NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|51989305|gb|AAU21190|]
View 

taste receptor T2R5 [Macaca mulatta]

Protein Classification

7tm_TAS2R domain-containing protein( domain architecture ID 10526320)

7tm_TAS2R domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
TAS2R pfam05296
Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste ...
1-290 7.07e-97

Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste receptor proteins (TAS2Rs). TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate epithelia in humans and mice, and are organized in the genome in clusters. The proteins are genetically linked to loci that influence bitter perception in mice and humans.


:

Pssm-ID: 283059  Cd Length: 303  Bit Score: 287.63  E-value: 7.07e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305     1 MLSAGLGLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLF----QSSR 76
Cdd:pfam05296   1 MLSALEGIFLIVAVVEFLLGILGNGFIVLVNCIDWVKKRKLSSIDLILTSLAISRICLQWLILLDNFIIVFFpntyLSGK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305    77 WLRYLNVFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTV-------H 149
Cdd:pfam05296  81 LLRIISLFWTFLNHLSLWFATCLSVFYCLKIANFSHPIFLWLKWRISKVVPWLLLGSLLISFLNTVQIPNSIkasidpeL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   150 HPPQGNSSIRYPFEHWQYLYVFQL-NSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFL 228
Cdd:pfam05296 161 IKYKRNTTWDLRVSKFELFSSLVLlNLGSLLPFIVFLISFLLLIFSLWRHTRQMQLNSTGFRDPSTEAHVRALKSLISFL 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51989305   229 LLHLVYIVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTCQKILWKT 290
Cdd:pfam05296 241 ILYISYFLSFLISIISFLLPKNKLAFIFGEIVTYLYPSGHSFILILGNPKLKQAFLKILLKL 302
 
Name Accession Description Interval E-value
TAS2R pfam05296
Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste ...
1-290 7.07e-97

Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste receptor proteins (TAS2Rs). TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate epithelia in humans and mice, and are organized in the genome in clusters. The proteins are genetically linked to loci that influence bitter perception in mice and humans.


Pssm-ID: 283059  Cd Length: 303  Bit Score: 287.63  E-value: 7.07e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305     1 MLSAGLGLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLF----QSSR 76
Cdd:pfam05296   1 MLSALEGIFLIVAVVEFLLGILGNGFIVLVNCIDWVKKRKLSSIDLILTSLAISRICLQWLILLDNFIIVFFpntyLSGK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305    77 WLRYLNVFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTV-------H 149
Cdd:pfam05296  81 LLRIISLFWTFLNHLSLWFATCLSVFYCLKIANFSHPIFLWLKWRISKVVPWLLLGSLLISFLNTVQIPNSIkasidpeL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   150 HPPQGNSSIRYPFEHWQYLYVFQL-NSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFL 228
Cdd:pfam05296 161 IKYKRNTTWDLRVSKFELFSSLVLlNLGSLLPFIVFLISFLLLIFSLWRHTRQMQLNSTGFRDPSTEAHVRALKSLISFL 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51989305   229 LLHLVYIVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTCQKILWKT 290
Cdd:pfam05296 241 ILYISYFLSFLISIISFLLPKNKLAFIFGEIVTYLYPSGHSFILILGNPKLKQAFLKILLKL 302
7tm_TAS2R cd13950
mammalian taste receptors type 2, member of the seven-transmembrane G protein-coupled receptor ...
8-283 5.55e-89

mammalian taste receptors type 2, member of the seven-transmembrane G protein-coupled receptor superfamily; This group represents a family of mammalian taste receptors (TAS2Rs), which function as bitter taste receptors. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320088  Cd Length: 288  Bit Score: 266.74  E-value: 5.55e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   8 LLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLFQ----SSRWLRYLNV 83
Cdd:cd13950   1 IFLIIIVGEFLIGILGNGFIVLVNCIDWIKSRKLSSIDFILTSLAISRIGLLWTIILNSILSVFYPdiylSGNVLRTLDI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  84 FWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHHPPQ-------GNS 156
Cdd:cd13950  81 LWMFLNHSSLWFATCLSVFYCLKIANFSHPFFLWLKWRINRVVPWLLLGSLLISLLISLPIVWVIYSVYQnnskeesNNT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 157 SIRYPFEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIV 236
Cdd:cd13950 161 SKFQVKKTSYFYSFILLNLGSLIPFILSLISFFLLIFSLWRHTRQMQLNATGSRDPSTEAHIRAMKSMISFLILFIIYFL 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 51989305 237 ASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTC 283
Cdd:cd13950 241 ALIITILSYSFLENKLAVLFCEVLMALYPSGHSFILILGNPKLKQAF 287
 
