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Conserved domains on  [gi|20465963|gb|AAM20167|]
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putative beta-amylase [Arabidopsis thaliana]

Protein Classification

alpha-amylase family protein; alpha-amylase family glycosyl hydrolase( domain architecture ID 11476469)

alpha-amylase family protein may catalyze the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides| alpha-amylase family glycosyl hydrolase functions as a glycoside hydrolase that may act on starch, glycogen, and related oligo- and polysaccharides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00197 PLN00197
beta-amylase; Provisional
 1-575 0e+00

beta-amylase; Provisional


:

Pssm-ID: 215099 [Multi-domain]  Cd Length: 573  Bit Score: 1200.23  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963    1 MALNLSHQLGVLAGTPIKSGEMTDSSLLSISPPSARMMTPKAMNRNYKAHGTDPSPPMSPILGATRADLSVACKAFAVEN 80
Cdd:PLN00197   1 MAMNITHQIGALAGTPIKSGEITSTSTLSAKPPSPRMRCPKAMARNYEQKSQPTSPCMSPILGGMRADLSVACRAFATEN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   81 GIGTIEEQRTYREGGIGGKKEGGGGVPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGT 160
Cdd:PLN00197  81 DVVTIEEQREEREYRIGGTKEKGKGVPVYVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  161 YNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLK 240
Cdd:PLN00197 161 YNWGGYNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLK 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  241 GRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGK 320
Cdd:PLN00197 241 GRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAEAAGK 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  321 PEWGSTGPTDAGHYNNWPEDTQFFKKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHY 400
Cdd:PLN00197 321 PEWGSTGPTDAGHYNNWPEDTRFFKKEGGGWNSPYGEFFLSWYSQMLLDHGERILSSAKSIFENTGVKISVKIAGIHWHY 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENAL 480
Cdd:PLN00197 401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAEVPLAGENAL 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  481 PRYDDYAHEQILKASALNLDQNneGEPREMCAFTYLRMNPELFQADNWGKFVAFVKKMGEGRDSHRCREEVEREAEHFVH 560
Cdd:PLN00197 481 PRYDDYAHEQILQASSLNIDGN--SEDREMCAFTYLRMNPHLFQPDNWRRFVAFVKKMKEGKDSHRCREQVEREAEHFVH 558

                        570
                 ....*....|....*
gi 20465963  561 VTQPLVQEAAVALTH 575
Cdd:PLN00197 559 VTRPLVQEAAVALMH 573
 
Name Accession Description Interval E-value
PLN00197 PLN00197
beta-amylase; Provisional
 1-575 0e+00

beta-amylase; Provisional


Pssm-ID: 215099 [Multi-domain]  Cd Length: 573  Bit Score: 1200.23  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963    1 MALNLSHQLGVLAGTPIKSGEMTDSSLLSISPPSARMMTPKAMNRNYKAHGTDPSPPMSPILGATRADLSVACKAFAVEN 80
Cdd:PLN00197   1 MAMNITHQIGALAGTPIKSGEITSTSTLSAKPPSPRMRCPKAMARNYEQKSQPTSPCMSPILGGMRADLSVACRAFATEN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   81 GIGTIEEQRTYREGGIGGKKEGGGGVPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGT 160
Cdd:PLN00197  81 DVVTIEEQREEREYRIGGTKEKGKGVPVYVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  161 YNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLK 240
Cdd:PLN00197 161 YNWGGYNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLK 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  241 GRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGK 320
Cdd:PLN00197 241 GRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAEAAGK 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  321 PEWGSTGPTDAGHYNNWPEDTQFFKKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHY 400
Cdd:PLN00197 321 PEWGSTGPTDAGHYNNWPEDTRFFKKEGGGWNSPYGEFFLSWYSQMLLDHGERILSSAKSIFENTGVKISVKIAGIHWHY 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENAL 480
Cdd:PLN00197 401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAEVPLAGENAL 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  481 PRYDDYAHEQILKASALNLDQNneGEPREMCAFTYLRMNPELFQADNWGKFVAFVKKMGEGRDSHRCREEVEREAEHFVH 560
Cdd:PLN00197 481 PRYDDYAHEQILQASSLNIDGN--SEDREMCAFTYLRMNPHLFQPDNWRRFVAFVKKMKEGKDSHRCREQVEREAEHFVH 558

