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Concise Results
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Full Results
arginine-ornithine antiporter [Streptococcus ratti FA-1 = DSM 20564]
Protein Classification
arginine-ornithine antiporter ( domain architecture ID 11498905 )
arginine-ornithine antiporter catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway
List of domain hits
Name
Accession
Description
Interval
E-value
arg_ornith_anti
TIGR03810 arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
6-469
0e+00
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 163522
Cd Length: 468
Bit Score: 603.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 KK I GL V ALTAL IIS S S IGSGIF AI P T DMA SA AA P GA A LI A W L I A G L G V LAL CL S IV N IGR KKPEL S - G IV SYA ED GFGPF 84
Cdd:TIGR03810 1 KK L GL G ALTAL VVG S M IGSGIF SL P S DMA AG AA A GA V LI G W V I T G V G M LAL AF S FQ N LAN KKPEL D g G VY SYA KA GFGPF 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 85 S GFIS G WGYWLSAWLGNVA F AT MMMK TLG R FFPIFG E GNN IV SI TV ASV I LWC MYYI V N RGVEGAA SL NTI I T LC KLVPL 164
Cdd:TIGR03810 81 M GFIS A WGYWLSAWLGNVA Y AT LLFS TLG Y FFPIFG G GNN PP SI IG ASV L LWC VHFL V L RGVEGAA FI NTI T T IA KLVPL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 165 ALY IV LA I LF F DF DTF M N N FWG T A S GGF EF G KI M E QV Q N S M M V IM WVF V G V EGA A M M S D RA QSK S II GK S TV L GL L G L L V 244
Cdd:TIGR03810 161 FVF IV IG I FA F KG DTF T N D FWG N A N GGF SL G SV M T QV K N M M L V TV WVF I G I EGA S M L S A RA EKR S DV GK A TV I GL I G V L A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 245 IYV SA S I L P YGIMTQ E Q V A A L HS P A M G YVL VDK VG N W FP VL V NI A LIISI F G S WLSWT M LPAE TT L V MA NRH L L P QK FG E 324
Cdd:TIGR03810 241 IYV LV S V L S YGIMTQ A Q L A G L KN P S M A YVL EHM VG T W GA VL I NI G LIISI L G A WLSWT L LPAE IP L L MA KDK L M P KY FG K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 325 L NA A GAPT FS L VFMT GL T QIF MF T L LF TN QAY Q FA Y SL C T A AI F V SW L YVTL YQ T KLS FK ---- L G ELP Q T L V GLV GSIF 400
Cdd:TIGR03810 321 E NA N GAPT NA L WLTN GL I QIF LL T T LF SE QAY N FA I SL A T S AI L V PY L WSAA YQ V KLS WR ggqe R G RRK Q L L I GLV ALLY 400
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 39753479 401 YL W A I W A S G ID Y F LL CL I V Y LL GI IL Y RQ ARKEKG IT e T F SAK E KVLLVL IVAGAVIA LFR L F TG Q IS I 469
Cdd:TIGR03810 401 AV W L I Y A A G LK Y L LL SA I L Y AP GI YF Y AR ARKEKG GP - V F TKG E LLIFAA IVAGAVIA IYL L A TG L IS L 468
Name
Accession
Description
Interval
E-value
arg_ornith_anti
TIGR03810 arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
6-469
0e+00
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 163522
Cd Length: 468
Bit Score: 603.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 KK I GL V ALTAL IIS S S IGSGIF AI P T DMA SA AA P GA A LI A W L I A G L G V LAL CL S IV N IGR KKPEL S - G IV SYA ED GFGPF 84
Cdd:TIGR03810 1 KK L GL G ALTAL VVG S M IGSGIF SL P S DMA AG AA A GA V LI G W V I T G V G M LAL AF S FQ N LAN KKPEL D g G VY SYA KA GFGPF 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 85 S GFIS G WGYWLSAWLGNVA F AT MMMK TLG R FFPIFG E GNN IV SI TV ASV I LWC MYYI V N RGVEGAA SL NTI I T LC KLVPL 164
Cdd:TIGR03810 81 M GFIS A WGYWLSAWLGNVA Y AT LLFS TLG Y FFPIFG G GNN PP SI IG ASV L LWC VHFL V L RGVEGAA FI NTI T T IA KLVPL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 165 ALY IV LA I LF F DF DTF M N N FWG T A S GGF EF G KI M E QV Q N S M M V IM WVF V G V EGA A M M S D RA QSK S II GK S TV L GL L G L L V 244
Cdd:TIGR03810 161 FVF IV IG I FA F KG DTF T N D FWG N A N GGF SL G SV M T QV K N M M L V TV WVF I G I EGA S M L S A RA EKR S DV GK A TV I GL I G V L A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 245 IYV SA S I L P YGIMTQ E Q V A A L HS P A M G YVL VDK VG N W FP VL V NI A LIISI F G S WLSWT M LPAE TT L V MA NRH L L P QK FG E 324
Cdd:TIGR03810 241 IYV LV S V L S YGIMTQ A Q L A G L KN P S M A YVL EHM VG T W GA VL I NI G LIISI L G A WLSWT L LPAE IP L L MA KDK L M P KY FG K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 325 L NA A GAPT FS L VFMT GL T QIF MF T L LF TN QAY Q FA Y SL C T A AI F V SW L YVTL YQ T KLS FK ---- L G ELP Q T L V GLV GSIF 400