Name Accession Description Interval E-value
TAS2R pfam05296
Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste ...
1-290 7.07e-97

Taste receptor protein (TAS2R); This family consists of several forms of eukaryotic taste receptor proteins (TAS2Rs). TAS2Rs are G protein-coupled receptors expressed in subsets of taste receptor cells of the tongue and palate epithelia in humans and mice, and are organized in the genome in clusters. The proteins are genetically linked to loci that influence bitter perception in mice and humans.


Pssm-ID: 283059  Cd Length: 303  Bit Score: 287.63  E-value: 7.07e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305     1 MLSAGLGLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLF----QSSR 76
Cdd:pfam05296   1 MLSALEGIFLIVAVVEFLLGILGNGFIVLVNCIDWVKKRKLSSIDLILTSLAISRICLQWLILLDNFIIVFFpntyLSGK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305    77 WLRYLNVFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTV-------H 149
Cdd:pfam05296  81 LLRIISLFWTFLNHLSLWFATCLSVFYCLKIANFSHPIFLWLKWRISKVVPWLLLGSLLISFLNTVQIPNSIkasidpeL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   150 HPPQGNSSIRYPFEHWQYLYVFQL-NSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFL 228
Cdd:pfam05296 161 IKYKRNTTWDLRVSKFELFSSLVLlNLGSLLPFIVFLISFLLLIFSLWRHTRQMQLNSTGFRDPSTEAHVRALKSLISFL 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 51989305   229 LLHLVYIVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTCQKILWKT 290
Cdd:pfam05296 241 ILYISYFLSFLISIISFLLPKNKLAFIFGEIVTYLYPSGHSFILILGNPKLKQAFLKILLKL 302
7tm_TAS2R cd13950
mammalian taste receptors type 2, member of the seven-transmembrane G protein-coupled receptor ...
8-283 5.55e-89

mammalian taste receptors type 2, member of the seven-transmembrane G protein-coupled receptor superfamily; This group represents a family of mammalian taste receptors (TAS2Rs), which function as bitter taste receptors. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320088  Cd Length: 288  Bit Score: 266.74  E-value: 5.55e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   8 LLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLFQ----SSRWLRYLNV 83
Cdd:cd13950   1 IFLIIIVGEFLIGILGNGFIVLVNCIDWIKSRKLSSIDFILTSLAISRIGLLWTIILNSILSVFYPdiylSGNVLRTLDI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  84 FWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHHPPQ-------GNS 156
Cdd:cd13950  81 LWMFLNHSSLWFATCLSVFYCLKIANFSHPFFLWLKWRINRVVPWLLLGSLLISLLISLPIVWVIYSVYQnnskeesNNT 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 157 SIRYPFEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIV 236
Cdd:cd13950 161 SKFQVKKTSYFYSFILLNLGSLIPFILSLISFFLLIFSLWRHTRQMQLNATGSRDPSTEAHIRAMKSMISFLILFIIYFL 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 51989305 237 ASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTC 283
Cdd:cd13950 241 ALIITILSYSFLENKLAVLFCEVLMALYPSGHSFILILGNPKLKQAF 287
7tm_TAS2R1 cd15016
mammalian taste receptor 2, subtype 1, member of the seven-transmembrane G protein-coupled ...
11-281 6.85e-44

