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Conserved domains on  [gi|41394033|gb|AAS02263|]
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ATPase 8, partial (mitochondrion) [Chalcophaps stephani]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009574)

ATP synthase F0 subunit 8 is a component of the mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 3.52e-09

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 214426  Cd Length: 54  Bit Score: 46.42  E-value: 3.52e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPPYNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 3.52e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 46.42  E-value: 3.52e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPPYNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-42 6.05e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 38.48  E-value: 6.05e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 41394033    1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPPYNKSL 42
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLK 42
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-40 3.52e-09

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 46.42  E-value: 3.52e-09
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPPYNK 40
Cdd:MTH00123  1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPTKT 40
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-37 2.58e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 44.48  E-value: 2.58e-08
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPP 37
Cdd:MTH00133  1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEP 37
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-42 6.05e-06

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 38.48  E-value: 6.05e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 41394033    1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPPYNKSL 42
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLK 42
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-37 2.67e-05

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 36.49  E-value: 2.67e-05
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPP 37
Cdd:MTH00072  1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEP 37
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-37 5.04e-05

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 35.80  E-value: 5.04e-05
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 41394033   1 MPQLNPNPWFLIMLLSWLTFSLLIQPKLLSFTPTNPP 37
Cdd:MTH00171  1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKP 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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