                        570
                 ....*....|....*
gi 20465963  561 VTQPLVQEAAVALTH 575
Cdd:PLN00197 559 VTRPLVQEAAVALMH 573
Glyco_hydro_14 pfam01373
Glycosyl hydrolase family 14; This family are beta amylases.
 109-534 1.90e-155

Glycosyl hydrolase family 14; This family are beta amylases.


Pssm-ID: 366599  Cd Length: 402  Bit Score: 450.94  E-value: 1.90e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   109 FVMMPLDSVTMGNTVNrrkAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQ 188
Cdd:pfam01373   1 FVMLPLDKITMSGHWN---AFNASLMALKGNGVYAITVDAWWGLVEKDGDMQFDWSYYAELAQMVKKAGLKLQPIISTHQ 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   189 CGGNVGDSVTIPLPQWVVEEVDKDpDLAYTDQWGRRNHEYISlgadtlPVLKGRTpVQCYADFMRAFRDNFKHLLGeTIV 268
Cdd:pfam01373  78 CGGNVGDDCNIPLPSWVLEEISKD-DLVFKDESGRRNPEYLS------PLLSGRT-IKVYSELYRSFAERFEGYKG-VIA 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   269 EIQVGMGPAGELRYPSYPEQEGtWKFPGIGAFQCYDKYSLSSLKAAAET-YG-----KPEWGSTGPTDAghYNNWPEDTQ 342
Cdd:pfam01373 149 KIYLSGGPCGELRYPSYPESNG-WRYPGRGKFQAYTEYAKSSFRAYAENkYGslgktNKAWGTKLPSDA--YINPPEDGE 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   343 FFKKEgGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFEN-MGVKISVKIAGIHWHYG--TRSHAPELTAGYYNtrfr 419
Cdd:pfam01373 226 FFRRN-GTYNSEYGKDFLEWYQGKLEEHGDQIGSSAHGIFDGsFGVKIGAKIAGIHWQYNnpTRPHGAELTAGYYD---- 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   420 dgYLPIAQMLARHNAIFNFTCIEMRD-HEQPQDALcaPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKAsALN 498
Cdd:pfam01373 301 --YLPLAKMFKKAGLDLTFTCLEMKDgGEQPEYSS--PETLVKQVQNAANQKGTELNGENALERGDSSAFGQVAEV-ATN 375

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 20465963   499 ldqnnegepREMCAFTYLRMNPELFQADNWGKFVAF 534
Cdd:pfam01373 376 ---------RSDSGFTLLRMNKRLFEGQNWQQLVEF 402
 
Name Accession Description Interval E-value
PLN00197 PLN00197
beta-amylase; Provisional
 1-575 0e+00