mammalian taste receptor 2, subtype 1, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 1, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320144  Cd Length: 283  Bit Score: 151.21  E-value: 6.85e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  11 LVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLI-ILDLTLFPLFQSSRwLRYLNVFWVLVS 89
Cdd:cd15016   5 LFAVIQFLTGIFANGFIVVVNGIDLIKQRKMAPLDLLLSCLATSRICLQLFIfYLNLAVLSLIKFSV-FAENFVIFMFVN 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  90 QASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHHPPQGN------SSIRYPFE 163
Cdd:cd15016  84 ELGLWFATWLGVFYCAKIATIAHPLFLWLKMRISKLVPWLILGSLLYASITSVFHSKYTWPISQKLllsffsSNATTQIK 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 164 HWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIVASPFsIT 243
Cdd:cd15016 164 EISALQLSLLIFELSLPLLIFLVAVLLLIFSLGRHTRQMRTTAAGTRDPSRSAHISALLSILSFLILYLSHYMAAAL-LS 242
                       250       260       270
                ....*....|....*....|....*....|....*...
gi 51989305 244 SKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQ 281
Cdd:cd15016 243 SQIFQFGSLFFLFCILVIGAYPSGHSIILILGNPKLKQ 280
7tm_TAS2R40-like cd15908
taste receptor 2, subtypes 39 and 40, and similar receptors, member of the seven-transmembrane ...
10-282 1.29e-40

taste receptor 2, subtypes 39 and 40, and similar receptors, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtypes 39 and 40, which function as bitter taste receptors. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (taste of glutamate MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320574  Cd Length: 289  Bit Score: 142.60  E-value: 1.29e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  10 MLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLFQSS----RWLRYLNVFW 85
Cdd:cd15908   3 LVILGIESIIGILGNGFIVAINLTEWVRSKRLSTSDRILIFLSLSRLCLQSWMMLENVCSLFFPSFynedNVYKTFKVIF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  86 VLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHHpPQGNSSIRYPFEHW 165
Cdd:cd15908  83 MFLNYSSLWFAAWLSVFYCVKIANFTHPLFLWLKWRITSLMPWLLILSVLISFSTSLPFSWDVYN-VYCNSSIPLPSSNS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 166 QYL----------YVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYI 235
Cdd:cd15908 162 TKKkyiketnlvnLIFLYNVGIFLPLIMFILSATLLILSLKRHTLQMQNNATGSRDPSMEAHMGAIKAISSFLILYIFNF 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 51989305 236 VASpFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15908 242 VAL-ILTLSNIFDTNSTWNILCKIIMAAYPAGHSILLILGNPKLRRA 287
7tm_TAS2R7-like cd15023
mammalian taste receptor 2, subtypes 7 and 9, member of the seven-transmembrane G ...
9-281 8.15e-38

mammalian taste receptor 2, subtypes 7 and 9, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtypes 7 and 9, which function as bitter taste receptors. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320151  Cd Length: 291  Bit Score: 135.29  E-value: 8.15e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   9 LMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILD---LTLFP-LFQSSRWLRYLNVF 84
Cdd:cd15023   3 YMILIAGELTIGIWGNGFIVLVNCIGWLKRRDIALIDIILISLAISRICLLCVISLDgfiMVLFPdTYGNGKLMSIIDVF 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  85 WVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHH--------PPQGNS 156
Cdd:cd15023  83 WTFTNHSSIWFTSCLSIFYLLKIANISHPLFLWLKWRINKVILAILLGSLVLSLIISVPKTENLWDdfrkcvktKHEENI 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 157 SIRYPFEHWQYLYV-FQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYI 235
Cdd:cd15023 163 TLKFKVSKTQGASKqVFLNLGVLVPFILSLISFLLLLFSLVRHTKQMQLHATGFRDPSTEAHMRAIKAVIIFLLLLIVYY 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 51989305 236 VASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQ 281
Cdd:cd15023 243 LAFLVATSSYLIPQGKLVVMFGEIITLIFPSSHSFILIMGNSKLRE 288
7tm_TAS2R3 cd15020
mammalian taste receptor 2, subtype 3, member of the seven-transmembrane G protein-coupled ...
7-282 1.62e-37