Cdd:TIGR03810 321 E NA N GAPT NA L WLTN GL I QIF LL T T LF SE QAY N FA I SL A T S AI L V PY L WSAA YQ V KLS WR ggqe R G RRK Q L L I GLV ALLY 400
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 39753479 401 YL W A I W A S G ID Y F LL CL I V Y LL GI IL Y RQ ARKEKG IT e T F SAK E KVLLVL IVAGAVIA LFR L F TG Q IS I 469
Cdd:TIGR03810 401 AV W L I Y A A G LK Y L LL SA I L Y AP GI YF Y AR ARKEKG GP - V F TKG E LLIFAA IVAGAVIA IYL L A TG L IS L 468
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-444
1.00e-47
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 170.08
E-value: 1.00e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 1 M SE KPK K I GL VA L T AL IISSS IG S GIF AI P TDM A SA A A P G A A L I a WLIAGL GV L ALC LS IVNIGRKK P ELS G IVS YA EDG 80
Cdd:COG0531 6 S SE LKR K L GL FD L V AL GVGAI IG A GIF VL P GLA A GL A G P A A I L A - WLIAGL LA L LVA LS YAELASAF P RAG G AYT YA RRA 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 81 F GP FS GF IS GW GYW LS AW L GNV A F A TMMMKT L GRF FP IF G egnniv S ITV A S V ILWCMYYIVN RGV EGA A SL N T I I T LC K 160
Cdd:COG0531 85 L GP LL GF LA GW ALL LS YV L AVA A V A VAFGGY L SSL FP AG G ------ S VLI A L V LILLLTLLNL RGV KES A KV N N I L T VL K 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 161 L VP L A L Y IV LAILF FD FDT F m NN F WGTAS G GFEFGK imeqvqn SMMVIMWV F V G V E GA A MMSDR A Q - S K SI I GKSTV L G L 239
Cdd:COG0531 159 L LV L L L F IV VGLFA FD PAN F - TP F LPAGG G LSGVLA ------- ALALAFFA F T G F E AI A NLAEE A K n P K RN I PRAII L S L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 240 L GLL V I Y VSA S ILPY G IMTQEQV AA LHS P a MGYVLVDKV G N W FPV L VNIALII S IF G SWLSWTMLPAETTLV MA NRH LLP 319
Cdd:COG0531 231 L IVG V L Y ILV S LALT G VVPYDEL AA SGA P - LADAAEAVF G P W GAI L IALGALL S LL G ALNASILGASRLLYA MA RDG LLP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 320 QK F GELNAA - G A P TFSLVFMTGLTQIF mft LL FTNQAYQFAY SL CTAAIFVSW L Y V T L YQTK L SFKLGE L ------ P QT L 392
Cdd:COG0531 310 KV F AKVHPR f G T P VNAILLTGVIALLL --- LL LGAASFTALA SL ASVGVLLAY L L V A L AVIV L RRRRPD L prpfrv P LP L 386
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 39753479 393 VGLV G SIFY L WAIWAS G IDYF L LC L IVYLL G II LY RQA R KEKGITETFSAK E 444
Cdd:COG0531 387 IPIL G ILLC L FLLYLL G PGAL L IG L VLLAI G LL LY LLY R RRHPKLLKEAEE E 438
PRK10644
PRK10644 arginine/agmatine antiporter;
6-427
5.40e-28
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 115.66
E-value: 5.40e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 K K I GL VAL T ALIISSSI GSG I F AI P TDM AS AAAPGAAL ia WL IAGL G V L A L CLSIVNIGRKK P ELS G IVS YA EDG FGPF S 85
Cdd:PRK10644 8 H K V GL IPV T LMVAGNIM GSG V F LL P ANL AS TGGIAIYG -- WL VTII G A L G L SMVYAKMSSLD P SPG G SYA YA RRC FGPF L 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 86 G FISGWG YWL SA W L GN V A FATMMMKT L GR FFPI FGE gn NI V SITVAS V I LW CMYYIVNR G VEGAASLNTII T LCK L V P LA 165
Cdd:PRK10644 86 G YQTNVL YWL AC W I GN I A MVVIGVGY L SY FFPI LKD -- PL V LTITCV V V LW IFVLLNIV G PKMITRVQAVA T VLA L I P IV 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 166 LYI V LAILF F DFD T F M NNF wg TA SG GFE FG K I meqv Q NSMM V IM W V F V GVE G A AMMSDRAQS - K SIIGKS T VL G L L GLL V 244
Cdd:PRK10644 164 GIA V FGWFW F RGE T Y M AAW -- NV SG LGT FG A I ---- Q STLN V TL W S F I GVE S A SVAAGVVKN p K RNVPIA T IG G V L IAA V 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 245 I YV SA S ILPY G IMTQEQVAALH SP a M G YVLVDKV G NWFPVL V NIALIISIF GS WLS WT M L PAE T TLVM A NRH L L P QK F GE 324
Cdd:PRK10644 238 C YV LS S TAIM G MIPNAALRVSA SP - F G DAARMAL G DTAGAI V SFCAAAGCL GS LGG WT L L AGQ T AKAA A DDG L F P PI F AR 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 325 L N A AG A P TFS L VFMTG L TQ IF MFTLLFT N QAYQ F AYSLCTAA IF VSWL Y VTLYQTK L SFKL G ELPQ ----- TL V G L VGSI 399
Cdd:PRK10644 317 V N K AG T P VAG L LIVGV L MT IF QLSSISP N ASKE F GLVSSVSV IF TLVP Y LYTCAAL L LLGH G HFGK arpay LA V T L IAFV 396
410 420
....*....|....*....|....*...
