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Conserved domains on  [gi|34809050|gb|AAQ82622|]
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starch synthase IVa precursor [Oryza sativa Japonica Group]

Protein Classification

glycogen synthase( domain architecture ID 11477301)

glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, a key step of glycogen biosynthesis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-972 0e+00

transferase, transferring glycosyl groups


:

Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1828.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939   5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939  84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939 164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939 239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939 319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939 399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  474 SSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWT 553
Cdd:PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  554 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 633
Cdd:PLN02939 559 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFN 638
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  634 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQD 713
Cdd:PLN02939 639 SARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQD 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  714 TLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIR 793
Cdd:PLN02939 719 TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIR 798
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  794 HAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:PLN02939 799 HAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  874 YGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPAS 953
Cdd:PLN02939 879 YGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSAS 958
                        970
                 ....*....|....*....
gi 34809050  954 QYENLYQSAVAQARGAAQT 972
Cdd:PLN02939 959 QYEELYQRAVARARAAANR 977
 
Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-972 0e+00

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1828.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939   5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939  84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939 164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939 239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939 319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939 399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  474 SSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWT 553
Cdd:PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  554 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 633
Cdd:PLN02939 559 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFN 638
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  634 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQD 713
Cdd:PLN02939 639 SARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQD 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  714 TLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIR 793
Cdd:PLN02939 719 TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIR 798
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  794 HAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:PLN02939 799 HAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  874 YGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPAS 953
Cdd:PLN02939 879 YGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSAS 958
                        970
                 ....*....|....*....
gi 34809050  954 QYENLYQSAVAQARGAAQT 972
Cdd:PLN02939 959 QYEELYQRAVARARAAANR 977
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
477-962 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 605.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFsNNVWTGTV 556
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLY-VKVFEGVV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   557 EGLPVYFIEPQHpskFFWR-AQYYGE--HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYatrGFS 633
Cdd:TIGR02095  80 EGVPVYFIDNPS---LFDRpGGIYGDdyPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVY---RPN 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   634 SARICFTCHNFEYQGTAPAPDLSYCGLDveqldrPDRMQDNA---HGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGR 709
Cdd:TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLP------PEYFHMEGlefYGRVNFLKGGIVYADRVTTVSPTYAREILtPEFGY 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   710 GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGL 789
Cdd:TIGR02095 228 GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL-PVDDDVPLFGVISRLTQQKGV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   790 HLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQM 869
Cdd:TIGR02095 307 DLLLAALPELLELGGQLVVLGTGD-PELEEALRELA--ERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQL 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   870 IAMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 949
Cdd:TIGR02095 384 YAMRYGTVPIVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDFSWD 460
                         490
                  ....*....|...
gi 34809050   950 SPASQYENLYQSA 962
Cdd:TIGR02095 461 KSAKQYVELYRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
478-961 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 597.62  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 478 HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIqsYFDGNLFSNNVWTGTVE 557
Cdd:cd03791   1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEV--KVGGRGEEVGVFELPVD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 558 GLPVYFIEPQHPSKFFWR--AQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSA 635
Cdd:cd03791  79 GVDYYFLDNPEFFDRPGLpgPPGYDYPDNAERFAFFSRAALELLRRLGFQPDIIHANDWHTALVPAYLKTRYRGPGFKKI 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 636 RICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEV-RSEGGRGLQDT 714
Cdd:cd03791 159 KTVFTIHNLAYQGLFPLDTLAELGLP-PELFHIDGLEF--YGQINFLKAGIVYADRVTTVSPTYAKEIlTPEYGEGLDGV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 715 LKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLHLIRH 794
Cdd:cd03791 236 LRARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGL-PVDPDAPLFGFVGRLTEQKGVDLILD 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 795 AIYKTAELGGQFVLLGSSPVPHIQREFEgVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 874
Cdd:cd03791 315 ALPELLEEGGQLVVLGSGDPEYEQAFRE-LAERY--PGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRY 391
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 875 GSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDSPASQ 954
Cdd:cd03791 392 GTLPIVRRTGGLADTVFDYDPET---GEGTGFVFEDYDAEALLAALRRALALY-RNPELWRKLQKNAMKQDFSWDKSAKE 467

                ....*..
gi 34809050 955 YENLYQS 961
Cdd:cd03791 468 YLELYRS 474
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
477-962 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 596.30  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVLDVvIQSYFDGNLFSNNVWTGTV 556
Cdd:COG0297   1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSI-DDKLKDLEVVAS-LEVPLGGRTYYARVLEGPD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 557 EGLPVYFIEpqHPSkFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRG 631
Cdd:COG0297  79 DGVPVYFID--NPE-LFDRPGPYGDpdrdyPDNAERFAFFSRAALELLKGLDWKPDIIHCHDWQTGLIPALLKTRYADDP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 632 FSSARICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRG 710
Cdd:COG0297 156 FKRIKTVFTIHNLAYQGIFPAEILELLGLP-PELFTPDGLEF--YGQINFLKAGIVYADRVTTVSPTYAREIQTpEFGEG 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 711 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLH 790
Cdd:COG0297 233 LDGLLRARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGL-PVDPDAPLIGMVSRLTEQKGLD 311
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 791 LIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 870
Cdd:COG0297 312 LLLEALDELLEEDVQLVVLGSGD-PEYEEAFRELAARY--PGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMY 388
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 871 AMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDS 950
Cdd:COG0297 389 ALRYGTVPIVRRTGGLADTVIDYNEAT---GEGTGFVFDEYTAEALLAAIRRALALY-RDPEAWRKLQRNAMKQDFSWEK 464
                       490
                ....*....|..
gi 34809050 951 PASQYENLYQSA 962
Cdd:COG0297 465 SAKEYLELYREL 476
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
479-716 1.73e-77