beta-amylase; Provisional


Pssm-ID: 215099 [Multi-domain]  Cd Length: 573  Bit Score: 1200.23  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963    1 MALNLSHQLGVLAGTPIKSGEMTDSSLLSISPPSARMMTPKAMNRNYKAHGTDPSPPMSPILGATRADLSVACKAFAVEN 80
Cdd:PLN00197   1 MAMNITHQIGALAGTPIKSGEITSTSTLSAKPPSPRMRCPKAMARNYEQKSQPTSPCMSPILGGMRADLSVACRAFATEN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   81 GIGTIEEQRTYREGGIGGKKEGGGGVPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGT 160
Cdd:PLN00197  81 DVVTIEEQREEREYRIGGTKEKGKGVPVYVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGV 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  161 YNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLK 240
Cdd:PLN00197 161 YNWGGYNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEVDKDPDLAYTDQWGRRNYEYVSLGCDTLPVLK 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  241 GRTPVQCYADFMRAFRDNFKHLLGETIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGK 320
Cdd:PLN00197 241 GRTPVQCYADFMRAFRDNFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWKFPGIGAFQCYDKYMLSSLKAAAEAAGK 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  321 PEWGSTGPTDAGHYNNWPEDTQFFKKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHY 400
Cdd:PLN00197 321 PEWGSTGPTDAGHYNNWPEDTRFFKKEGGGWNSPYGEFFLSWYSQMLLDHGERILSSAKSIFENTGVKISVKIAGIHWHY 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENAL 480
Cdd:PLN00197 401 GTRSHAPELTAGYYNTRFRDGYLPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVRQVALATREAEVPLAGENAL 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  481 PRYDDYAHEQILKASALNLDQNneGEPREMCAFTYLRMNPELFQADNWGKFVAFVKKMGEGRDSHRCREEVEREAEHFVH 560
Cdd:PLN00197 481 PRYDDYAHEQILQASSLNIDGN--SEDREMCAFTYLRMNPHLFQPDNWRRFVAFVKKMKEGKDSHRCREQVEREAEHFVH 558

                        570
                 ....*....|....*
gi 20465963  561 VTQPLVQEAAVALTH 575
Cdd:PLN00197 559 VTRPLVQEAAVALMH 573
PLN02803 PLN02803
beta-amylase
 106-541 0e+00

beta-amylase


Pssm-ID: 178400  Cd Length: 548  Bit Score: 703.54  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  106 VPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMS 185
Cdd:PLN02803  86 VPVFVMLPLDTVTMGGNLNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQKHGLKLQVVMS 165

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  186 FHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGE 265
Cdd:PLN02803 166 FHQCGGNVGDSCSIPLPPWVLEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGG 245

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  266 TIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFFK 345
Cdd:PLN02803 246 VIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEASAEAIGKKDWGRGGPHDAGEYKQFPEETGFFR 325

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  346 KEgGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRSHAPELTAGYYNTRFRDGYLPI 425
Cdd:PLN02803 326 RD-GTWNTEYGQFFLEWYSGKLLEHGDRILAAAEGIFQGTGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRNHDGYLPI 404

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  426 AQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKASAlnlDQNNEG 505
Cdd:PLN02803 405 ARMFSKHGVVLNFTCMEMRDGEQPEHANCSPEGLVRQVKMATRTAGTELAGENALERYDSAAFAQVVATSR---SDSGNG 481

                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 20465963  506 epreMCAFTYLRMNPELFQADNWGKFVAFVKKMGEG 541
Cdd:PLN02803 482 ----LTAFTYLRMNKRLFEGDNWRQLVEFVKNMSEG 513
PLN02801 PLN02801
beta-amylase
 106-543 0e+00

beta-amylase


Pssm-ID: 215431  Cd Length: 517  Bit Score: 557.51  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  106 VPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMS 185
Cdd:PLN02801  16 VPVYVMLPLGVVTADNVLEDEEGLEKQLKRLKEAGVDGVMVDVWWGIVESKGPKQYDWSAYRSLFELVQSFGLKIQAIMS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  186 FHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGE 265
Cdd:PLN02801  96 FHQCGGNVGDAVNIPIPQWVRDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEA 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  266 -TIVEIQVGMGPAGELRYPSYPEQEGtWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGStgPTDAGHYNNWPEDTQFF 344
Cdd:PLN02801 176 gVIIDIEVGLGPAGELRYPSYPETQG-WVFPGIGEFQCYDKYLKADFKEAATEAGHPEWEL--PDDAGEYNDTPEDTGFF 252

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  345 kKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRSHAPELTAGYYNTRFRDGYLP 424
Cdd:PLN02801 253 -KSNGTYLTEEGKFFLTWYSNKLLLHGDQILDEANKAFLGCKVKLAAKVSGIHWWYKHHSHAAELTAGYYNLKGRDGYRP 331