gi 39753479 400 FYL WA IWA SG IDYFLLCLIVYLLGIIL Y 427
Cdd:PRK10644 397 YCI WA VVG SG AKEVMWSFVTLMVITAF Y 424
AA_permease_2
pfam13520 Amino acid permease;
46-405
6.39e-26
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 109.32
E-value: 6.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 46 W LI A GLGV LA LC L SIVNIGRKK P ELS GI VS Y A E DG FG P F SG F IS GW GY W LSAW LG NVAF A TMMMKT L GRFFPIFGEGNNI 125
Cdd:pfam13520 37 W IA A IIFS LA VG L VYAELSSAL P RSG GI YV Y L E NA FG K F VA F LA GW SN W FAYV LG LASS A SVAASY L LSALGPDLVPTTW 116
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 126 VSITV A SV IL WCMYY I VN RGV EGA A SLNT I ITLC KL V - PL A L Y I V L AILFF D FDT F MNNFWGT asg GFE F GKIMEQ V QNS 204
Cdd:pfam13520 117 LTYGI A IA IL IIFAI I NI RGV RES A KIQN I LGIL KL L l PL I L I I I L GLVTA D GGG F NLLSGEW --- HTF F PDGWPG V FAG 193
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 205 MMVIM W V F V G V E G AA MM S DRAQSKS i IG K STVL G LLGLL V I Y VSAS I LPY G IMTQEQV A ALH - SPAMGYV L VDK VG N - W F 282
Cdd:pfam13520 194 FLGVL W S F T G F E S AA NV S EEVKKRN - VP K AIFI G VIIVG V L Y ILVN I AFF G VVPDDEI A LSS g LGQVAAL L FQA VG G k W G 272
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 283 PVL V N I A L II S IF G SWLSWTMLPAETTLVM A NRHL LP QK -- F GEL N AA G A P TFSLVFMTG L TQ I FMFTL L FTNQ AY QFAY 360
Cdd:pfam13520 273 AII V V I L L AL S LL G AVNTAIVGASRLLYAL A RDGV LP FS rf F AKV N KF G S P IRAIILTAI L SL I LLLLF L LSPA AY NALL 352
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 39753479 361 SL CTAAIFV S W L YVTLYQTK L SF K LGE L PQT ---- L V GLV G SI F Y L WA I 405
Cdd:pfam13520 353 SL SAYGYLL S Y L LPIIGLLI L RK K RPD L GRI pgrw P V AIF G IL F S L FL I 401
Name
Accession
Description
Interval
E-value
arg_ornith_anti
TIGR03810 arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
6-469
0e+00
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 163522
Cd Length: 468
Bit Score: 603.20
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 KK I GL V ALTAL IIS S S IGSGIF AI P T DMA SA AA P GA A LI A W L I A G L G V LAL CL S IV N IGR KKPEL S - G IV SYA ED GFGPF 84
Cdd:TIGR03810 1 KK L GL G ALTAL VVG S M IGSGIF SL P S DMA AG AA A GA V LI G W V I T G V G M LAL AF S FQ N LAN KKPEL D g G VY SYA KA GFGPF 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 85 S GFIS G WGYWLSAWLGNVA F AT MMMK TLG R FFPIFG E GNN IV SI TV ASV I LWC MYYI V N RGVEGAA SL NTI I T LC KLVPL 164
Cdd:TIGR03810 81 M GFIS A WGYWLSAWLGNVA Y AT LLFS TLG Y FFPIFG G GNN PP SI IG ASV L LWC VHFL V L RGVEGAA FI NTI T T IA KLVPL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 165 ALY IV LA I LF F DF DTF M N N FWG T A S GGF EF G KI M E QV Q N S M M V IM WVF V G V EGA A M M S D RA QSK S II GK S TV L GL L G L L V 244
Cdd:TIGR03810 161 FVF IV IG I FA F KG DTF T N D FWG N A N GGF SL G SV M T QV K N M M L V TV WVF I G I EGA S M L S A RA EKR S DV GK A TV I GL I G V L A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 245 IYV SA S I L P YGIMTQ E Q V A A L HS P A M G YVL VDK VG N W FP VL V NI A LIISI F G S WLSWT M LPAE TT L V MA NRH L L P QK FG E 324
