG 166
Cdd:TIGR00913 162 SIILNCG 168
AA_permease pfam00324
Amino acid permease;
7-202 2.69e-44

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 153.24  E-value: 2.69e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     7 HLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGW 86
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    87 NYWYNWAVTIAVDLVAAQLVMSWW--FPDTPG-WIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVMM 163
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 52697592   164 IIGiFKGAQPAGWSNWT--IGEAPFAGGFA-AMIGVAMIVGF 202
Cdd:pfam00324 161 LSG-GNPNDGAIFRYLGdnGGKNNFPPGFGkGFISVFVIAFF 201
 
Name Accession Description Interval E-value
PRK10836 PRK10836
lysine transporter; Provisional
1-202 2.56e-136

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 390.33  E-value: 2.56e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10836  15 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10836  95 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVG 174
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 52697592  161 VMMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10836 175 VLMIIGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGF 216
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
1-202 1.17e-116

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 339.45  E-value: 1.17e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:COG0833  12 RGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAF 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592  81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:COG0833  92 GFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIAFIIVG 171
                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 52697592 161 VMMIIGIFKGaQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:COG0833 172 LLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGF 212
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
1-202 5.27e-71

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 222.30  E-value: 5.27e-71
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:COG1113  15 RGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPA-VLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592  81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:COG1113  94 GFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAFIVVG 173
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 52697592 161 VMMIIGIFK--GAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:COG1113 174 LLLIFFGFGlpGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVF 217
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
1-166 2.54e-50

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 169.00  E-value: 2.54e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPV-SGSFATYGQNYVEEG 79
Cdd:TIGR00913   2 KSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVvSGSFATYASRFVDPA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    80 FGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVV 159
Cdd:TIGR00913  82 FGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFIIL 161

                  ....*..
gi 52697592   160 GVMMIIG 166
Cdd:TIGR00913 162 SIILNCG 168
PRK11387 PRK11387
S-methylmethionine permease;
1-167 1.38e-44

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 153.85  E-value: 1.38e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK11387  14 RTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGPAT 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK11387  94 GYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILAFIVLG 173

                 ....*..
gi 52697592  161 VMMIIGI 167
Cdd:PRK11387 174 GAAIFGF 180
AA_permease pfam00324
Amino acid permease;
7-202 2.69e-44

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 153.24  E-value: 2.69e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     7 HLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGW 86
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    87 NYWYNWAVTIAVDLVAAQLVMSWW--FPDTPG-WIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVMM 163
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 52697592   164 IIGiFKGAQPAGWSNWT--IGEAPFAGGFA-AMIGVAMIVGF 202
Cdd:pfam00324 161 LSG-GNPNDGAIFRYLGdnGGKNNFPPGFGkGFISVFVIAFF 201
PRK10746 PRK10746
putative transport protein YifK; Provisional
1-200 1.22e-39

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 140.72  E-value: 1.22e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10746  10 RGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS-VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFF 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10746  89 GYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIG 168
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 52697592  161 VMMII-GIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIV 200
Cdd:PRK10746 169 LGVIFfGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIV 209
PRK10249 PRK10249
phenylalanine transporter; Provisional
1-202 3.08e-38

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 137.04  E-value: 3.08e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10249  21 RGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPA-VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFA 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10249 100 GFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFG 179
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 52697592  161 VMMIIGiFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10249 180 LWLLFS-GHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMF 220
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
1-175 1.23e-36

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 132.55  E-value: 1.23e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK11049  20 RNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPS-IIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWA 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK11049  99 GYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVG 178
                        170
                 ....*....|....*
gi 52697592  161 VMMIIGIFKgaQPAG 175
Cdd:PRK11049 179 LVMVAMHFQ--SPTG 191
proY PRK10580
putative proline-specific permease; Provisional
1-202 4.20e-35

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 128.40  E-value: 4.20e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10580   9 RGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPS-VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10580  88 GYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAG 167
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 52697592  161 VMMII-GIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10580 168 IGIIIwGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMF 210
PRK10238 PRK10238
aromatic amino acid transporter AroP;
1-202 8.08e-35

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 127.76  E-value: 8.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:PRK10238  12 RGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPG-IILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFA 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:PRK10238  91 GFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFG 170
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 52697592  161 VMMIIGIFKGAQPAGWSNWTIGeAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10238 171 GWLLFSGNGGPQATVSNLWDQG-GFLPHGFTGLVMMMAIIMF 211
PRK15049 PRK15049
L-asparagine permease;
6-164 2.26e-32

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 121.65  E-value: 2.26e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    6 RHLTMIAIGGSIGTGLFVASGATISQAGPGGALLsYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALG 85
Cdd:PRK15049  33 RQVQMIAIGGAIGTGLFLGAGARLQMAGPALALV-YLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAG 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   86 WNYWYNWAVTIAVDLVAAQLVMSWW--FPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVMM 163
Cdd:PRK15049 112 WMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVF 191