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  425 IAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKASALNLDQNNE 504
Cdd:PLN02801 332 IARMLSRHYGILNFTCLEMRDTEQPAEALSAPQELVQQVLSGAWREGIEVAGENALSRYDRRGYNQILLNARPNGVNKDG 411

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 20465963  505 GEPREMCAFTYLRMNPELFQADNWGKFVAFVKKMGEGRD 543
Cdd:PLN02801 412 KPKLRMFGVTYLRLSDELLEETNFSLFKTFVRKMHADQD 450
PLN02905 PLN02905
beta-amylase
 106-540 1.35e-155

beta-amylase


Pssm-ID: 178493 [Multi-domain]  Cd Length: 702  Bit Score: 462.15  E-value: 1.35e-155
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  106 VPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMS 185
Cdd:PLN02905 265 VPVYVMLPLGVINMKCELADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMS 344

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  186 FHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGE 265
Cdd:PLN02905 345 FHECGGNVGDDVCIPLPHWVAEIGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFFED 424

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  266 TIVE-IQVGMGPAGELRYPSYPEQEGtWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWgSTGPTDAGHYNNWPEDTQFF 344
Cdd:PLN02905 425 GVISmVEVGLGPCGELRYPSCPVKHG-WRYPGIGEFQCYDQYLLKSLRKAAEARGHLFW-ARGPDNTGSYNSQPHETGFF 502

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  345 kKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFEnmGVKISVKIAGIHWHYGTRSHAPELTAGYYNTRFRDGYLP 424
Cdd:PLN02905 503 -CDGGDYDGYYGRFFLNWYSQVLVDHGDRVLSLAKLAFE--GTCIAAKLPGVHWWYKTASHAAELTAGFYNPCNRDGYAA 579

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  425 IAQMLARHNAIFNFTCIEMRDHEQPQD---ALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKasalNLDQ 501
Cdd:PLN02905 580 IASMLKKHGAALNFVCGEVQMLNRPDDfseALGDPEGLAWQVLNAAWDVDTPVASENSLPCHDRVGYNKILE----NAKP 655

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 20465963  502 NNEGEPREMCAFTYLRMNPELFQADNWGKFVAFVKKM-GE 540
Cdd:PLN02905 656 LNDPDGRHFSSFTYLRLSPLLMERHNFVEFERFVKRMhGE 695
Glyco_hydro_14 pfam01373
Glycosyl hydrolase family 14; This family are beta amylases.
 109-534 1.90e-155

Glycosyl hydrolase family 14; This family are beta amylases.


Pssm-ID: 366599  Cd Length: 402  Bit Score: 450.94  E-value: 1.90e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   109 FVMMPLDSVTMGNTVNrrkAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQ 188
Cdd:pfam01373   1 FVMLPLDKITMSGHWN---AFNASLMALKGNGVYAITVDAWWGLVEKDGDMQFDWSYYAELAQMVKKAGLKLQPIISTHQ 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   189 CGGNVGDSVTIPLPQWVVEEVDKDpDLAYTDQWGRRNHEYISlgadtlPVLKGRTpVQCYADFMRAFRDNFKHLLGeTIV 268
Cdd:pfam01373  78 CGGNVGDDCNIPLPSWVLEEISKD-DLVFKDESGRRNPEYLS------PLLSGRT-IKVYSELYRSFAERFEGYKG-VIA 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   269 EIQVGMGPAGELRYPSYPEQEGtWKFPGIGAFQCYDKYSLSSLKAAAET-YG-----KPEWGSTGPTDAghYNNWPEDTQ 342
Cdd:pfam01373 149 KIYLSGGPCGELRYPSYPESNG-WRYPGRGKFQAYTEYAKSSFRAYAENkYGslgktNKAWGTKLPSDA--YINPPEDGE 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   343 FFKKEgGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFEN-MGVKISVKIAGIHWHYG--TRSHAPELTAGYYNtrfr 419
Cdd:pfam01373 226 FFRRN-GTYNSEYGKDFLEWYQGKLEEHGDQIGSSAHGIFDGsFGVKIGAKIAGIHWQYNnpTRPHGAELTAGYYD---- 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963   420 dgYLPIAQMLARHNAIFNFTCIEMRD-HEQPQDALcaPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKAsALN 498
Cdd:pfam01373 301 --YLPLAKMFKKAGLDLTFTCLEMKDgGEQPEYSS--PETLVKQVQNAANQKGTELNGENALERGDSSAFGQVAEV-ATN 375