Cdd:TIGR03810 241 IYV LV S V L S YGIMTQ A Q L A G L KN P S M A YVL EHM VG T W GA VL I NI G LIISI L G A WLSWT L LPAE IP L L MA KDK L M P KY FG K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 325 L NA A GAPT FS L VFMT GL T QIF MF T L LF TN QAY Q FA Y SL C T A AI F V SW L YVTL YQ T KLS FK ---- L G ELP Q T L V GLV GSIF 400
Cdd:TIGR03810 321 E NA N GAPT NA L WLTN GL I QIF LL T T LF SE QAY N FA I SL A T S AI L V PY L WSAA YQ V KLS WR ggqe R G RRK Q L L I GLV ALLY 400
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 39753479 401 YL W A I W A S G ID Y F LL CL I V Y LL GI IL Y RQ ARKEKG IT e T F SAK E KVLLVL IVAGAVIA LFR L F TG Q IS I 469
Cdd:TIGR03810 401 AV W L I Y A A G LK Y L LL SA I L Y AP GI YF Y AR ARKEKG GP - V F TKG E LLIFAA IVAGAVIA IYL L A TG L IS L 468
2A0302
TIGR00905 transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
2-469
6.76e-140
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 129983
Cd Length: 473
Bit Score: 409.83
E-value: 6.76e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 2 SE K P KK I GL V ALTAL I I S S S IGSGIF AI P TDM AS A A A PGA AL I A W L I A G L G V LAL CLSIVNIGR KKPEL S - GI VS YA ED G 80
Cdd:TIGR00905 3 EA K S KK L GL F ALTAL V I G S M IGSGIF SL P QNL AS V A G PGA VI I G W I I T G V G M LAL AFVFAILAT KKPEL D g GI YA YA RE G 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 81 FGP FS GF I SGWGYWLSAW L GNVA F A TMMMKT LG R FFP I FG E GN NIV SI TV ASV I LW CMYYI V N RGV EG AA SL NTI I T LC K 160
Cdd:TIGR00905 83 FGP YI GF M SGWGYWLSAW I GNVA Y A VLLFSA LG Y FFP L FG S GN PVP SI LG ASV L LW VFTFL V L RGV RQ AA FI NTI T T IA K 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 161 L V PL A L Y I VLAILF F DF D T F MNN FWG TASGGF ef G KIME QV Q N S M M V IM WVF V G V EGA AMM S D RA QS KS II GK S TVLG L L 240
Cdd:TIGR00905 163 L I PL F L F I IIGWFW F KL D L F TAD FWG HDVPSL -- G SVFS QV K N T M L V TL WVF I G I EGA VVS S G RA KN KS DV GK A TVLG T L 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 241 G L LVIY VSASI L PY G IMT Q EQV A A L HS P A M GY VL VDK VG N W FP VL VNIA LIIS IF GS W LSWTML P AE TTLVM A NRH L L P Q 320
Cdd:TIGR00905 241 G A LVIY ILITL L SL G VLP Q QEL A N L PN P S M AA VL EMI VG K W GA VL ISLG LIIS VL GS L LSWTML A AE VPFSA A KDG L F P K 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 321 K FG EL N AA GAP TFS L VFMTG L T Q I F MFTL L F T NQ AY QFAY SL CTAA I F V SW L YVTL Y QT KL S f K L G EL P QT ------ L VG 394
Cdd:TIGR00905 321 I FG RV N KN GAP SVA L LLTNI L I Q L F LLLT L L T SS AY NVLV SL AVVM I L V PY L LSAA Y LL KL A - K V G TY P KI knrkal I VG 399
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 39753479 395 LVGSIFYL W AIW A S G ID Y F LL CL I V Y LL GII L Y RQ ARKE K G i TET F SA KE KVLLVL IV AG A V IA LFR L FT G Q ISI 469
Cdd:TIGR00905 400 VIACVYSI W LLY A A G LK Y L LL GF I L Y AP GII F Y GR ARKE R G - KHV F NK KE ILIATI IV IA A I IA IWL L VN G S ISI 473
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-444
1.00e-47
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 170.08
E-value: 1.00e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 1 M SE KPK K I GL VA L T AL IISSS IG S GIF AI P TDM A SA A A P G A A L I a WLIAGL GV L ALC LS IVNIGRKK P ELS G IVS YA EDG 80
