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Conserved domains on  [gi|17861372|gb|AAK64186|]
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lysyl oxidase-like 4 [Homo sapiens]

Protein Classification

lysyl oxidase homolog( domain architecture ID 10641218)

lysyl oxidase homolog is a protein-lysine 6-oxidase that mediates the oxidation of peptidyl lysine residues to allysine in target proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
533-731 2.79e-139

Lysyl oxidase;


:

Pssm-ID: 460102  Cd Length: 204  Bit Score: 408.20  E-value: 2.79e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   533 PDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSA-----DHMDWPYGYRRLLRFSTQIYNLGRTDFRPKTGRDSWVW 607
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAyqiqrNPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   608 HQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITD 687
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLNGTKVAEGHKASFCLEDTECDPGVSKRYACANFGDQGISVGCWDTYRHDIDCQWIDITD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 17861372   688 VGPGNYIFQVIVNPHYEVAESDFSNNMLQCRCKYDGHRVWLHNC 731
Cdd:pfam01186 161 VPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 32-132 6.60e-42

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


:

Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 147.87  E-value: 6.60e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372     32 LRLVGpESKPEEGRLEVLHQGQWGTVCDDNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQ 111
Cdd:smart00202   1 VRLVG-GGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSD 79

                           90       100
                   ....*....|....*....|.
gi 17861372    112 CGSNGWGVSDCSHSEDVGVIC 132
Cdd:smart00202  80 CPHSGWGSHNCSHGEDAGVVC 100
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 311-411 5.39e-38

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


:

Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 136.70  E-value: 5.39e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    311 VRLRSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPIHLSEVRCRGYERTLSDC 390
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSDC 80

                           90       100
                   ....*....|....*....|.
gi 17861372    391 PALEGSQNGCQHENDAAVRCN 411
Cdd:smart00202  81 PHSGWGSHNCSHGEDAGVVCS 101
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 421-528 1.97e-24

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


:

Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 98.18  E-value: 1.97e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    421 VRLAGGRIPEEGLLEVQVevNGvpRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRaqeVVMSGVRCSGT 500
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYH--NG--QWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGP---IWLDNVRCSGT 73

                           90       100       110
                   ....*....|....*....|....*....|
gi 17861372    501 ELALQQCQRHGP-VH-CSHGGgrfLAGVSC 528
Cdd:smart00202  74 EASLSDCPHSGWgSHnCSHGE---DAGVVC 100
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 174-286 3.70e-15

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


:

Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 71.60  E-value: 3.70e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    174 VTEGAVEVKYEGHWRQVCDQGWTMNNSRVVCGMLGFPSEVpvdsHYYRKVWDLKMRDPksrlksltnknsFWIHQVTCLG 253
Cdd:smart00202   9 PCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAV----SASGSAYFGPGSGP------------IWLDNVRCSG 72

                           90       100       110
                   ....*....|....*....|....*....|...
gi 17861372    254 TEPHMANCqvqvaPARGKLRPACPGGMHAVVSC 286
Cdd:smart00202  73 TEASLSDC-----PHSGWGSHNCSHGEDAGVVC 100
 
Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
533-731 2.79e-139

Lysyl oxidase;


Pssm-ID: 460102  Cd Length: 204  Bit Score: 408.20  E-value: 2.79e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   533 PDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSA-----DHMDWPYGYRRLLRFSTQIYNLGRTDFRPKTGRDSWVW 607
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAyqiqrNPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   608 HQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITD 687
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLNGTKVAEGHKASFCLEDTECDPGVSKRYACANFGDQGISVGCWDTYRHDIDCQWIDITD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 17861372   688 VGPGNYIFQVIVNPHYEVAESDFSNNMLQCRCKYDGHRVWLHNC 731
Cdd:pfam01186 161 VPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 32-132 6.60e-42

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 147.87  E-value: 6.60e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372     32 LRLVGpESKPEEGRLEVLHQGQWGTVCDDNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQ 111
Cdd:smart00202   1 VRLVG-GGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSD 79

                           90       100
                   ....*....|....*....|.
gi 17861372    112 CGSNGWGVSDCSHSEDVGVIC 132
Cdd:smart00202  80 CPHSGWGSHNCSHGEDAGVVC 100
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 311-411 5.39e-38

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 136.70  E-value: 5.39e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    311 VRLRSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPIHLSEVRCRGYERTLSDC 390
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSDC 80

                           90       100
                   ....*....|....*....|.
gi 17861372    391 PALEGSQNGCQHENDAAVRCN 411
Cdd:smart00202  81 PHSGWGSHNCSHGEDAGVVCS 101
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 39-132 1.09e-34

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 127.11  E-value: 1.09e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    39 SKPEEGRLEVLHQGQWGTVCDDNFAIQEATVACRQLGF-EAALTWAHSAKYGQGE-GPIWLDNVRCVGTESSLDQCGSNG 116
Cdd:pfam00530   2 SSPCEGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCgGAVSAPSGCSYFGPGStGPIWLDDVRCSGNETSLWQCPHRP 81