mammalian taste receptor 2, subtype 3, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 3, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320148  Cd Length: 290  Bit Score: 134.44  E-value: 1.62e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   7 GLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTL---FPLFQ-SSRWLRYLN 82
Cdd:cd15020   1 IVFLVLTITEFILGIWVNGFIGLVNCIHWIKSKKISLSDFIITNLALSRIILLCIIITDSLLlvfYPHFHdSGIIMQIID 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  83 VFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQV--GLTVHHPPQGNSSIRY 160
Cdd:cd15020  81 IFWTFANHLSIWLVTCLSVFYCLKIANFSHPAFLWLKWRVSRVVVWILLGSVLFSFFSTAALikKFKIYSALRQMRLTEN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 161 PFEHWQY----LYVFQLNSG--SYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVY 234
Cdd:cd15020 161 CTEDIRRkeieYYVAHILGAlwSVIPFIVSLISYLLLILSLRRHTQQMQHHTTGSRDPSTEAHVRATKIILSFLLLFIFY 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 51989305 235 IVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15020 241 FVAFFIGSSSFFLPDTKLAIMIGELITAAYPSVHSFILILQNNKLKQA 288
7tm_TAS2R16 cd15017
mammalian taste receptor 2, subtype 16, member of the seven-transmembrane G protein-coupled ...
10-280 7.75e-37

mammalian taste receptor 2, subtype 16, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 16, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320145  Cd Length: 285  Bit Score: 132.80  E-value: 7.75e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  10 MLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDlTLFPLFQSSRWLRYLNVFWVLVS 89
Cdd:cd15017   4 MIIFVLESLAAIVQNGFIVTVLGREWVRCRRLPPGDMILACLGISRFCLQWISILN-NFLSYFDFNYVFWYFGIIWDFFN 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  90 QASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLL--------TVQVGLTVHHPPQGNSSIRYP 161
Cdd:cd15017  83 TLTFWLTSLLAVFYCVKISSFTHPIFLWLKWRISRLVPWLLLGSLIISCLSiipsivgnYIQAQLITSGNSSGNSTLIYR 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 162 FEHWQYLYVFQLNS-GSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVY----IV 236
Cdd:cd15017 163 LQAFQQYYFIPHQMvMLSIPFLLFLVSIILLMFSLCQHLGQMRHHSPGPCDPSTQAHTTALKSLAFFLIFFTSYfltlII 242
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 51989305 237 ASPFSITSKTYppdltSVFIWETLMAAYPSLHSLMLIMGIPRVK 280
Cdd:cd15017 243 SIIKIIFVKNS-----WFWAWEAVIYAGISIHSTSLMLSSPKLR 281
7tm_TAS2R10 cd15021
mammalian taste receptor 2, subtype 10, member of the seven-transmembrane G protein-coupled ...
7-282 1.89e-35

mammalian taste receptor 2, subtype 10, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 10, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320149  Cd Length: 285  Bit Score: 129.04  E-value: 1.89e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   7 GLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILD--LTLF--PLFQSSRWLRYLN 82
Cdd:cd15021   1 GILLFVVTSEAVLGVLGNGFIALVNCIDYARNKKLSKIGFILTGLAISRIFLIWIIILDayVKLFspHMLASGNLIEYIS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  83 VFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRA---YNLSLWCLLGYFIISLLLTVQVgLTVHHPPQGNSSIR 159
Cdd:cd15021  81 YIWVIINHLSVWFATSLSIFYFLKIANFSHYIFLWLKRRIdvvFIFLIGCLLISWLISFPQVAKI-INDIKMKYRNTSWQ 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 160 YPFEHWQYL--YVFqLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIVA 237
Cdd:cd15021 160 LHLEKSEFFinYVF-TNLGVIFFFMVALITCFLLIISLWRHNRQMQSNVSGFRDLNTEAHVKAMKVLISFIILFILYFIG 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 51989305 238 SPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15021 239 ISIETLCFFLPENKLLFIFGLTTACMYPCCHSFILILANSQLKQA 283
7tm_TAS2R13 cd15026
mammalian taste receptor 2, subtype 13, member of the seven-transmembrane G protein-coupled ...
7-283 1.93e-35