Cdd:COG0531 6 S SE LKR K L GL FD L V AL GVGAI IG A GIF VL P GLA A GL A G P A A I L A - WLIAGL LA L LVA LS YAELASAF P RAG G AYT YA RRA 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 81 F GP FS GF IS GW GYW LS AW L GNV A F A TMMMKT L GRF FP IF G egnniv S ITV A S V ILWCMYYIVN RGV EGA A SL N T I I T LC K 160
Cdd:COG0531 85 L GP LL GF LA GW ALL LS YV L AVA A V A VAFGGY L SSL FP AG G ------ S VLI A L V LILLLTLLNL RGV KES A KV N N I L T VL K 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 161 L VP L A L Y IV LAILF FD FDT F m NN F WGTAS G GFEFGK imeqvqn SMMVIMWV F V G V E GA A MMSDR A Q - S K SI I GKSTV L G L 239
Cdd:COG0531 159 L LV L L L F IV VGLFA FD PAN F - TP F LPAGG G LSGVLA ------- ALALAFFA F T G F E AI A NLAEE A K n P K RN I PRAII L S L 230
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 240 L GLL V I Y VSA S ILPY G IMTQEQV AA LHS P a MGYVLVDKV G N W FPV L VNIALII S IF G SWLSWTMLPAETTLV MA NRH LLP 319
Cdd:COG0531 231 L IVG V L Y ILV S LALT G VVPYDEL AA SGA P - LADAAEAVF G P W GAI L IALGALL S LL G ALNASILGASRLLYA MA RDG LLP 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 320 QK F GELNAA - G A P TFSLVFMTGLTQIF mft LL FTNQAYQFAY SL CTAAIFVSW L Y V T L YQTK L SFKLGE L ------ P QT L 392
Cdd:COG0531 310 KV F AKVHPR f G T P VNAILLTGVIALLL --- LL LGAASFTALA SL ASVGVLLAY L L V A L AVIV L RRRRPD L prpfrv P LP L 386
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 39753479 393 VGLV G SIFY L WAIWAS G IDYF L LC L IVYLL G II LY RQA R KEKGITETFSAK E 444
Cdd:COG0531 387 IPIL G ILLC L FLLYLL G PGAL L IG L VLLAI G LL LY LLY R RRHPKLLKEAEE E 438
PRK10644
PRK10644 arginine/agmatine antiporter;
6-427
5.40e-28
arginine/agmatine antiporter;
Pssm-ID: 182613 [Multi-domain]
Cd Length: 445
Bit Score: 115.66
E-value: 5.40e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 K K I GL VAL T ALIISSSI GSG I F AI P TDM AS AAAPGAAL ia WL IAGL G V L A L CLSIVNIGRKK P ELS G IVS YA EDG FGPF S 85
Cdd:PRK10644 8 H K V GL IPV T LMVAGNIM GSG V F LL P ANL AS TGGIAIYG -- WL VTII G A L G L SMVYAKMSSLD P SPG G SYA YA RRC FGPF L 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 86 G FISGWG YWL SA W L GN V A FATMMMKT L GR FFPI FGE gn NI V SITVAS V I LW CMYYIVNR G VEGAASLNTII T LCK L V P LA 165
Cdd:PRK10644 86 G YQTNVL YWL AC W I GN I A MVVIGVGY L SY FFPI LKD -- PL V LTITCV V V LW IFVLLNIV G PKMITRVQAVA T VLA L I P IV 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 166 LYI V LAILF F DFD T F M NNF wg TA SG GFE FG K I meqv Q NSMM V IM W V F V GVE G A AMMSDRAQS - K SIIGKS T VL G L L GLL V 244
Cdd:PRK10644 164 GIA V FGWFW F RGE T Y M AAW -- NV SG LGT FG A I ---- Q STLN V TL W S F I GVE S A SVAAGVVKN p K RNVPIA T IG G V L IAA V 237
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 245 I YV SA S ILPY G IMTQEQVAALH SP a M G YVLVDKV G NWFPVL V NIALIISIF GS WLS WT M L PAE T TLVM A NRH L L P QK F GE 324
Cdd:PRK10644 238 C YV LS S TAIM G MIPNAALRVSA SP - F G DAARMAL G DTAGAI V SFCAAAGCL GS LGG WT L L AGQ T AKAA A DDG L F P PI F AR 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 325 L N A AG A P TFS L VFMTG L TQ IF MFTLLFT N QAYQ F AYSLCTAA IF VSWL Y VTLYQTK L SFKL G ELPQ ----- TL V G L VGSI 399
Cdd:PRK10644 317 V N K AG T P VAG L LIVGV L MT IF QLSSISP N ASKE F GLVSSVSV IF TLVP Y LYTCAAL L LLGH G HFGK arpay LA V T L IAFV 396
410 420
....*....|....*....|....*...