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 253.02  E-value: 1.73e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   479 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 558
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGVPVRPLTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   559 LPVYFIEPQHpskFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 633
Cdd:pfam08323  81 VDVYFLDNPD---YFDRPGLYGDdgrdyEDNAERFAFFSRAALELAKKLGWIPDIIHCHDWHTALVPAYLKEAYADDPFK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   634 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDrPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRGLQ 712
Cdd:pfam08323 158 NIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN-LDGLEF--YGQINFLKAGIVYADAVTTVSPTYAEEIQTpEFGGGLD 234

                  ....
gi 34809050   713 DTLK 716
Cdd:pfam08323 235 GLLR 238
 
Name Accession Description Interval E-value
PLN02939 PLN02939
transferase, transferring glycosyl groups
10-972 0e+00

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 1828.37  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   10 EYSALLSLSCGPI---------TRRRFAVSCRARPPgNLSAQQKKKRGKNIAPKQRSSNAKLLLTTEENGQLPSTSLRTS 80
Cdd:PLN02939   5 ESAALLSHGCGPIrsrapfylpSRRRLAVSCRARRR-GFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTV 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   81 MERPQKSTSSEDDTNGAISQIDEKIAAIGNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILT 160
Cdd:PLN02939  84 MELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILT 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  161 EKEALQKKVDTLEMNLSKA-----LATKGNINTDIPGDHLEKFTKEILIESALSGGnpahlCESPLFMELTVLKEENMLL 235
Cdd:PLN02939 164 EKEALQGKINILEMRLSETdarikLAAQEKIHVEILEEQLEKLRNELLIRGATEGL-----CVHSLSKELDVLKEENMLL 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  236 KADAQFLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEK 315
Cdd:PLN02939 239 KDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  316 YAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAAKSHHQAGHQETNTHIQVYQQLTEEFQDNLGKLIEE 395
Cdd:PLN02939 319 AALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEE 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  396 SGR--LEHSANSMPSEFWSHILLMIDGWFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLSLSGN 473
Cdd:PLN02939 399 SKKrsLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGT 478
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  474 SSGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWT 553
Cdd:PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  554 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 633
Cdd:PLN02939 559 GTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFN 638
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  634 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQD 713
Cdd:PLN02939 639 SARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQD 718
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  714 TLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLVACITRLVPQKGLHLIR 793
Cdd:PLN02939 719 TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIR 798
                        810       820       830       840       850       860       870       880
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  794 HAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:PLN02939 799 HAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMR 878
                        890       900       910       920       930       940       950       960
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  874 YGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPAS 953
Cdd:PLN02939 879 YGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSAS 958
                        970
                 ....*....|....*....
gi 34809050  954 QYENLYQSAVAQARGAAQT 972
Cdd:PLN02939 959 QYEELYQRAVARARAAANR 977
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
477-962 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 605.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFsNNVWTGTV 556
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLY-VKVFEGVV 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   557 EGLPVYFIEPQHpskFFWR-AQYYGE--HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYatrGFS 633
Cdd:TIGR02095  80 EGVPVYFIDNPS---LFDRpGGIYGDdyPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVY---RPN 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   634 SARICFTCHNFEYQGTAPAPDLSYCGLDveqldrPDRMQDNA---HGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGR 709
Cdd:TIGR02095 154 PIKTVFTIHNLAYQGVFPADDFSELGLP------PEYFHMEGlefYGRVNFLKGGIVYADRVTTVSPTYAREILtPEFGY 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   710 GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGL 789
Cdd:TIGR02095 228 GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL-PVDDDVPLFGVISRLTQQKGV 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   790 HLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqFQKNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQM 869
Cdd:TIGR02095 307 DLLLAALPELLELGGQLVVLGTGD-PELEEALRELA--ERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQL 383
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   870 IAMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWD 949
Cdd:TIGR02095 384 YAMRYGTVPIVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAMSQDFSWD 460
                         490
                  ....*....|...
gi 34809050   950 SPASQYENLYQSA 962
Cdd:TIGR02095 461 KSAKQYVELYRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
478-961 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 597.62  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 478 HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIqsYFDGNLFSNNVWTGTVE 557
Cdd:cd03791   1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEV--KVGGRGEEVGVFELPVD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 558 GLPVYFIEPQHPSKFFWR--AQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSA 635
Cdd:cd03791  79 GVDYYFLDNPEFFDRPGLpgPPGYDYPDNAERFAFFSRAALELLRRLGFQPDIIHANDWHTALVPAYLKTRYRGPGFKKI 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 636 RICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEV-RSEGGRGLQDT 714
Cdd:cd03791 159 KTVFTIHNLAYQGLFPLDTLAELGLP-PELFHIDGLEF--YGQINFLKAGIVYADRVTTVSPTYAKEIlTPEYGEGLDGV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 715 LKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLHLIRH 794
Cdd:cd03791 236 LRARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGL-PVDPDAPLFGFVGRLTEQKGVDLILD 314
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 795 AIYKTAELGGQFVLLGSSPVPHIQREFEgVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRY 874
Cdd:cd03791 315 ALPELLEEGGQLVVLGSGDPEYEQAFRE-LAERY--PGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRY 391
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 875 GSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDSPASQ 954
Cdd:cd03791 392 GTLPIVRRTGGLADTVFDYDPET---GEGTGFVFEDYDAEALLAALRRALALY-RNPELWRKLQKNAMKQDFSWDKSAKE 467