mammalian taste receptor 2, subtype 13, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 13, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320154  Cd Length: 287  Bit Score: 129.14  E-value: 1.93e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   7 GLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLI----ILDLTLFPLFQSSRWLRYLN 82
Cdd:cd15026   1 NILTLIIIAEFIFGNLSNGFIVLINCIDWVKKRKLSSIDKILLILAISRIGLIWETlvywFKAQYYSSFFITGTELRIIV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  83 VFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVQVGLTVHHPP---QGNSSIR 159
Cdd:cd15026  81 FSWILSNHFSLWLATILSIFYLLKIANFSWPIFLYLKWRIKKVILMMLLGSLVFLFLNLIQINIHIEDWFyqyERNTTWN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 160 Y---PFEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIV 236
Cdd:cd15026 161 SmesDFAKFSELVLFNMTMFSVIPFTVALISFLLLIFSLWKHLQKMQLNSRGHRDPSTKAHRNALRIMVSFLLLYASYFL 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 51989305 237 ASPFSITSKTYPPDLTSVFIwETLMAAYPSLHSLMLIMGIPRVKQTC 283
Cdd:cd15026 241 SLLISWIAQKHQSELAYIIC-IITGLFYPSSHSFILILGNSKLRQAS 286
7tm_TAS2R14-like cd15019
mammalian taste receptor 2, subtype 14, member of the seven-transmembrane G protein-coupled ...
9-287 1.31e-32

mammalian taste receptor 2, subtype 14, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 14, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320147  Cd Length: 290  Bit Score: 121.48  E-value: 1.31e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   9 LMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLF----PLFQSSRWLRYLNVF 84
Cdd:cd15019   2 FTIILSVEFIIGNLGNGFIALVNCMDWVKRRKISSVDQILTALAISRIGLLWLVFISWLISvlypALLMTEKMLRIINIS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  85 WVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTV------QVGLTVHHPPQGNSSI 158
Cdd:cd15019  82 WTVTNHFSIWLATCLSIFYFLKIANFSNSIFLYLKWRVKKVVSVTLLVSLVLLFLNIVlinthiDVWIDGYKRNMSYSSS 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 159 RYPFEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIVAS 238
Cdd:cd15019 162 SSNSAQFSKLLLFTNTMFTFIPFTVSLTTFLLLIFSLWKHLKKMQHNAKGSRDASTTAHIKALQTVIAFLLLYTIFFLSL 241
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 51989305 239 PFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTCQKIL 287
Cdd:cd15019 242 LVQVWSSELLEKNLIILFCQVIGIAFPSGHSCVLILGNSKLRQASLSVL 290
7tm_TAS2R8 cd15022
mammalian taste receptor 2, subtype 8, member of the seven-transmembrane G protein-coupled ...
7-282 1.20e-31

mammalian taste receptor 2, subtype 8, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 8, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320150  Cd Length: 292  Bit Score: 119.11  E-value: 1.20e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   7 GLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILD---LTLFP-LFQSSRWLRYLN 82
Cdd:cd15022   1 NIFIILITGEFIIGILGNGYIALVNWIDWIKKKKISSIDYILTSLAISRICLISVIVVNgivIVLYPdVYENDKLQIVIS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  83 VFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLL-----TVQVGLTVHH---PPQG 154
Cdd:cd15022  81 TFWTFANYLSMWFATCLNVFYLLKIANFSHPLFLWLKWRIDRVVHWILLGCFAISLLVslilaIVLSDDYRFHaiaKHKR 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 155 NSSIRYPFEHWQYLYVFQL-NSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLV 233
Cdd:cd15022 161 NITEMFHVSKIQYFEPLTLfNLFAIVPFTVSLISFFLLIRSLWRHTKQMKLSATGGRDPSTEAHVRAIKTVTSFLFFFFL 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 51989305 234 YIVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15022 241 YYLSSLLVTFSYLMTEYKLAMMFGEIVAILYPLGHSLILIIGNNKLRQA 289
7tm_TAS2R43-like cd15027
mammalian taste receptor 2, subtype 43, and related proteins, member of the ...
6-283 4.27e-30