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 20465963   499 ldqnnegepREMCAFTYLRMNPELFQADNWGKFVAF 534
Cdd:pfam01373 376 ---------RSDSGFTLLRMNKRLFEGQNWQQLVEF 402
PLN02161 PLN02161
beta-amylase
 106-538 2.84e-152

beta-amylase


Pssm-ID: 177820  Cd Length: 531  Bit Score: 447.94  E-value: 2.84e-152
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  106 VPVFVMMPLDSVTMGNT----VNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQ 181
Cdd:PLN02161  92 VPVFVMMPVDTFGIDASgcpkIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLH 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  182 AVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKH 261
Cdd:PLN02161 172 VALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEP 251

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  262 LLGETIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDT 341
Cdd:PLN02161 252 YIGNVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGV 331

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  342 QFFKKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIF------ENMGVKISVKIAGIHWHYGTRSHAPELTAGYYN 415
Cdd:PLN02161 332 PFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLrrrqesEKSSVMLVAKIGGIYWWYKTSSHPAELTAGYYN 411

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  416 TRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKas 495
Cdd:PLN02161 412 TALRDGYDPVASVLSRHGAALHIPCLDMADSETPEKYLCSPEGLRQQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRE-- 489

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 20465963  496 alNLDQNNEGEPRemcAFTYLRMNPELFQADNWGKFVAFVKKM 538
Cdd:PLN02161 490 --NCVQPNGDTLR---SFTFCRMNEKIFRAENWNNFVPFIRQM 527
PLN02705 PLN02705
beta-amylase
 106-538 4.84e-118

beta-amylase


Pssm-ID: 178307 [Multi-domain]  Cd Length: 681  Bit Score: 364.64  E-value: 4.84e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  106 VPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMS 185
Cdd:PLN02705 247 VPVYVMLAVGIINNFCQLVDPEGVRQELSHMKSLNVDGVVVDCWWGIVEGWNPQKYVWSGYRELFNIIREFKLKLQVVMA 326

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  186 FHQCGGNVGDSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGE 265
Cdd:PLN02705 327 FHEYGGNASGNVMISLPQWVLEIGKDNQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDLFVE 406

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  266 TIVE-IQVGMGPAGELRYPSYPEQEGtWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGStGPTDAGHYNNWPEDTQFF 344
Cdd:PLN02705 407 GLITaVEIGLGASGELKYPSFPERMG-WIYPGIGEFQCYDKYSQQNLRKAAKSRGHSFWAR-GPDNAGQYNSRPHETGFF 484

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  345 kKEGGGWNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENmgVKISVKIAGIHWHYGTRSHAPELTAGYYNTRFRDGYLP 424
Cdd:PLN02705 485 -CERGDYDSYYGRFFLHWYSQLLIDHADNVLSLANLAFEE--TKIIVKIPAVYWWYKTASHAAELTAGYYNPTNQDGYSP 561

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20465963  425 IAQMLARHNAIFNFTC--IEMRDHEQpQDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILKASalnlDQN 502
Cdd:PLN02705 562 VFETLKKHSVTVKFVCsgLQMSPNEN-DEALADPEGLSWQVLNSAWDRGLTVAGENAITCYDREGCMRLIEIA----KPR 636

                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 20465963  503 NEGEPREMCAFTYLRMNPeLFQADNW-GKFVAFVKKM 538
Cdd:PLN02705 637 NHPDHYHFSFFVYQQPSP-LVQGTTCfPELDYFIKCM 672
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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