gi 39753479 400 FYL WA IWA SG IDYFLLCLIVYLLGIIL Y 427
Cdd:PRK10644 397 YCI WA VVG SG AKEVMWSFVTLMVITAF Y 424
AA_permease_2
pfam13520 Amino acid permease;
46-405
6.39e-26
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 109.32
E-value: 6.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 46 W LI A GLGV LA LC L SIVNIGRKK P ELS GI VS Y A E DG FG P F SG F IS GW GY W LSAW LG NVAF A TMMMKT L GRFFPIFGEGNNI 125
Cdd:pfam13520 37 W IA A IIFS LA VG L VYAELSSAL P RSG GI YV Y L E NA FG K F VA F LA GW SN W FAYV LG LASS A SVAASY L LSALGPDLVPTTW 116
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 126 VSITV A SV IL WCMYY I VN RGV EGA A SLNT I ITLC KL V - PL A L Y I V L AILFF D FDT F MNNFWGT asg GFE F GKIMEQ V QNS 204
Cdd:pfam13520 117 LTYGI A IA IL IIFAI I NI RGV RES A KIQN I LGIL KL L l PL I L I I I L GLVTA D GGG F NLLSGEW --- HTF F PDGWPG V FAG 193
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 205 MMVIM W V F V G V E G AA MM S DRAQSKS i IG K STVL G LLGLL V I Y VSAS I LPY G IMTQEQV A ALH - SPAMGYV L VDK VG N - W F 282
Cdd:pfam13520 194 FLGVL W S F T G F E S AA NV S EEVKKRN - VP K AIFI G VIIVG V L Y ILVN I AFF G VVPDDEI A LSS g LGQVAAL L FQA VG G k W G 272
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 283 PVL V N I A L II S IF G SWLSWTMLPAETTLVM A NRHL LP QK -- F GEL N AA G A P TFSLVFMTG L TQ I FMFTL L FTNQ AY QFAY 360
Cdd:pfam13520 273 AII V V I L L AL S LL G AVNTAIVGASRLLYAL A RDGV LP FS rf F AKV N KF G S P IRAIILTAI L SL I LLLLF L LSPA AY NALL 352
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 39753479 361 SL CTAAIFV S W L YVTLYQTK L SF K LGE L PQT ---- L V GLV G SI F Y L WA I 405
Cdd:pfam13520 353 SL SAYGYLL S Y L LPIIGLLI L RK K RPD L GRI pgrw P V AIF G IL F S L FL I 401
cadB
PRK10435 cadaverine/lysine antiporter;
5-355
6.55e-20
cadaverine/lysine antiporter;
Pssm-ID: 182458
Cd Length: 435
Bit Score: 91.74
E-value: 6.55e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 5 P KKIGL V A L T ALIISSSI GSGI FAI P TDM as A AAPGA A LIA W L I AGL G VLA L CLSIVNIGR K K P ELS G IVS YA ED g FG P F 84
Cdd:PRK10435 4 A KKIGL F A C T GVVAGNMM GSGI ALL P ANL -- A SIGSI A IWG W I I SII G AMS L AYVYARLAT K N P QQG G PIA YA GE - IS P A 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 85 S GF IS G WG Y WLSA W L GN V A FATMMMKT L GR FFP IF geg N NIVSITV A SV - I L W CMYYIVNR G VEGAAS L N TI ITLCK L V P 163
Cdd:PRK10435 81 F GF QT G VL Y YHAN W I GN L A IGITAVSY L ST FFP VL --- N DPIPAGI A CI a I V W VFTFVNML G GTWVSR L T TI GLVLV L I P 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 164 LALYIVLAILF FD FD T FMN N f W G T AS ggfef GKIMEQVQN S MMVIM W V FVGVE G AA MMSDRAQS - K SIIGKS T V LG LLGL 242
Cdd:PRK10435 158 VVGTAIVGWHW FD AA T YAA N - W N T SD ----- TTDGHAIIK S ILLCL W A FVGVE S AA VSTGMVKN p K RTVPLA T M LG TGLA 231
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 243 LV IY VS A SILPY G IMTQEQV AA LHS P - A MGYVLV dk V GNW FPV LV NIALIISIFG S WL SW T ML PAETTLVM AN RHLL P QK 321
Cdd:PRK10435 232 GI IY IA A TQVIS G MFPASVM AA SGA P f A ISASTI -- L GNW AAP LV SAFTAFACLT S LG SW M ML VGQAGVRA AN DGNF P KV 309
330 340 350
....*....|....*....|....*....|....