                          90
                  ....*....|....*.
gi 17861372   117 WGVSDCSHSEDVGVIC 132
Cdd:pfam00530  82 WGNHNCSHSEDAGVIC 97
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 316-411 9.44e-32

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 119.02  E-value: 9.44e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   316 GAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFG-ARLGQGL-GPIHLSEVRCRGYERTLSDCPAL 393
Cdd:pfam00530   1 GSSPCEGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGcSYFGPGStGPIWLDDVRCSGNETSLWQCPHR 80

                          90
                  ....*....|....*...
gi 17861372   394 EGSQNGCQHENDAAVRCN 411
Cdd:pfam00530  81 PWGNHNCSHSEDAGVICS 98
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 421-528 1.97e-24

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 98.18  E-value: 1.97e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    421 VRLAGGRIPEEGLLEVQVevNGvpRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRaqeVVMSGVRCSGT 500
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYH--NG--QWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGP---IWLDNVRCSGT 73

                           90       100       110
                   ....*....|....*....|....*....|
gi 17861372    501 ELALQQCQRHGP-VH-CSHGGgrfLAGVSC 528
Cdd:smart00202  74 EASLSDCPHSGWgSHnCSHGE---DAGVVC 100
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 426-528 1.57e-22

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 92.44  E-value: 1.57e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   426 GRIPEEGLLEVqvEVNGvpRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETwFWSGTPRAQEVVMSGVRCSGTELALQ 505
Cdd:pfam00530   1 GSSPCEGRVEV--YHNG--SWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGC-SYFGPGSTGPIWLDDVRCSGNETSLW 75

                          90       100
                  ....*....|....*....|....*
gi 17861372   506 QCQRHGPV--HCSHGGGrflAGVSC 528
Cdd:pfam00530  76 QCPHRPWGnhNCSHSED---AGVIC 97
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 174-286 3.70e-15

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 71.60  E-value: 3.70e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    174 VTEGAVEVKYEGHWRQVCDQGWTMNNSRVVCGMLGFPSEVpvdsHYYRKVWDLKMRDPksrlksltnknsFWIHQVTCLG 253
Cdd:smart00202   9 PCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAV----SASGSAYFGPGSGP------------IWLDNVRCSG 72

                           90       100       110
                   ....*....|....*....|....*....|...
gi 17861372    254 TEPHMANCqvqvaPARGKLRPACPGGMHAVVSC 286
Cdd:smart00202  73 TEASLSDC-----PHSGWGSHNCSHGEDAGVVC 100
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 176-286 2.19e-13

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 66.63  E-value: 2.19e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   176 EGAVEVKYEGHWRQVCDQGWTMNNSRVVCGMLGFPSEVPVDSHYYRKVWDLKMRdpksrlksltnknsFWIHQVTCLGTE 255
Cdd:pfam00530   6 EGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGCSYFGPGSTGP--------------IWLDDVRCSGNE 71

                          90       100       110
                  ....*....|....*....|....*....|.
gi 17861372   256 PHMANCqvqvaPARGKLRPACPGGMHAVVSC 286
Cdd:pfam00530  72 TSLWQC-----PHRPWGNHNCSHSEDAGVIC 97
 
Name Accession Description Interval E-value
Lysyl_oxidase pfam01186
Lysyl oxidase;
533-731 2.79e-139

Lysyl oxidase;


Pssm-ID: 460102  Cd Length: 204  Bit Score: 408.20  E-value: 2.79e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   533 PDLVMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSA-----DHMDWPYGYRRLLRFSTQIYNLGRTDFRPKTGRDSWVW 607
Cdd:pfam01186   1 PDLVPDAAEIQQSAYLEDRPMYYLQCAMEENCLASSAyqiqrNPSDWHYGTRRLLRFTARVKNVGTADFRPKLPKHAWEW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   608 HQCHRHYHSIEVFTHYDLLTLNGSKVAEGHKASFCLEDTNCPTGLQRRYACANFGEQGVTVGCWDTYRHDIDCQWVDITD 687
Cdd:pfam01186  81 HQCHMHYHSMEVFAHYDVLDLNGTKVAEGHKASFCLEDTECDPGVSKRYACANFGDQGISVGCWDTYRHDIDCQWIDITD 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 17861372   688 VGPGNYIFQVIVNPHYEVAESDFSNNMLQCRCKYDGHRVWLHNC 731
Cdd:pfam01186 161 VPPGNYILKVVINPEFKVAESDFDNNAARCDLRYTGHRVWVYNC 204
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 32-132 6.60e-42

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 147.87  E-value: 6.60e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372     32 LRLVGpESKPEEGRLEVLHQGQWGTVCDDNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQ 111
Cdd:smart00202   1 VRLVG-GGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSD 79

                           90       100
                   ....*....|....*....|.
gi 17861372    112 CGSNGWGVSDCSHSEDVGVIC 132
Cdd:smart00202  80 CPHSGWGSHNCSHGEDAGVVC 100
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 311-411 5.39e-38

