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Conserved domains on  [gi|18447212|gb|AAL68197|]
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GH11924p [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
EDR1 super family cl18686
Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ...
 758-799 1.46e-06

Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ethylene-induced senescence, and is also involved in stress response signalling and cell death regulation.


The actual alignment was detected with superfamily member pfam14381:

Pssm-ID: 433922  Cd Length: 198  Bit Score: 49.86  E-value: 1.46e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 18447212   758 QELRHVLHTNFIPLGMVRSGCQFERAILFKGLADQIGLPCTL 799
Cdd:pfam14381 121 GELKDSLGSVVLPLGSLKIGLCRHRALLFKVLADSVGLPCRL 162
 
Name Accession Description Interval E-value
EDR1 pfam14381
Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ...
 758-799 1.46e-06

Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ethylene-induced senescence, and is also involved in stress response signalling and cell death regulation.


Pssm-ID: 433922  Cd Length: 198  Bit Score: 49.86  E-value: 1.46e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 18447212   758 QELRHVLHTNFIPLGMVRSGCQFERAILFKGLADQIGLPCTL 799
Cdd:pfam14381 121 GELKDSLGSVVLPLGSLKIGLCRHRALLFKVLADSVGLPCRL 162
 
Name Accession Description Interval E-value
EDR1 pfam14381
Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ...
 758-799 1.46e-06

Ethylene-responsive protein kinase Le-CTR1; EDR1 regulates disease resistance and ethylene-induced senescence, and is also involved in stress response signalling and cell death regulation.


Pssm-ID: 433922  Cd Length: 198  Bit Score: 49.86  E-value: 1.46e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 18447212   758 QELRHVLHTNFIPLGMVRSGCQFERAILFKGLADQIGLPCTL 799
Cdd:pfam14381 121 GELKDSLGSVVLPLGSLKIGLCRHRALLFKVLADSVGLPCRL 162
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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