mammalian taste receptor 2, subtype 43, and related proteins, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (T2R) subtype 43, which functions as a bitter taste receptor. Also included are the closely related taste receptors TAS2R19, TAS2R20, TAS2R30, TAS2R31, TAS2R45 and TAS2R50. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320155  Cd Length: 292  Bit Score: 114.98  E-value: 4.27e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   6 LGLLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDL---TLFPLFQSSRWLRYLN 82
Cdd:cd15027   4 LIILSILVMAEFVLGNFANGFIALVNCIDWVKRQKISSVDQILTALAVSRIGLLWVILINWyatVFNPALYSLEVRIIIH 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  83 VFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIIslLLTVQVGLTVHHPPQ-----GN-- 155
Cdd:cd15027  84 IAWAVTNHFSTWLATSLSIFYLLKIANFSNLIFLYLKRRVKSVILVILLGSLVF--LVFHLAVVNIDENVWvneyeGNvt 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 156 -SSIRYPFEHWQYLYVFQLnsGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVY 234
Cdd:cd15027 162 wKTKLRDIIHLSNMTVFTL--ANFIPFTMSLISFLLLIFSLCKHLKKMQLHGKGSQDPSTKVHIKALQTVISFLLLFAIY 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 51989305 235 IVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQTC 283
Cdd:cd15027 240 FLSLIISVWSSNRLQNKPVLLLCQAIGILYPSSHSFILIWGNKKLKQAF 288
7tm_TAS2R38 cd15025
mammalian taste receptor 2, subtype 38, member of the seven-transmembrane G protein-coupled ...
10-282 2.67e-29

mammalian taste receptor 2, subtype 38, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (T2R) subtype 38, which functions as a bitter taste receptor. Genetic variants of human TAS2R38 influence the ability to taste synthetic compounds 6-n-propylthiouracil (PROP) and phenylthiocarbamide (PTC). Thus, sensitivity to the bitter taste of PROP is often used as a marker for individual differences in taste perception that can affect food preferences and intake. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320153  Cd Length: 293  Bit Score: 113.01  E-value: 2.67e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  10 MLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLFQS-----SRWLRYLNVF 84
Cdd:cd15025   4 LFLSVLEFAVGILANAFIVLVNFWDVVKRQPLNNCDIVLLCLSITRLFLQGLLFLDAIQLTHFQQmkdplSHSYQAIIML 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  85 WVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTV---------QVGLTVHHPPQGN 155
Cdd:cd15025  84 WMIANQVSLWLAACLSLLYCSKIARFSHTFLLCLASWVSRRIPQMLLGSLLFSCICTVlcvwdffsrSHSTVTSSLHMNN 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 156 SSIRYPFEHWQYLYVFQL-NSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVY 234
Cdd:cd15025 164 TELNLQIEKLNFFYSFLFcNVGSVPPFLLFLVSSGVLIISLGRHMRTMKAQTSGSRDPSLEAHIRALKSLVSFLCFYVVS 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 51989305 235 IVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15025 244 FCAALISVPLLLLWHNKIGVMVCVGIMAACPSGHAAILISGNAKLRRV 291
7tm_TAS2R41-like cd15018
mammalian taste receptor 2, subtype 41, member of the seven-transmembrane G protein-coupled ...
9-280 8.35e-29