                ....*..
gi 34809050 955 YENLYQS 961
Cdd:cd03791 468 YLELYRS 474
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
477-962 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 596.30  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVLDVvIQSYFDGNLFSNNVWTGTV 556
Cdd:COG0297   1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSI-DDKLKDLEVVAS-LEVPLGGRTYYARVLEGPD 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 557 EGLPVYFIEpqHPSkFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRG 631
Cdd:COG0297  79 DGVPVYFID--NPE-LFDRPGPYGDpdrdyPDNAERFAFFSRAALELLKGLDWKPDIIHCHDWQTGLIPALLKTRYADDP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 632 FSSARICFTCHNFEYQGTAPAPDLSYCGLDvEQLDRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRG 710
Cdd:COG0297 156 FKRIKTVFTIHNLAYQGIFPAEILELLGLP-PELFTPDGLEF--YGQINFLKAGIVYADRVTTVSPTYAREIQTpEFGEG 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 711 LQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLySEDASQPLVACITRLVPQKGLH 790
Cdd:COG0297 233 LDGLLRARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGL-PVDPDAPLIGMVSRLTEQKGLD 311
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 791 LIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMI 870
Cdd:COG0297 312 LLLEALDELLEEDVQLVVLGSGD-PEYEEAFRELAARY--PGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMY 388
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 871 AMRYGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYsRKPMVWKQLVQKDMQIDFSWDS 950
Cdd:COG0297 389 ALRYGTVPIVRRTGGLADTVIDYNEAT---GEGTGFVFDEYTAEALLAAIRRALALY-RDPEAWRKLQRNAMKQDFSWEK 464
                       490
                ....*....|..
gi 34809050 951 PASQYENLYQSA 962
Cdd:COG0297 465 SAKEYLELYREL 476
glgA PRK00654
glycogen synthase GlgA;
477-965 0e+00

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 594.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMqLDQITNLKVldvviqsyfDGNLFSNNVWTGTV 556
Cdd:PRK00654   1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAI-REKLRDAQV---------VGRLDLFTVLFGHL 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  557 E--GLPVYFIEPQHpskFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYAtRGFSS 634
Cdd:PRK00654  71 EgdGVPVYLIDAPH---LFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYW-RGYPD 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  635 ARICFTCHNFEYQGTAPAPDLSYCGLDVEQLdRPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVR-SEGGRGLQD 713
Cdd:PRK00654 147 IKTVFTIHNLAYQGLFPAEILGELGLPAEAF-HLEGLEF--YGQISFLKAGLYYADRVTTVSPTYAREITtPEFGYGLEG 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  714 TLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDAsqPLVACITRLVPQKGLHLIR 793
Cdd:PRK00654 224 LLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDA--PLFAMVSRLTEQKGLDLVL 301
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  794 HAIYKTAELGGQFVLLGSsPVPHIQREFEGVADQFqkNNNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:PRK00654 302 EALPELLEQGGQLVLLGT-GDPELEEAFRALAARY--PGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALR 378
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  874 YGSVPIVRQTGGLCDSVFDFDDETipvELRNGFTFARTDEQDLSSCLERAFSYYSRKPmVWKQLVQKDMQIDFSWDSPAS 953
Cdd:PRK00654 379 YGTLPIVRRTGGLADTVIDYNPED---GEATGFVFDDFNAEDLLRALRRALELYRQPP-LWRALQRQAMAQDFSWDKSAE 454
                        490
                 ....*....|..
gi 34809050  954 QYENLYQSAVAQ 965
Cdd:PRK00654 455 EYLELYRRLLGK 466
PLN02316 PLN02316
synthase/transferase
477-962 4.69e-148

synthase/transferase


Pssm-ID: 215180 [Multi-domain]  Cd Length: 1036  Bit Score: 466.27  E-value: 4.69e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   477 LHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLdvviQSYFDGNLfSNNVWTGTV 556
Cdd:PLN02316  588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQ----RSYSWGGT-EIKVWFGKV 662
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   557 EGLPVYFIEPQhpSKFFWRAQYYGEHDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSAR 636
Cdd:PLN02316  663 EGLSVYFLEPQ--NGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR 740
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   637 ICFTCHNFEYqgtapapdlsycgldveqldrpdrmqdnahGRINVAKGgIVYSNIVTTVSPTYALEVRSEGgrglqdTLK 716
Cdd:PLN02316  741 VVFTIHNLEF------------------------------GANHIGKA-MAYADKATTVSPTYSREVSGNS------AIA 783
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   717 MHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATD-LQGKAANKAFLRKQLGLYSEDAsqPLVACITRLVPQKGLHLIRHA 795
Cdd:PLN02316  784 PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENvVEGKRAAKEALQQRLGLKQADL--PLVGIITRLTHQKGIHLIKHA 861
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   796 IYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNN--IRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:PLN02316  862 IWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHdrARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMR 941
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   874 YGSVPIVRQTGGLCDSVFDFDDETIPVELR----NGFTFARTDEQDLSSCLERAFS--YYSRKpmvW-KQLVQKDMQIDF 946
Cdd:PLN02316  942 YGSIPVVRKTGGLFDTVFDVDHDKERAQAQglepNGFSFDGADAAGVDYALNRAISawYDGRD---WfNSLCKRVMEQDW 1018
                         490
                  ....*....|....*.
gi 34809050   947 SWDSPASQYENLYQSA 962
Cdd:PLN02316 1019 SWNRPALDYMELYHSA 1034
PRK14099 PRK14099
glycogen synthase GlgA;
475-967 2.36e-86

glycogen synthase GlgA;


