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Conserved domains on  [gi|14334012|gb|AAK60503|]
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sucrose export defective 1 precursor [Arabidopsis thaliana]

Protein Classification

tocopherol cyclase( domain architecture ID 10010911)

tocopherol cyclase is involved in the synthesis of both tocopherols and tocotrienols (vitamin E), by catalyzing the conversion of benzoquinol substrates to the corresponding tocopherols or tocotrienols

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN02818 PLN02818
tocopherol cyclase
 74-477 0e+00

tocopherol cyclase


:

Pssm-ID: 215438  Cd Length: 403  Bit Score: 747.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   74 ELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQY 153
Cdd:PLN02818   1 ALRTPHSGYHFDGTPRRFFEGWYFKVSLPEVKQSFAFMYSIEDPAFRERMSGLEELLHGSRFTGVGAQILGPDDKYLCQF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  154 EQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRP 233
Cdd:PLN02818  81 TEDSTKFWGSRHELALGNTFAPKNGSTPPRSEVPPDEFYRRVEEGFQVTPFWHQGRLRDDGRSPYAKTVKTARWEYSTRP 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  234 VYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGA 313
Cdd:PLN02818 161 VYGWGDVGSKQKSTAGWLAALPVFEPHWQICMAHGLATGWIEWGGERYEFEDAPSYSEKNWGGGFPSKWFWVQCNVFDGA 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  314 TGeVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEART-NEAGTP 392
Cdd:PLN02818 241 SG-LSLTAGGGLRGLPLLPGVFEEVALIGVHYDGKFYEFVPWNGEVEWDVSPWGRWKLRAENETHEVELEATTaKEPGTV 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  393 LRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGdTSNTPELLKQALQVPLD 472
Cdd:PLN02818 320 LRAPTTDVGLAPFCRDTFAGKLKLQLWERSWDGSKGKLILDATSSMAAVEVGGGPWWSTWKG-TARMKEPLKSLLGLPVD 398


                 ....*
gi 14334012  473 LESAL 477
Cdd:PLN02818 399 VESIF 403
 
Name Accession Description Interval E-value
PLN02818 PLN02818
tocopherol cyclase
 74-477 0e+00

tocopherol cyclase


Pssm-ID: 215438  Cd Length: 403  Bit Score: 747.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   74 ELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQY 153
Cdd:PLN02818   1 ALRTPHSGYHFDGTPRRFFEGWYFKVSLPEVKQSFAFMYSIEDPAFRERMSGLEELLHGSRFTGVGAQILGPDDKYLCQF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  154 EQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRP 233
Cdd:PLN02818  81 TEDSTKFWGSRHELALGNTFAPKNGSTPPRSEVPPDEFYRRVEEGFQVTPFWHQGRLRDDGRSPYAKTVKTARWEYSTRP 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  234 VYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGA 313
Cdd:PLN02818 161 VYGWGDVGSKQKSTAGWLAALPVFEPHWQICMAHGLATGWIEWGGERYEFEDAPSYSEKNWGGGFPSKWFWVQCNVFDGA 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  314 TGeVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEART-NEAGTP 392
Cdd:PLN02818 241 SG-LSLTAGGGLRGLPLLPGVFEEVALIGVHYDGKFYEFVPWNGEVEWDVSPWGRWKLRAENETHEVELEATTaKEPGTV 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  393 LRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGdTSNTPELLKQALQVPLD 472
Cdd:PLN02818 320 LRAPTTDVGLAPFCRDTFAGKLKLQLWERSWDGSKGKLILDATSSMAAVEVGGGPWWSTWKG-TARMKEPLKSLLGLPVD 398


                 ....*
gi 14334012  473 LESAL 477
Cdd:PLN02818 399 VESIF 403
Tocopherol_cycl pfam14249
Tocopherol cyclase; This family contains tocopherol cyclases. These enzymes are involved in ...
 89-445 0e+00

Tocopherol cyclase; This family contains tocopherol cyclases. These enzymes are involved in the synthesis of tocopherols and tocotrienols (vitamin E).