mammalian taste receptor 2, subtype 41, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 41, which functions as a bitter taste receptor. Also included is the closely related TAS2R60. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320146  Cd Length: 290  Bit Score: 111.74  E-value: 8.35e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   9 LMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLII---LDLTLFPL-FQSSRWLRYLNVF 84
Cdd:cd15018   3 LVLILFLLCLVAIVGNGFIVVALGREWLLRRTLLPCDKLLVSLGASRFCLQWVVMgknIYVFLHPVaFPYNPVLQFLSFH 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  85 WVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLTVqVGLTVHHPPQGNSSIRYPF-- 162
Cdd:cd15018  83 WDFLNSATLWFCTWLSVFYCVKIATFTHPVFLWLKWRFSGWVPWLLLGSVGISSLTTI-LFFIGNHSIYQNYLRRGLSsn 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 163 ---EHWQ------YLYVFQLNSGSyLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLV 233
Cdd:cd15018 162 nttYNWRrslekfYFFSLKLITWS-IPTSVFLISMVLLINSLRRHTKKMLHNLSSLQDPSTQAHIKALKALISFLILFAS 240
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 51989305 234 YIVASPFSiTSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVK 280
Cdd:cd15018 241 YFLSLVLS-AAGVFPSQEVRYWVWQIVIYLCIAVHPFILLFSNPKLR 286
7tm_TAS2R40 cd15014
mammalian taste receptor 2, subtype 40, member of the seven-transmembrane G-protein coupled ...
10-281 1.32e-28

mammalian taste receptor 2, subtype 40, member of the seven-transmembrane G-protein coupled receptor superfamily; This group includes the mammalian taste receptor 2 (T2R) subtype 40, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (taste of glutamate MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320142  Cd Length: 290  Bit Score: 111.18  E-value: 1.32e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  10 MLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLT---LFPL-FQSSRWLRYLNVFW 85
Cdd:cd15014   4 FVVSTIECIVGIIGNGFITVIYGTEWVRSKRLPTGERLMLMLSFSRLLLQIWMMVEITyslLFPIiYNHNAMYKLFKVIS 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  86 VLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCL---------LGYFIISLLLTVQVGLTVHHPPQGNS 156
Cdd:cd15014  84 VFLNYCNLWFAAWLNVFYCLKIVNFAHPLFLLMKQKIIVLMPRLLslsvlvslsLSSFFSKDIFNVYVNTSVPIPSSNST 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 157 SIRYPFEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIV 236
Cdd:cd15014 164 KMKYFFETNVLNLAFLYYMGIFVPLFMFIMAATLLITSLKRHTLHMESSTTGSRDSSMEAHIGAIKSTSYSLILYIINAL 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*
gi 51989305 237 ASpFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQ 281
Cdd:cd15014 244 AL-FISMSNIFGAYSSWNSLCKIIMTAYPAGQSVHLILRNPGLRR 287
7tm_TAS2R42 cd15024
mammalian taste receptor 2, subtype 42, member of the seven-transmembrane G protein-coupled ...
8-282 3.12e-26

mammalian taste receptor 2, subtype 42, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 42, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320152  Cd Length: 288  Bit Score: 104.73  E-value: 3.12e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   8 LLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILD---LTLFP-LFQSSRWLRYLNV 83
Cdd:cd15024   1 IFLILAIGEFIIGMLGNGFIGLVNCSDWVKNRKISLADCILTCLAISRIGQLLVILFDsfiLVLWPhLYGTYKLAKVVSI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  84 FWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLG---YFIISLLLT---VQVGLTVHHPPQGN-- 155
Cdd:cd15024  81 LWTLTNHLTTWFATCLSIFYFLKIANFSHPLFLWLKWRISRVLLVLLLGslfLLFFDFLLLetfSDFWLNIYTIDEGNlt 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 156 --SSIRYPFeHWQYLYVFQLNsgSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLV 233
Cdd:cd15024 161 lsSEESKTL-YVKSLILFSLI--YLIPFLLSLTSLLLLFLSLVRHTRNLQLNSLGSRDSSTEAHKRAMKMVMSFLLLFII 237
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 51989305 234 YIVASPFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15024 238 HFFSIQLAGWIFFFLWKKQAILFVMLTSNIFPSGHSFILILGNSKLRQT 286
7tm_TAS2R39 cd15015
mammalian taste receptor 2, subtype 39, member of the seven-transmembrane G protein-coupled ...
8-282 6.47e-24