gi 39753479 322 F GE LNAA G A P TFS L VFMTGLTQIF M FTLLFT N QA 355
Cdd:PRK10435 310 Y GE VDKN G I P KKG L LLAAVKMTAL M ILITLM N SS 343
potE
PRK10655 putrescine transporter; Provisional
1-427
1.47e-14
putrescine transporter; Provisional
Pssm-ID: 182622
Cd Length: 438
Bit Score: 75.45
E-value: 1.47e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 1 MS E K PK K I G L V A LT A L IISSSI GSGI FAI PT DM as A AAPGAALIA WL IAGL G VL AL CLSIVNI G RKKPELS G IVS YAE DG 80
Cdd:PRK10655 1 MS A K SN K M G V V Q LT I L TAVNMM GSGI IML PT KL -- A QVGTISILS WL VTAV G SM AL AYAFAKC G MFSRKSG G MGG YAE YA 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 81 FG PFSG F ISGWG Y WL S AWLG NVA F A tmm MKTL G RFFPI FG EGNNI V S I TV A SVILWCMYYIV N - R G VEGAASLNTIITLC 159
Cdd:PRK10655 79 FG KSGN F MANYT Y GV S LLIA NVA I A --- ISAV G YGTEL FG ATLSP V Q I CL A TIGVLWLCTVA N f G G ARITGQISSVTVWG 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 160 KLV P LALYIVLAILF F DFDTFMNN f W GTASGG F efgki MEQ V QN S MMVIM W V F V G V E G A AMM SD RAQS - KSIIGKSTVL G 238
Cdd:PRK10655 156 VII P VVGLSIIGWFW F SPSLYVAA - W NPHHLP F ----- FSA V GS S IAMTL W A F L G L E S A CAN SD AVEN p ERNVPIAVLG G 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 239 L LG LL VIY VSASILPY GI MTQEQV A ALHS P --- A MGYVLVDK VG N wfpv L V NIALII S IF GS W L S W TMLP A ETTLVM A NR 315
Cdd:PRK10655 230 T LG AA VIY IVSTNVIA GI VPNMEL A NSTA P fgl A FAQMFNPT VG K ---- I V MALMVM S CC GS L L G W QFTI A QVFKSS A DE 305
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 316 HLL P QK F GELNAAG AP TFSLVFMTGLTQIFMFTLLFTNQAY QF A ------------- Y S L CT AA IF vswly VTLYQTKLS 382
Cdd:PRK10655 306 GYF P KI F SRVTKVD AP VQGMLIIVVIQSLLSLMTISPSLNS QF N vlvnlavvtniip Y I L SM AA LV ----- IIQKVANVP 380
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 39753479 383 FKLGELP q TLVGL VG SIFYLW A IWA SG IDYF L LCL IV YL LG II LY 427
Cdd:PRK10655 381 PSKAKVA - NFIAF VG ALYSFY A LYS SG EEAM L YGS IV TF LG WT LY 424
frlA
PRK11357 amino acid permease;
46-373
7.02e-09
amino acid permease;
Pssm-ID: 183096 [Multi-domain]
Cd Length: 445
Bit Score: 57.56
E-value: 7.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 46 WL I A GL G V LALCLSIVNIGRKK PE LSGIVS Y AEDGFGPFSG F I SGW GYW lsa W LGNVAFATM M MKTLGRFFPIFGEGNNI 125
Cdd:PRK11357 49 FV I G GL I V IPQMCVYAELSTAY PE NGADYV Y LKNAGSRPLA F L SGW ASF --- W ANDAPSLSI M ALAIVSNLGFLTPIDPL 125
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 126 VSITV A SVILWCMYYIVN R G VEG A A SLN T I IT LC K LV P LALY I V L A I LF F DFDT F MNNFWGTASGGFE F GKIMEQVQNS m 205
Cdd:PRK11357 126 LGKFI A AGLIIAFMLLHL R S VEG G A AFQ T L IT IA K II P FTIV I G L G I FW F KAEN F AAPTTTAIGATGS F MALLAGISAT - 204
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 206 mvi M W VFV G VEGAAM M SDRAQS - KSIIGKSTVLGL L GL LV I Y VSASILPY G I M TQEQV A ALHS P - AMGYVLVDKV G NWFP 283
Cdd:PRK11357 205 --- S W SYT G MASICY M TGEIKN p GKTMPRALIGSC L LV LV L Y TLLALVIS G L M PFDKL A NSET P i SDALTWIPAL G STAG 281
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 284 VL V N I ALI I S I F GS WL S WT M LPAETTLV MA NRH L LPQK FG ELNAA - GA P TF S LVFMTG L TQI F M F TLLF T NQAYQ F AYSL 362
Cdd:PRK11357 282 IF V A I TAM I V I L GS LS S CV M YQPRLEYA MA KDN L FFKC FG HVHPK y NT P DV S IILQGA L GIF F I F VSDL T SLLGY F TLVM 361
330
....*....|...
gi 39753479 363 C -- TAAI F V S WLY 373
Cdd:PRK11357 362 C fk NTLT F G S IIW 374
AA_permease
pfam00324 Amino acid permease;
46-381
1.17e-08
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 56.94
E-value: 1.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 46 W LI A G LGVLALC LS IVN I GRKK P ELS G IVS YA EDGF GP FS GF IS GW G YWLS a W LGNV A FATM mmk TLGRFFPIFGEGNN I 125
Cdd:pfam00324 35 Y LI S G VVIFLVM LS LGE I STNG P VSG G FYT YA SRFL GP SL GF AT GW N YWLS - W ITVL A LELT --- AASILIQFWELVPD I 110
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 126 VSIT V ASVILWCMYY I V N R - GV EGAASLNTIIT L C K LVPLALY I VLA I LFF ----- DFDTFMNNFWGTASGGFEFGKIME 199
Cdd:pfam00324 111 PYLW V WGAVFLVLLT I I N L v GV KWYGEAEFWFA L I K IIAIIGF I IVG I ILL sggnp NDGAIFRYLGDNGGKNNFPPGFGK 190
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 200 QVQNSMMVIMWV F V G V E GAAMMSDRAQS - KSI I G K STVLGLLGLLVI Y VSA ----- SIL P YGIMTQEQVA A LHSPAMGYV 273
Cdd:pfam00324 191 GFISVFVIAFFA F T G I E LVGIAAGEVKN p EKS I P K AILQVIWRITIF Y ILS llaig LLV P WNDPGLLNDS A SAASPFVIF 270
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 274 LVDKVGNWFPV L V N IALIISIFGSWL S WTMLPAETTLVM A NRH L L P QKFGELNAA G A P TFSLVFMTGLTQIFMFTLLF - T 352
Cdd:pfam00324 271 FKFLGISGLAP L I N AVILTAALSAAN S SLYSGSRMLYSL A RDG L A P KFLKKVDKR G V P LRAILVSMVISLLALLLASL n P 350
330 340
....*....|....*....|....*....