Pssm-ID: 237610 [Multi-domain]  Cd Length: 485  Bit Score: 285.84  E-value: 2.36e-86
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  475 SGLHIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCM--QLDQITNLKVLDvviqSYFDGNlfsNNVW 552
Cdd:PRK14099   2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVlaGIEDAEQVHSFP----DLFGGP---ARLL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  553 TGTVEGLPVYFIEPQHpskFFWRA--QYYGEH-----DDFKRYSYFSRAALELLYQS--GKKIDIIHCHDWQTAFV-APL 622
Cdd:PRK14099  75 AARAGGLDLFVLDAPH---LYDRPgnPYVGPDgkdwpDNAQRFAALARAAAAIGQGLvpGFVPDIVHAHDWQAGLApAYL 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  623 YWDiyatrGFSSARICFTCHNFEYQGTAPAPDLSYCGL-----DVEQLDRpdrmqdnaHGRINVAKGGIVYSNIVTTVSP 697
Cdd:PRK14099 152 HYS-----GRPAPGTVFTIHNLAFQGQFPRELLGALGLppsafSLDGVEY--------YGGIGYLKAGLQLADRITTVSP 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  698 TYALEVRS-EGGRGLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASqPL 776
Cdd:PRK14099 219 TYALEIQGpEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDA-LL 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  777 VACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPvPHIQREFEGVAdqfQKN-NNIRLILKYDEALSHCIYAASDMF 855
Cdd:PRK14099 298 LGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGD-AELEARFRAAA---QAYpGQIGVVIGYDEALAHLIQAGADAL 373
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  856 IIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDETIPVELRNGFTFARTDEQDLSSCLERAFSYYSrKPMVWK 935
Cdd:PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFA-DPVAWR 452
                        490       500       510
                 ....*....|....*....|....*....|..
gi 34809050  936 QLVQKDMQIDFSWDSPASQYENLYQSAVAQAR 967
Cdd:PRK14099 453 RLQRNGMTTDVSWRNPAQHYAALYRSLVAERR 484
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
479-716 1.73e-77

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 253.02  E-value: 1.73e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   479 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVVIQSYFDGNLFSNNVWTGTVEG 558
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGVPVRPLTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   559 LPVYFIEPQHpskFFWRAQYYGE-----HDDFKRYSYFSRAALELLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFS 633
Cdd:pfam08323  81 VDVYFLDNPD---YFDRPGLYGDdgrdyEDNAERFAFFSRAALELAKKLGWIPDIIHCHDWHTALVPAYLKEAYADDPFK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   634 SARICFTCHNFEYQGTAPAPDLSYCGLDVEQLDrPDRMQDnaHGRINVAKGGIVYSNIVTTVSPTYALEVRS-EGGRGLQ 712
Cdd:pfam08323 158 NIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFN-LDGLEF--YGQINFLKAGIVYADAVTTVSPTYAEEIQTpEFGGGLD 234

                  ....
gi 34809050   713 DTLK 716
Cdd:pfam08323 235 GLLR 238
PRK14098 PRK14098
starch synthase;
479-960 4.42e-68

starch synthase;


Pssm-ID: 172588 [Multi-domain]  Cd Length: 489  Bit Score: 235.78  E-value: 4.42e-68
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  479 IVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKY-----------DCMQLDQI-TNLK----VLDVV----- 537
Cdd:PRK14098   8 VLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYgtindrkfrlhDVLRLSDIeVPLKektdLLHVKvtalp 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  538 ---IQSYFDGN--LFSNNVWtgtveglpvyFIEPQHpskffwraqyygeHDDFK----RYSYFSRAALELLYQSGKKIDI 608
Cdd:PRK14098  88 sskIQTYFLYNekYFKRNGL----------FTDMSL-------------GGDLKgsaeKVIFFNVGVLETLQRLGWKPDI 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  609 IHCHDWQTAFVAPLYWDIYATRGF-SSARICFTCHNFEYQGTAPapdlsycgLDVEQLDRPDRMQDNAH---GRINVAKG 684
Cdd:PRK14098 145 IHCHDWYAGLVPLLLKTVYADHEFfKDIKTVLTIHNVYRQGVLP--------FKVFQKLLPEEVCSGLHregDEVNMLYT 216
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  685 GIVYSNIVTTVSPTYALEVRSEGGR--GLQDTLKMHSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLR 762
Cdd:PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEafGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  763 KQLGLySEDASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSpvphiQREFEGVADQFQKNNNIRLILKYD- 841
Cdd:PRK14098 297 EEVGL-PFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSG-----DKEYEKRFQDFAEEHPEQVSVQTEf 370
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  842 -EALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDetipvELRNGFTFARTDEQDLSSCL 920
Cdd:PRK14098 371 tDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSE-----DKGSGFIFHDYTPEALVAKL 445
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|
gi 34809050  921 ERAFSYYSRKPMvWKQLVQKDMQIDFSWDSPASQYENLYQ 960
Cdd:PRK14098 446 GEALALYHDEER-WEELVLEAMERDFSWKNSAEEYAQLYR 484
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
478-960 1.82e-17

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 85.28  E-value: 1.82e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 478 HIVHIAAEMAPVakVGGLADVVAGLGKALQTKGHLVEIVLPkydcmqldqitnlkvldvviqsyfdgnlfsnnvwtGTVE 557
Cdd:cd03801   1 KILLLSPELPPP--VGGAERHVRELARALAARGHDVTVLTP-----------------------------------ADPG 43
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 558 GLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAAlellyqsgkKIDIIHCHDWQTAFVAPLYWdiyatrGFSSARI 637
Cdd:cd03801  44 EPPEELEDGVIVPLLPSLAALLRARRLLRELRPLLRLR---------KFDVVHAHGLLAALLAALLA------LLLGAPL 108
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 638 CFTCHNFEYQGTAPAPDLSYcgldvEQLDRPDRMQDNAHGRInvakggivysnivtTVSPTYALEVRSEGGRglqdtlkm 717
Cdd:cd03801 109 VVTLHGAEPGRLLLLLAAER-----RLLARAEALLRRADAVI--------------AVSEALRDELRALGGI-------- 161
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 718 HSRKFVGILNGIDTGTWNPstdrflavqysatdlqgkaankaFLRKQLGLyseDASQPLVACITRLVPQKGLHLIRHAIY 797
Cdd:cd03801 162 PPEKIVVIPNGVDLERFSP-----------------------PLRRKLGI---PPDRPVLLFVGRLSPRKGVDLLLEALA 215
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 798 KTAELGG--QFVLLGSSP--VPHIQREFEGVADqfqknnNIRLILKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMR 873
Cdd:cd03801 216 KLLRRGPdvRLVIVGGDGplRAELEELELGLGD------RVRFLGFVPDEELPALYAAADVFVLPSRYEGFGLVVLEAMA 289
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 874 YGSVPIVRQTGGLCDSVfdfDDETipvelrNGFTFARTDEQDLSSCLERAFSYysrkPMVWKQLVQ---KDMQIDFSWDS 950
Cdd:cd03801 290 AGLPVVATDVGGLPEVV---EDGE------GGLVVPPDDVEALADALLRLLAD----PELRARLGRaarERVAERFSWER 356
                       490
                ....*....|
gi 34809050 951 PASQYENLYQ 960
Cdd:cd03801 357 VAERLLDLYR 366
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
828-964 5.91e-10

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 57.69  E-value: 5.91e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 828 FQKNNNIRLILkydEALshciYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDdetipvelrNGFT 907
Cdd:COG0438   4 LVPRKGLDLLL---EAL----LAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDGE---------TGLL 67
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 908 FARTDEQDLSSCLERAFSYYSRkpmvWKQLVQ---KDMQIDFSWDSPASQYENLYQSAVA 964
Cdd:COG0438  68 VPPGDPEALAEAILRLLEDPEL----RRRLGEaarERAEERFSWEAIAERLLALYEELLA 123
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
761-957 7.86e-10

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 61.87  E-value: 7.86e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 761 LRKQLGLyseDASQPLVACITRLVPQKGLH-LIRhAIYKTAELGGQFVLL---GSSPVPHIQREFEgvADQFQKNNniRL 836
Cdd:cd03800 210 RRARLLL---PPDKPVVLALGRLDPRKGIDtLVR-AFAQLPELRELANLVlvgGPSDDPLSMDREE--LAELAEEL--GL 281
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 837 ILKYD-------EALSHcIYAASDMFIIPSMFEPCGLTQMIAMRYGsVPIV-RQTGGLCDSVfdfddetipVELRNGFTF 908
Cdd:cd03800 282 IDRVRfpgrvsrDDLPE-LYRAADVFVVPSLYEPFGLTAIEAMACG-TPVVaTAVGGLQDIV---------RDGRTGLLV 350
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
gi 34809050 909 ARTDEQDLSSCLERAFsyysRKPMVWKQLvqKDMQID-----FSWDSPASQYEN 957
Cdd:cd03800 351 DPHDPEALAAALRRLL----DDPALWQRL--SRAGLErarahYTWESVADQLLT 398
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
775-922 1.98e-09

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 56.75  E-value: 1.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   775 PLVACITRLVP-QKGLHLIRHAIY--KTAELGGQFVLLGSSPVPHIQREFEGVADqfqknnNIRLiLKYDEALSHcIYAA 851
Cdd:pfam13692   2 PVILFVGRLHPnVKGVDYLLEAVPllRKRDNDVRLVIVGDGPEEELEELAAGLED------RVIF-TGFVEDLAE-LLAA 73
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 34809050   852 SDMFIIPSMFEPCGLTQMIAMRYGsVPIV-RQTGGLCDSVFDfddetipvelRNGFTFARTDEQDLSSCLER 922
Cdd:pfam13692  74 ADVFVLPSLYEGFGLKLLEAMAAG-LPVVaTDVGGIPELVDG----------ENGLLVPPGDPEALAEAILR 134
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
774-930 2.12e-09

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 57.28  E-value: 2.12e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   774 QPLVACITRLVPQKGLHLIRHAIYKTAELGGQFVLL--GSSPVphiQREFEGVADQFQKNNNIRLIL-KYDEALSHCiYA 850
Cdd:pfam00534   2 KKIILFVGRLEPEKGLDLLIKAFALLKEKNPNLKLViaGDGEE---EKRLKKLAEKLGLGDNVIFLGfVSDEDLPEL-LK 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   851 ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDdetipvelrNGFTFARTDEQDLSSCLERA------- 923
Cdd:pfam00534  78 IADVFVLPSRYEGFGIVLLEAMACGLPVIASDVGGPPEVVKDGE---------TGFLVKPNNAEALAEAIDKLledeelr 148

                  ....*....
gi 34809050   924 --FSYYSRK 930
Cdd:pfam00534 149 erLGENARK 157
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
779-892 3.51e-08

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 55.49  E-value: 3.51e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 779 CITRLVPQKGLHLIRHAI--YKTAELGGQFVLLGSSPVPhiQREFEGVADQFQKNNNIRLILKYDEALSHCIYAASDMFI 856
Cdd:cd01635 115 SVGRLVPEKGIDLLLEALalLKARLPDLVLVLVGGGGER--EEEEALAAALGLLERVVIIGGLVDDEVLELLLAAADVFV 192
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 34809050 857 IPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFD 892
Cdd:cd01635 193 LPSRSEGFGLVLLEAMAAGKPVIATDVGGIPEFVVD 228
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
725-961 1.04e-05

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 48.87  E-value: 1.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 725 ILNGIDTGTWNPstdrflavqysatdlqgkaANKAFLRKQLGLySEDAsqPLVACITRLV--PQKGLH-LIR--HAIYKT 799
Cdd:cd03825 166 IPNGIDTEIFAP-------------------VDKAKARKRLGI-PQDK--KVILFGAESVtkPRKGFDeLIEalKLLATK 223
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 800 AELGGQFV-----LLGSSPVPHIQREFEgvadqfqkNNNIRLILkydealshcIYAASDMFIIPSMFEPCGLTQMIAMRY 874
Cdd:cd03825 224 DDLLLVVFgkndpQIVILPFDIISLGYI--------DDDEQLVD---------IYSAADLFVHPSLADNLPNTLLEAMAC 286
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 875 GSVPIVRQTGGLCDSVFDfddetipveLRNGFTFARTDEQDLSS----CLERAFSYYSRkpmvwKQLVQKDMQIDFSWDS 950
Cdd:cd03825 287 GTPVVAFDTGGSPEIVQH---------GVTGYLVPPGDVQALAEaiewLLANPKERESL-----GERARALAENHFDQRV 352
                       250
                ....*....|.
gi 34809050 951 PASQYENLYQS 961
Cdd:cd03825 353 QAQRYLELYKD 363
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
771-959 3.74e-05

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 46.94  E-value: 3.74e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 771 DASQPLVAC-ITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVpHIQREFEGVAdqfqknnNIRLI--LKYDEALSHc 847
Cdd:cd03823 187 PGTERLRFGyIGRLTEEKGIDLLVEAFKRLPREDIELVIAGHGPL-SDERQIEGGR-------RIAFLgrVPTDDIKDF- 257
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 848 iYAASDMFIIPSMF-EPCGLTQMIAMRYGSVPIVRQTGGLCDSVfdfddetipVELRNGFTFARTDEQDLSSCLERAfsy 926
Cdd:cd03823 258 -YEKIDVLVVPSIWpEPFGLVVREAIAAGLPVIASDLGGIAELI---------QPGVNGLLFAPGDAEDLAAAMRRL--- 324
                       170       180       190
                ....*....|....*....|....*....|...
gi 34809050 927 ySRKPMVWKQLvQKDMQIDFSWDSPASQYENLY 959
Cdd:cd03823 325 -LTDPALLERL-RAGAEPPRSTESQAEEYLKLY 355
GT4-like cd03814
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ...
693-890 7.81e-05

glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340842 [Multi-domain]  Cd Length: 365  Bit Score: 46.13  E-value: 7.81e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 693 TTVSPTYALEVRSEGgRGLQDtlkmhsrkfVGILN-GIDTGTWNPStdrflavqysatdlqgkAANKAFLRKQLglyseD 771
Cdd:cd03814 148 TTLVPSPSIARELEG-HGFER---------VRLWPrGVDTELFHPS-----------------RRDAALRRRLG-----P 195
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 772 ASQPLVACITRLVPQKGLHLIRHAIYK-TAELGGQFVLLGSSPvphiQREfegvADQFQKNNNIRLILKYDEALSHcIYA 850
Cdd:cd03814 196 PGRPLLLYVGRLAPEKNLEALLDADLPlAASPPVRLVVVGDGP----ARA----ELEARGPDVIFTGFLTGEELAR-AYA 266
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 34809050 851 ASDMFIIPSMFEPCGLTQMIAMRYGsVP-IVRQTGGLCDSV 890
Cdd:cd03814 267 SADVFVFPSRTETFGLVVLEAMASG-LPvVAADAGGPRDIV 306
PRK02224 PRK02224
DNA double-strand break repair Rad50 ATPase;
54-339 3.10e-04

DNA double-strand break repair Rad50 ATPase;


Pssm-ID: 179385 [Multi-domain]  Cd Length: 880  Bit Score: 44.65  E-value: 3.10e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   54 KQRSSNAKLLLTTEENGQLPSTS-LRTSMERpQKSTSSEDDTNG---AISQIDEKIAAIgNEQQERSKDKHFESDFQLED 129
Cdd:PRK02224 168 RERASDARLGVERVLSDQRGSLDqLKAQIEE-KEEKDLHERLNGlesELAELDEEIERY-EEQREQARETRDEADEVLEE 245
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  130 FGEMIQNMEKnillLNQARLQAIEDVDKILTEKEALQKKV-------DTLEMNLSKALATKGNINTDIPG--DHLEKFTK 200
Cdd:PRK02224 246 HEERREELET----LEAEIEDLRETIAETEREREELAEEVrdlrerlEELEEERDDLLAEAGLDDADAEAveARREELED 321
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  201 EI------LIESALSGGNPAHLCESpLFMELTVLKEENMLLKADAQFLKAKIvefAETEEFLFKLEKERSLLDATVRELE 274
Cdd:PRK02224 322 RDeelrdrLEECRVAAQAHNEEAES-LREDADDLEERAEELREEAAELESEL---EEAREAVEDRREEIEELEEEIEELR 397
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 34809050  275 ARFLVAQTDiwkvvplqydvwmekvenlqhmLGCLKNHVEkyaALLDQHDDLHDKIDELEASLKE 339
Cdd:PRK02224 398 ERFGDAPVD----------------------LGNAEDFLE---ELREERDELREREAELEATLRT 437
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
493-731 3.87e-04

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 42.13  E-value: 3.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   493 GGLADVVAGLGKALQTKGHLVEIVLPKYDcmqldqitnlkvldvviqsyfdgNLFSNNVWTGTVEGLPVYFIEPqhpskf 572
Cdd:pfam13439   1 GGVERYVLELARALARRGHEVTVVTPGGP-----------------------GPLAEEVVRVVRVPRVPLPLPP------ 51
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050   573 fwraqyygehdDFKRYSYFSRAALELLyqSGKKIDIIHCHDWqtafvAPLYWDIYATRGFSSARICFTCHNFEYQGTAPA 652
Cdd:pfam13439  52 -----------RLLRSLAFLRRLRRLL--RRERPDVVHAHSP-----FPLGLAALAARLRLGIPLVVTYHGLFPDYKRLG 113
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 34809050   653 PDLSYCGLDVEQLDRpdRMQDNAHGrinvakggivysniVTTVSPTyaleVRSEggrgLQDTLKMHSRKFVGILNGIDT 731
Cdd:pfam13439 114 ARLSPLRRLLRRLER--RLLRRADR--------------VIAVSEA----VADE----LRRLYGVPPEKIRVIPNGVDL 168
GT4_WfcD-like cd03795
Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most ...
691-880 8.87e-04

Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340826 [Multi-domain]  Cd Length: 355  Bit Score: 42.65  E-value: 8.87e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 691 IVTTvSPTYALEvrSEggrglqdTLKMHSRKFVGILNGIDtgtwnpstdrflAVQYSATDLQGKAANKAFLRKQLGLYse 770
Cdd:cd03795 141 IIAT-SPNYVET--SP-------TLREFKNKVRVIPLGID------------KNVYNIPRVDFENIKREKKGKKIFLF-- 196
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 771 dasqplvacITRLVPQKGLH-LIRHAIYKTAELggqfVLLGSSPvphIQREFEGVADQfQKNNNIRLILKYDEALSHCIY 849
Cdd:cd03795 197 ---------IGRLVYYKGLDyLIEAAQYLNYPI----VIGGEGP---LKPDLEAQIEL-NLLDNVKFLGRVDDEEKVIYL 259
                       170       180       190
                ....*....|....*....|....*....|...
gi 34809050 850 AASDMFIIPSMF--EPCGLTQMIAMRYGsVPIV 880
Cdd:cd03795 260 HLCDVFVFPSVLrsEAFGIVLLEAMMCG-KPVI 291
GT4_BshA-like cd04962
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most ...
848-960 1.21e-03

N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.


Pssm-ID: 340859 [Multi-domain]  Cd Length: 370  Bit Score: 42.34  E-value: 1.21e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 848 IYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGlcdsvfdfddetIPVELRNGFTFARTDEQDLSSCLERAFSYY 927
Cdd:cd04962 266 LLSIADLFLLPSEKESFGLAALEAMACGVPVVSSNAGG------------IPEVVKHGETGFLSDVGDVDAMAKSALSIL 333
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 34809050 928 sRKPMVWKQLVQ---KDMQIDFSWDSPASQYENLYQ 960
Cdd:cd04962 334 -EDDELYNRMGRaarKRAAERFDPERIVPQYEAYYR 368
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
126-400 2.05e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 41.97  E-value: 2.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  126 QLEDFGEMIQNMEKNILLLNqARLQAIEdvdKILTEKEALQKKVDTLEMNLSKALATKGNINTDIP--GDHLEKFTKEIL 203
Cdd:PRK03918 156 GLDDYENAYKNLGEVIKEIK-RRIERLE---KFIKRTENIEELIKEKEKELEEVLREINEISSELPelREELEKLEKEVK 231
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  204 -IESalsggnpahlcespLFMELTVLKEENMLLKADAQFLKAKIVefaETEEFLFKLEKERSLLDATVRELE-------- 274
Cdd:PRK03918 232 eLEE--------------LKEEIEELEKELESLEGSKRKLEEKIR---ELEERIEELKKEIEELEEKVKELKelkekaee 294
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  275 ----ARFLVAQTDIWKVVPLQYDVWMEKVENLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLK------------ 338
Cdd:PRK03918 295 yiklSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHElyeeakakkeel 374
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 34809050  339 EGKTSEFSPYVVELLQQKLKAAKSHHqaghqetnthiqvyqqltEEFQDNLGKLIEESGRLE 400
Cdd:PRK03918 375 ERLKKRLTGLTPEKLEKELEELEKAK------------------EEIEEEISKITARIGELK 418
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
87-339 2.72e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 41.29  E-value: 2.72e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  87 STSSEDDTNGAISQIDEKIAAIgNEQQERSKDKHFESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQ 166
Cdd:COG4942  18 QADAAAEAEAELEQLQQEIAEL-EKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 167 KKVDTLEMNLSKALATkgnintdipgdhLEKFTKEILIESALSGGNPAHlcespLFMELTVLKEENMLLKADAQFLKAKI 246
Cdd:COG4942  97 AELEAQKEELAELLRA------------LYRLGRQPPLALLLSPEDFLD-----AVRRLQYLKYLAPARREQAEELRADL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 247 VEFAETEEflfKLEKERSLLDATVRELEARFLVAQTDIwkvvplqydvwMEKVENLQHMLGCLKNHVEKYAALLDQHDDL 326
Cdd:COG4942 160 AELAALRA---ELEAERAELEALLAELEEERAALEALK-----------AERQKLLARLEKELAELAAELAELQQEAEEL 225
                       250
                ....*....|...
gi 34809050 327 HDKIDELEASLKE 339
Cdd:COG4942 226 EALIARLEAEAAA 238
PRK03918 PRK03918
DNA double-strand break repair ATPase Rad50;
131-362 5.00e-03

DNA double-strand break repair ATPase Rad50;


Pssm-ID: 235175 [Multi-domain]  Cd Length: 880  Bit Score: 40.82  E-value: 5.00e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  131 GEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKALATKGN-------INTDIPGDHLEKFTKEIL 203
Cdd:PRK03918 383 GLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgreLTEEHRKELLEEYTAELK 462
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  204 ----------------------IESALSGgnpahlcESPLFMELTVLKE----ENMLLKADAQFLKAKIVEFAETEEFLF 257
Cdd:PRK03918 463 riekelkeieekerklrkelreLEKVLKK-------ESELIKLKELAEQlkelEEKLKKYNLEELEKKAEEYEKLKEKLI 535
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050  258 KLEKERSLLDATVRELEARflvaqtdIWKVVPLQydvwmEKVENLQHMLGCLKNHVEKYAalLDQHDDLHDKIDELEASL 337
Cdd:PRK03918 536 KLKGEIKSLKKELEKLEEL-------KKKLAELE-----KKLDELEEELAELLKELEELG--FESVEELEERLKELEPFY 601
                        250       260
                 ....*....|....*....|....*
gi 34809050  338 KEGKTSEFSPYVVELLQQKLKAAKS 362
Cdd:PRK03918 602 NEYLELKDAEKELEREEKELKKLEE 626
GT4_WbnK-like cd03807
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ...
692-880 5.39e-03

Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.


Pssm-ID: 340836 [Multi-domain]  Cd Length: 362  Bit Score: 40.38  E-value: 5.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 692 VTTVSPTYALEVRSEGGRglqdtlkmhSRKFVGILNGIDTGTWNPStdrflavqysatdlqgkAANKAFLRKQLGLyseD 771
Cdd:cd03807 137 TVANSSAVAEFHQEQGYA---------KNKIVVIYNGIDLFKLSPD-----------------DASRARARRRLGL---A 187
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050 772 ASQPLVACITRLVPQKGLHLIRHAIYKTAELGGQ--FVLLGSSPV-PHIQREFE--GVADQFqknnnirLILKYDEALSH 846
Cdd:cd03807 188 EDRRVIGIVGRLHPVKDHSDLLRAAALLVETHPDlrLLLVGRGPErPNLERLLLelGLEDRV-------HLLGERSDVPA 260
                       170       180       190
                ....*....|....*....|....*....|....
gi 34809050 847 CiYAASDMFIIPSMFEPCGLTQMIAMRYGsVPIV 880
Cdd:cd03807 261 L-LPAMDIFVLSSRTEGFPNALLEAMACG-LPVV 292
DUF3584 pfam12128
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
92-277 5.98e-03

Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.


Pssm-ID: 432349 [Multi-domain]  Cd Length: 1191  Bit Score: 40.59  E-value: 5.98e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050     92 DDTNGAISQIDEKIAAiGNEQQERSKDKHFEsdFQLEDFGEMIQNMEKniLLLNQARLQAIEDVDKILTEK-EALQKKVD 170
Cdd:pfam12128  304 DELNGELSAADAAVAK-DRSELEALEDQHGA--FLDADIETAAADQEQ--LPSWQSELENLEERLKALTGKhQDVTAKYN 378
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 34809050    171 TLEMNLSKALATK-GNINTDIPGDHLEKFTKEILIESALSGgnpahlCESPLFMEL----TVLKEENMLLKADAQFLKAK 245
Cdd:pfam12128  379 RRRSKIKEQNNRDiAGIKDKLAKIREARDRQLAVAEDDLQA------LESELREQLeagkLEFNEEEYRLKSRLGELKLR 452
                          170       180       190
                   ....*....|....*....|....*....|..
gi 34809050    246 IVEFAETEEFLFKLEKERSLLDATVRELEARF 277
Cdd:pfam12128  453 LNQATATPELLLQLENFDERIERAREEQEAAN 484
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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