Pssm-ID: 464115  Cd Length: 335  Bit Score: 573.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012    89 RKFFEGWYFRVSIPEKRESFCFMYSVENPafrqslsplevaLYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELV 168
Cdd:pfam14249   1 RRFFEGWYYRVTLPEIGQSFAFMYSIEDP------------LGGQPYSGGAAQILGPDDEYLCRTFPDVKKFWASPDELA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   169 LGNTFSAVPGAKAPNKEVP----PEEFNRRVSEGFQATPFWHQGHICDDGRTdyaetvKSARWEYSTRPVYGWGDVGAKQ 244
Cdd:pfam14249  69 LGHWFDARPGGKTNLSINPqllpPQEFERRVEEGYQATATWHQGRLRDPGTG------KTCRWEYSIKPVYGWGDPGGPQ 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   245 KSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGeVALTAGGG 324
Cdd:pfam14249 143 QATAGWLSYLPIFEPGWQILMAHGLATGWIEWNGKRYEFTNAPAYSEKNWGGAFPRKWFWVQCNSFEGEPD-LALTAGGG 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   325 LRQLPGlteTYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEvGLAT 404
Cdd:pfam14249 222 RRGVLW---WMESVALIGIHYQGKFYEFVPWNGQVSWQVTPWGRWQMRAENERFEVELEGTTDRPGTPLRAPTAD-GLQF 297

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 14334012   405 ACRDSCYGELKLQIWERLYdgsKGKVILETKSSMAAVEIGG 445
Cdd:pfam14249 298 FCRDTMKGKLTLQLWERRG---KGKLILDATSSLAGLEVGG 335
 
Name Accession Description Interval E-value
PLN02818 PLN02818
tocopherol cyclase
 74-477 0e+00

tocopherol cyclase


Pssm-ID: 215438  Cd Length: 403  Bit Score: 747.67  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   74 ELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQY 153
Cdd:PLN02818   1 ALRTPHSGYHFDGTPRRFFEGWYFKVSLPEVKQSFAFMYSIEDPAFRERMSGLEELLHGSRFTGVGAQILGPDDKYLCQF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  154 EQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRP 233
Cdd:PLN02818  81 TEDSTKFWGSRHELALGNTFAPKNGSTPPRSEVPPDEFYRRVEEGFQVTPFWHQGRLRDDGRSPYAKTVKTARWEYSTRP 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  234 VYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGA 313
Cdd:PLN02818 161 VYGWGDVGSKQKSTAGWLAALPVFEPHWQICMAHGLATGWIEWGGERYEFEDAPSYSEKNWGGGFPSKWFWVQCNVFDGA 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  314 TGeVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEART-NEAGTP 392
Cdd:PLN02818 241 SG-LSLTAGGGLRGLPLLPGVFEEVALIGVHYDGKFYEFVPWNGEVEWDVSPWGRWKLRAENETHEVELEATTaKEPGTV 319

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012  393 LRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGdTSNTPELLKQALQVPLD 472
Cdd:PLN02818 320 LRAPTTDVGLAPFCRDTFAGKLKLQLWERSWDGSKGKLILDATSSMAAVEVGGGPWWSTWKG-TARMKEPLKSLLGLPVD 398


                 ....*
gi 14334012  473 LESAL 477
Cdd:PLN02818 399 VESIF 403
Tocopherol_cycl pfam14249
Tocopherol cyclase; This family contains tocopherol cyclases. These enzymes are involved in ...
 89-445 0e+00

Tocopherol cyclase; This family contains tocopherol cyclases. These enzymes are involved in the synthesis of tocopherols and tocotrienols (vitamin E).


Pssm-ID: 464115  Cd Length: 335  Bit Score: 573.02  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012    89 RKFFEGWYFRVSIPEKRESFCFMYSVENPafrqslsplevaLYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELV 168
Cdd:pfam14249   1 RRFFEGWYYRVTLPEIGQSFAFMYSIEDP------------LGGQPYSGGAAQILGPDDEYLCRTFPDVKKFWASPDELA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   169 LGNTFSAVPGAKAPNKEVP----PEEFNRRVSEGFQATPFWHQGHICDDGRTdyaetvKSARWEYSTRPVYGWGDVGAKQ 244
Cdd:pfam14249  69 LGHWFDARPGGKTNLSINPqllpPQEFERRVEEGYQATATWHQGRLRDPGTG------KTCRWEYSIKPVYGWGDPGGPQ 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   245 KSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGeVALTAGGG 324
Cdd:pfam14249 143 QATAGWLSYLPIFEPGWQILMAHGLATGWIEWNGKRYEFTNAPAYSEKNWGGAFPRKWFWVQCNSFEGEPD-LALTAGGG 221

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14334012   325 LRQLPGlteTYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEvGLAT 404
Cdd:pfam14249 222 RRGVLW---WMESVALIGIHYQGKFYEFVPWNGQVSWQVTPWGRWQMRAENERFEVELEGTTDRPGTPLRAPTAD-GLQF 297

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 14334012   405 ACRDSCYGELKLQIWERLYdgsKGKVILETKSSMAAVEIGG 445
Cdd:pfam14249 298 FCRDTMKGKLTLQLWERRG---KGKLILDATSSLAGLEVGG 335
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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