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Conserved domains on  [gi|41394055|gb|AAS02274|]
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ATPase 8, partial (mitochondrion) [Columbina minuta]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009574)

ATP synthase F0 subunit 8 is a component of the mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 8.10e-10

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 214426  Cd Length: 54  Bit Score: 47.96  E-value: 8.10e-10
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 8.10e-10

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 47.96  E-value: 8.10e-10
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-40 6.53e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 38.09  E-value: 6.53e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 41394055    1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKS 40
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 8.10e-10

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 47.96  E-value: 8.10e-10
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-38 2.70e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 44.09  E-value: 2.70e-08
                        10        20        30
                ....*....|....*....|....*....|....*...
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPS 38
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPT 38
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-40 6.53e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 38.09  E-value: 6.53e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 41394055    1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKS 40
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-40 6.72e-06

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 38.03  E-value: 6.72e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQ 40
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-40 3.59e-05

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 36.18  E-value: 3.59e-05
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPN 40
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-40 4.25e-03

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 31.35  E-value: 4.25e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394055   1 MPQLNPSPWFFIMLTTWLTFSLIIQPKLLSFTPTNPPSNK 40
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPK 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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