mammalian taste receptor 2, subtype 39, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (T2R) subtype 39, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (taste of glutamate MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320143  Cd Length: 289  Bit Score: 98.45  E-value: 6.47e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305   8 LLMLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPL---FQSSRWLRYLNVF 84
Cdd:cd15015   2 LILTLVATECTIGIIASGIIMAVNAVSWVQKKAVSITTRILLLLSVSRIGLQSIMLIEITSSIFnlsFYNSVLYRVSKVS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  85 WVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISL---LLTVQVGLTVHHppqGNSSIRYP 161
Cdd:cd15015  82 FVFLNYCSLWFAALLSFFHFVKIANFSYPLFFKLKWRISELMPWLLWLSVFISFsssMFFINHKTTVCN---NSSLSSNI 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 162 FEHWQYLYV---------FQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHL 232
Cdd:cd15015 159 CNFTMKLYVseinvvnvaFLFNLGILPPLTMFIATATLLIFSLRRHTLHMRNNATGSRNPSMEAHMQAIKETSCFLFLYI 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|
gi 51989305 233 VYIVASpFSITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15015 239 LNAAAL-FLSTSNIFDASLFWSNVCRIILPVYPAGHSVLLIQDNPGLRRT 287
7tm_TAS2R4 cd15013
mammalian taste receptor 2, subtype 4, member of the seven-transmembrane G protein-coupled ...
10-282 1.05e-23

mammalian taste receptor 2, subtype 4, member of the seven-transmembrane G protein-coupled receptor superfamily; This group includes the mammalian taste receptor 2 (TAS2R) subtype 4, which functions as a bitter taste receptor. The human TAS2R family contains about 25 functional members, which are glycoproteins and have the ability to form both homomeric and heteromeric receptor complexes. Five basic tastes are perceived by animals: bitter, sweet, sour, salty, and umami (the taste of glutamate, MSG). Among these, sour and salty are mediated by ion channels, while the perception of umami and sweet tastes is mediated by the TAS1R taste receptors, which belong to the class C GPCR family. The TAS2Rs in humans have a short extracellular N-terminus and the ligand binds within the transmembrane domain, whereas the TAS1Rs have a large N-terminal extracellular domain composed of the Venus flytrap module that forms the orthosteric (primary) ligand binding site. Signal transduction of bitter taste involves binding of bitter compounds to TAS2Rs linked to the alpha-subunit of gustducin, a heterotrimeric G protein expressed in taste receptor cells. This G-alpha subunit stimulates phosphodiesterase and decreases cAMP and cGMP levels. Further steps in the signaling cascade is still unknown. The beta-gamma-subunit of gustducin also mediates bitter taste transduction by activating phospholipase C, which leads to an increased formation of IP3 (inositol triphosphate) and DAG (diacylglycerol), thereby causing release of Ca2+ from intracellular stores and enhanced neurotransmitter release.


Pssm-ID: 320141  Cd Length: 286  Bit Score: 97.57  E-value: 1.05e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  10 MLVAVIEFLIGLIGNGILVVWSLREWIRKFSWSSYNLIILGLAGCRFLLQWLIILDLTLFPLFQSSRWLRYLNVF---WV 86
Cdd:cd15013   4 FIASVVFNFVGIVANLFIIVVNCKTWVKSHRISSSDRILFSLAITRFLMLGLFLLNTIYIATFPGSRSVYFSTFFllcWK 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305  87 LVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIISLLLT-VQVGLT----VHHPPQGNSSIRYP 161
Cdd:cd15013  84 FLDSNSLWFVTLLNILYCVKITNFQHSVFLLLKRNLSPKTPWLLLACLLISAFTTlLYIVLSqispFPEHIIGRNNTSFD 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 51989305 162 FEHWQYLYVFQLNSGSYLPLMVFLVSSGMLIISLYTHHKKMKVHLAGRGDARAKAHITALKSLGCFLLLHLVYIVASPFS 241
Cdd:cd15013 164 ISDGILTLVASLILSSSLQFILNVTSASLLIHSLRRHIQKMQKNATSFWNPQTEAHVGAMKLMIYFLILYIPYSIATLLY 243
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 51989305 242 ITSKTYPPDLTSVFIWETLMAAYPSLHSLMLIMGIPRVKQT 282
Cdd:cd15013 244 FLPSYMGKNLRAQSICMIFTTLYSPGHSVLIIITHPKLKAK 284
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH