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Conserved domains on  [gi|28392972|gb|AAO41921|]
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unknown protein [Arabidopsis thaliana]

Protein Classification

DUF760 domain-containing protein( domain architecture ID 10527645)

DUF760 domain-containing protein similar to Arabidopsis thaliana chloroplastic UV-B-induced protein At3g17800

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF760 pfam05542
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 162-240 1.72e-16

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


:

Pssm-ID: 461674  Cd Length: 83  Bit Score: 73.27  E-value: 1.72e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 28392972   162 EISPSKDWELESIHSFDVLELIKEHSNAVISLRVNSSltdDCATTEIDKNRLSKVYTASVLYGYFLKSASLRHQLECSL 240
Cdd:pfam05542   8 SLKPEEVAALSKPASPEVLEAMKQHVSGLLGLLPSDQ---FEVTITTSRENLAQLLASSMMTGYFLRNAEQRLELERSL 83
DUF760 super family cl09377
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 254-321 4.61e-03

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


The actual alignment was detected with superfamily member pfam05542:

Pssm-ID: 471877  Cd Length: 83  Bit Score: 35.52  E-value: 4.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28392972   254 YISEFDPKILRRCAKPRSHEAKSLIEKQSLALFG--PEESSKESIVTSFSSLKRLLLEAVAFGTFLWDTE 321
Cdd:pfam05542   5 YIQSLKPEEVAALSKPASPEVLEAMKQHVSGLLGllPSDQFEVTITTSRENLAQLLASSMMTGYFLRNAE 74
 
Name Accession Description Interval E-value
DUF760 pfam05542
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 162-240 1.72e-16

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


Pssm-ID: 461674  Cd Length: 83  Bit Score: 73.27  E-value: 1.72e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 28392972   162 EISPSKDWELESIHSFDVLELIKEHSNAVISLRVNSSltdDCATTEIDKNRLSKVYTASVLYGYFLKSASLRHQLECSL 240
Cdd:pfam05542   8 SLKPEEVAALSKPASPEVLEAMKQHVSGLLGLLPSDQ---FEVTITTSRENLAQLLASSMMTGYFLRNAEQRLELERSL 83
DUF760 pfam05542
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 254-321 4.61e-03

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


Pssm-ID: 461674  Cd Length: 83  Bit Score: 35.52  E-value: 4.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28392972   254 YISEFDPKILRRCAKPRSHEAKSLIEKQSLALFG--PEESSKESIVTSFSSLKRLLLEAVAFGTFLWDTE 321
Cdd:pfam05542   5 YIQSLKPEEVAALSKPASPEVLEAMKQHVSGLLGllPSDQFEVTITTSRENLAQLLASSMMTGYFLRNAE 74
 
Name Accession Description Interval E-value
DUF760 pfam05542
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 162-240 1.72e-16

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


Pssm-ID: 461674  Cd Length: 83  Bit Score: 73.27  E-value: 1.72e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 28392972   162 EISPSKDWELESIHSFDVLELIKEHSNAVISLRVNSSltdDCATTEIDKNRLSKVYTASVLYGYFLKSASLRHQLECSL 240
Cdd:pfam05542   8 SLKPEEVAALSKPASPEVLEAMKQHVSGLLGLLPSDQ---FEVTITTSRENLAQLLASSMMTGYFLRNAEQRLELERSL 83
DUF760 pfam05542
Protein of unknown function (DUF760); This family contains several uncharacterized plant ...
 254-321 4.61e-03

Protein of unknown function (DUF760); This family contains several uncharacterized plant proteins.


Pssm-ID: 461674  Cd Length: 83  Bit Score: 35.52  E-value: 4.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 28392972   254 YISEFDPKILRRCAKPRSHEAKSLIEKQSLALFG--PEESSKESIVTSFSSLKRLLLEAVAFGTFLWDTE 321
Cdd:pfam05542   5 YIQSLKPEEVAALSKPASPEVLEAMKQHVSGLLGllPSDQFEVTITTSRENLAQLLASSMMTGYFLRNAE 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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