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 136.70  E-value: 5.39e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    311 VRLRSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPIHLSEVRCRGYERTLSDC 390
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGPIWLDNVRCSGTEASLSDC 80

                           90       100
                   ....*....|....*....|.
gi 17861372    391 PALEGSQNGCQHENDAAVRCN 411
Cdd:smart00202  81 PHSGWGSHNCSHGEDAGVVCS 101
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 39-132 1.09e-34

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 127.11  E-value: 1.09e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    39 SKPEEGRLEVLHQGQWGTVCDDNFAIQEATVACRQLGF-EAALTWAHSAKYGQGE-GPIWLDNVRCVGTESSLDQCGSNG 116
Cdd:pfam00530   2 SSPCEGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCgGAVSAPSGCSYFGPGStGPIWLDDVRCSGNETSLWQCPHRP 81

                          90
                  ....*....|....*.
gi 17861372   117 WGVSDCSHSEDVGVIC 132
Cdd:pfam00530  82 WGNHNCSHSEDAGVIC 97
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 316-411 9.44e-32

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 119.02  E-value: 9.44e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   316 GAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFG-ARLGQGL-GPIHLSEVRCRGYERTLSDCPAL 393
Cdd:pfam00530   1 GSSPCEGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGcSYFGPGStGPIWLDDVRCSGNETSLWQCPHR 80

                          90
                  ....*....|....*...
gi 17861372   394 EGSQNGCQHENDAAVRCN 411
Cdd:pfam00530  81 PWGNHNCSHSEDAGVICS 98
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 421-528 1.97e-24

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 98.18  E-value: 1.97e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    421 VRLAGGRIPEEGLLEVQVevNGvpRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRaqeVVMSGVRCSGT 500
Cdd:smart00202   1 VRLVGGGSPCEGRVEVYH--NG--QWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYFGPGSGP---IWLDNVRCSGT 73

                           90       100       110
                   ....*....|....*....|....*....|
gi 17861372    501 ELALQQCQRHGP-VH-CSHGGgrfLAGVSC 528
Cdd:smart00202  74 EASLSDCPHSGWgSHnCSHGE---DAGVVC 100
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 426-528 1.57e-22

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 92.44  E-value: 1.57e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   426 GRIPEEGLLEVqvEVNGvpRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETwFWSGTPRAQEVVMSGVRCSGTELALQ 505
Cdd:pfam00530   1 GSSPCEGRVEV--YHNG--SWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGC-SYFGPGSTGPIWLDDVRCSGNETSLW 75

                          90       100
                  ....*....|....*....|....*
gi 17861372   506 QCQRHGPV--HCSHGGGrflAGVSC 528
Cdd:pfam00530  76 QCPHRPWGnhNCSHSED---AGVIC 97
SR smart00202
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ...
 174-286 3.70e-15

Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.


Pssm-ID: 214555 [Multi-domain]  Cd Length: 101  Bit Score: 71.60  E-value: 3.70e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372    174 VTEGAVEVKYEGHWRQVCDQGWTMNNSRVVCGMLGFPSEVpvdsHYYRKVWDLKMRDPksrlksltnknsFWIHQVTCLG 253
Cdd:smart00202   9 PCEGRVEVYHNGQWGTVCDDGWDLRDANVVCRQLGFGGAV----SASGSAYFGPGSGP------------IWLDNVRCSG 72

                           90       100       110
                   ....*....|....*....|....*....|...
gi 17861372    254 TEPHMANCqvqvaPARGKLRPACPGGMHAVVSC 286
Cdd:smart00202  73 TEASLSDC-----PHSGWGSHNCSHGEDAGVVC 100
SRCR pfam00530
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ...
 176-286 2.19e-13

Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.


Pssm-ID: 459844  Cd Length: 98  Bit Score: 66.63  E-value: 2.19e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17861372   176 EGAVEVKYEGHWRQVCDQGWTMNNSRVVCGMLGFPSEVPVDSHYYRKVWDLKMRdpksrlksltnknsFWIHQVTCLGTE 255
Cdd:pfam00530   6 EGRVEVYHNGSWGTVCDDGWDLRDAHVVCRQLGCGGAVSAPSGCSYFGPGSTGP--------------IWLDDVRCSGNE 71

                          90       100       110
                  ....*....|....*....|....*....|.
gi 17861372   256 PHMANCqvqvaPARGKLRPACPGGMHAVVSC 286
Cdd:pfam00530  72 TSLWQC-----PHRPWGNHNCSHSEDAGVIC 97
SRCR_2 pfam15494
Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain ...
 433-467 3.40e-03

Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.


Pssm-ID: 464747  Cd Length: 99  Bit Score: 37.70  E-value: 3.40e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 17861372   433 LLEVQVEVNgvPRWGSVCSENWGLTEAMVACRQLG 467
Cdd:pfam15494   5 LLQVYSSAR--PSWLPVCSDDWNPAYGRAACQQLG 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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