gi 39753479 353 NQAYQ F AYSLCTAAIFVS W LYVT L YQTKL 381
Cdd:pfam00324 351 AIVFN F LLAISGLSGLIV W GLIS L SHLRF 379
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
6-424
2.96e-03
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 40.12
E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 6 K K I G L VALTAL I ISSS IGSGIF AI P TDMASA A APG - A ALI A W LIA G LGVLALC L SIVNI G RKK P ELS G IVS Y AEDG FGP F 84
Cdd:TIGR00911 42 K E I T L LSGVGI I VGTI IGSGIF VS P KGVLKN A GSV g L ALI M W AVC G IFSIVGA L VYAEL G TTI P KSG G EYN Y ILEV FGP L 121
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 85 SG F ISG W GYW L SAWL G NV A ----- FA TMMMKTL gr F FPIFGEGNN I VSIT V AS V I L WCMYYIVN rg V EG A ASLNT I I T L C 159
Cdd:TIGR00911 122 LA F LRL W IEL L VIRP G SQ A vnaln FA IYILTPV -- F PDCEVPEWA I RLVA V LC V L L LTLVNCLS -- V KW A TRVQD I F T A C 197
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 160 KL VP L A L Y I VLAILFFDFDTFMNNFWGT A SG G F E fg KIMEQVQNSMMVIM W VFV G ------ V EGAAMMSD R AQSKS II gk 233
Cdd:TIGR00911 198 KL LA L L L I I ITGWVQLGKGGVESLNPKN A FE G T E -- TSAGGIVLAFYSGI W AYG G wnylnf V TEEVKNPY R TLPIA II -- 273
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 234 stv LGLLGLLV IYV SAS I LPYGIMTQ E QV aa L H S P A MGYVLVDKVGNWFPVLVNIALII S I FGS WLSWTMLPAETTL V MA 313
Cdd:TIGR00911 274 --- ISMPIVTF IYV LTN I AYFTVLSP E EL -- L A S L A VAVDFGERLLGVMSWAMPALVGL S C FGS VNGSLFSSSRLFF V GG 348
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 314 NRHL LP QKFGELNAAG - A P TF SL VFMTG LT QIFM F T -- LLFTNQAYQ FA YS L CT A AIFVS -- WL YVTLYQTKLSF K LGEL 388
Cdd:TIGR00911 349 REGH LP SLLSMIHVKR l T P LP SL LIVCT LT LLML F S gd IYSLINLIS FA NW L FN A LAVAG ll WL RYKRPEMNRPI K VPLF 428
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 39753479 389 PQTLVG L VGSIFYLWAIWASGID --- Y F LLC L I --- VY LL G I 424
Cdd:TIGR00911 429 FPVFFL L SCLFLIILSLYSPPVG cgv G F IIM L T gvp VY FF G V 470
GerAB
COG5902 Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, ...
47-295
9.43e-03
Spore germination receptor GerABC, GerB subunit (amino acid transporter) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444604
Cd Length: 365
Bit Score: 38.25
E-value: 9.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 47 L I AGL GV L A L C L S IV NIGRKK P ELS g I V SYA E DGF G PFS G FIS G WG Y W L SAW L GNV ---- A F ATMMMK TL GRFF PI fgeg 122
Cdd:COG5902 44 L L AGL IG L L L A L I IV KLLKRF P GKT - L V EIS E KIL G KWL G KLL G LL Y I L YFL L IAA lvlr E F GEFIKT TL LPET PI ---- 118
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 123 nnivs ITVASVI L WCMY Y I V NR G V E GA A SLNT I ITLCK L VP L A L YIV L AILFF DF DTFM ---- N NFWGTAS G GF efgkim 198
Cdd:COG5902 119 ----- WVIILLF L LVAV Y A V RG G I E VI A RVAE I LFPLI L IL L L L LLL L SLPEI DF SNLL pvle N GLKPILK G AL ------ 187
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 39753479 199 eqvqnsmm VIMWV F V G V E GAA M MSDRAQS K SIIG K STVL G L L GLLVIYVSASILPY G IMTQ E QVAA L HS P AMGYVLVDKV 278
Cdd:COG5902 188 -------- PTSFP F G G F E ILL M LYPYVKK K KKAK K AALI G I L ISGLLLTLVVLVSI G VFGP E ETSR L TF P TLELARLIEI 259
250 260
....*....|....*....|
gi 39753479 279 G NWF --- PVLVN I AL II S IF 295
Cdd:COG5902 260 G DFL erl ESIFI I IW II G IF 279
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
