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Conserved domains on  [gi|41394051|gb|AAS02272|]
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ATPase 8, partial (mitochondrion) [Columbina inca]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009578)

ATP synthase F0 subunit 8 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-53 1.75e-13

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 177191  Cd Length: 55  Bit Score: 57.19  E-value: 1.75e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWP 53
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-53 1.75e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 57.19  E-value: 1.75e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWP 53
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-53 2.58e-07

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 41.94  E-value: 2.58e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 41394051    1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWK 53
 
Name Accession Description Interval E-value
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-53 1.75e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 57.19  E-value: 1.75e-13
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWP 53
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-53 1.32e-12

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 55.28  E-value: 1.32e-12
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSnKTPTVTKTAPWTWP 53
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPT-KTNTTTNTTPWTWP 52
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-53 8.60e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 45.43  E-value: 8.60e-09
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWP 53
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-53 9.38e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 43.04  E-value: 9.38e-08
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|...
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTvTKTAPWTWP 53
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKK-NKPESWNWP 52
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-53 2.58e-07

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 41.94  E-value: 2.58e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 41394051    1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTKTAPWTWP 53
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWK 53
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-50 2.81e-03

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 31.74  E-value: 2.81e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|.
gi 41394051   1 MPQLNPNPWFFIMLITWLTFSLIIQPKLLSFTSTNSPSNKTPTVTK-TAPW 50
Cdd:MTH00102  1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKqNTPW 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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