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Conserved domains on  [gi|72533555|gb|AAI01341|]
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FAM153C protein [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM153 pfam15722
FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 1-114 3.00e-79

FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 289 amino acids in length.


:

Pssm-ID: 464825  Cd Length: 114  Bit Score: 229.75  E-value: 3.00e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 72533555     1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80
Cdd:pfam15722   1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 72533555    81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
Cdd:pfam15722  81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
 
Name Accession Description Interval E-value
FAM153 pfam15722
FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 1-114 3.00e-79

FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 289 amino acids in length.


Pssm-ID: 464825  Cd Length: 114  Bit Score: 229.75  E-value: 3.00e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 72533555     1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80
Cdd:pfam15722   1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 72533555    81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
Cdd:pfam15722  81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
 
Name Accession Description Interval E-value
FAM153 pfam15722
FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
 1-114 3.00e-79

FAM153 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 289 amino acids in length.


Pssm-ID: 464825  Cd Length: 114  Bit Score: 229.75  E-value: 3.00e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 72533555     1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80
Cdd:pfam15722   1 MVDKDTERDIEMKRQLRRLRELHLYSTWKKYQEAMKTSLGVPQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKL 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 72533555    81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
Cdd:pfam15722  81 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEV 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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