                 .
gi 52697592  164 I 164
Cdd:PRK15049 192 L 192
PRK10197 PRK10197
GABA permease;
10-202 2.12e-26

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 104.70  E-value: 2.12e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   10 MIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYW 89
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPA-VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYW 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   90 YNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVMMIIGIFK 169
Cdd:PRK10197  80 WFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYP 159
                        170       180       190
                 ....*....|....*....|....*....|...
gi 52697592  170 GAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGF 202
Cdd:PRK10197 160 YAEVSGISRLWDSGGFMPNGFGAVLSAMLITMF 192
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-200 8.55e-18

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 80.33  E-value: 8.55e-18
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   1 RELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGF 80
Cdd:COG0531  11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA-AILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGPLL 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592  81 GFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVG 160
Cdd:COG0531  90 GFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLLFIVVG 169
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 52697592 161 VMMIIG-IFKGAQPAGWSNWTIGEApFAGGFAAMIGVAMIV 200
Cdd:COG0531 170 LFAFDPaNFTPFLPAGGGLSGVLAA-LALAFFAFTGFEAIA 209
AA_permease_2 pfam13520
Amino acid permease;
8-196 8.44e-08

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 51.16  E-value: 8.44e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     8 LTMIAIGGSIGTGLFVASGAtisqAGPGGALLSYILIGLMVYFLMTSL--GELAAYMPVSGSFATYGQNYVEEGFGFALG 85
Cdd:pfam13520   6 AFALVIGSVIGSGIFVAPLV----ASGGPALIVWGWIAAIIFSLAVGLvyAELSSALPRSGGIYVYLENAFGKFVAFLAG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    86 WNYWYNWAVTIA-VDLVAAQLVMSWWFPDTPGWIW-----SALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVV 159
Cdd:pfam13520  82 WSNWFAYVLGLAsSASVAASYLLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIII 161
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 52697592   160 gVMMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGV 196
Cdd:pfam13520 162 -LGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGV 197
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
1-190 1.05e-04

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 42.11  E-value: 1.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592     1 RELKARHLTMIAIGGSIGTGLFVASGATI-SQAGPgGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEG 79
Cdd:TIGR00906  28 RCLTTWDLMALGIGSTIGAGIYVLTGEVArNDSGP-AIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVGEL 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    80 FGFALGWNYWYNW-----AVTIAVDLVAAQLV---MSWWFPDTPGWIWSALFL-------GIIFLLNYISVRGFGEAEyW 144
Cdd:TIGR00906 107 WAFITGWNLILEYvigtaAVARSWSAYFDELLnkqIGQFRRTYFKLNYDGLAEypdffavCLILLLAVLLSFGVKESA-W 185
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 52697592   145 FSliKVATVIIFIVVGVMMIIGIFKGaqpaGWSNWTIGEAPFAGGF 190
Cdd:TIGR00906 186 VN--KIFTAINILVLLFVIIAGFTKA----DVANWSITEEKGAGGF 225
frlA PRK11357
amino acid permease;
11-194 1.69e-04

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 41.38  E-value: 1.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   11 IAIGGSIGTGLFVASGATISQAG-PGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGW-NY 88
Cdd:PRK11357  18 IAVGTTVGSGIFVSVGEVAKAAGtPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWaSF 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592   89 WYNWAVTIAVDLVAAQLVMSWWFPDTP--GWIWSALFLGIIFLLNYISVRGFGEAEYWFSLIKVATVIIFIVVGVMMIIG 166
Cdd:PRK11357  98 WANDAPSLSIMALAIVSNLGFLTPIDPllGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKA 177
                        170       180
                 ....*....|....*....|....*...
gi 52697592  167 IFKGAQPagwsnwtIGEAPFAGGFAAMI 194
Cdd:PRK11357 178 ENFAAPT-------TTAIGATGSFMALL 198
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
11-166 2.21e-04

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 41.27  E-value: 2.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    11 IAIGGSIGTGLFVASGATISQAG-PGGALLSYILIGLMVYFLMTSLGELAAYMPVSGSfatyGQNYVEEGFGFALGW-NY 88
Cdd:TIGR00911  52 IIVGTIIGSGIFVSPKGVLKNAGsVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGG----EYNYILEVFGPLLAFlRL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52697592    89 WYNWAV-----TIAVDLVAAQLVMSWWFPDTPGWIWSALFLGII-----FLLNYISVRGFGEAEYWFSLIKVATVIIFIV 158
Cdd:TIGR00911 128 WIELLVirpgsQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLcvlllTLVNCLSVKWATRVQDIFTACKLLALLLIII 207

                  ....*...
gi 52697592   159 VGVMMIIG 166
Cdd:TIGR00911 208 TGWVQLGK 215
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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