NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|111185509|gb|AAH29868|]
View 

SNX25 protein [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
RGS_SNX25 cd08720
Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; ...
62-170 4.45e-58

Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the SNX25 (Sorting Nexin 25) protein, a member of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. SNX25 is a member of the Dopamine receptors (DAR) signalplex and regulates the trafficking of D1 and D2 DARs.


:

Pssm-ID: 188675  Cd Length: 110  Bit Score: 189.16  E-value: 4.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  62 ILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVESK-EISVEKSLYKEIQQCLVGNKGI 140
Cdd:cd08720    1 ILANVFGRKYLSQFLERMDSQALIGFWEAVEELRSANKSEWHQLGAEIFYTFIVEPTaEIKVDKSLRKRIEQFLLGDKGP 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 111185509 141 EVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08720   81 EVFYEVQENVVETLEEKYYPSFVVSDQYKQ 110
PX_domain super family cl02563
The Phox Homology domain, a phosphoinositide binding module; The PX domain is a ...
273-375 1.88e-50

The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.


The actual alignment was detected with superfamily member cd06878:

Pssm-ID: 470617  Cd Length: 127  Bit Score: 169.48  E-value: 1.88e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 273 WWCENLGMWKASITSGEVTEENGEQLPCYFVMVSLQEVG----GVETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPS 348
Cdd:cd06878    1 RWCEHLGKWRANIQSAEVTVEDDKEVPLYVIVVHVSEVGlnedESISSGWVVTRKLSEFHDLHRKLKECSSWLKKVELPS 80
                         90       100
                 ....*....|....*....|....*..
gi 111185509 349 LSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:cd06878   81 LSKKWFKSIDKKFLDKSKNQLQKYLQF 107
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
417-523 3.46e-39

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


:

Pssm-ID: 462541  Cd Length: 111  Bit Score: 138.90  E-value: 3.46e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  417 WVRRTLIA----LVQVTFGRTINKQIRDTVSWIFSEQMLVYYINIFRDAFWPNGKLAPPTTIRSKEQSQETKQRAQQKLL 492
Cdd:pfam08628   1 WLRRRALNalkqVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAEPPPERTEEEKLRTRKEARKLLL 80
                          90       100       110
                  ....*....|....*....|....*....|.
gi 111185509  493 ENIPDMLQSLVGQQNARHGIIKIFNALQETR 523
Cdd:pfam08628  81 SLIPDALGSVVGRENAREAARRVFDMLQNPR 111
 
Name Accession Description Interval E-value
RGS_SNX25 cd08720
Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; ...
62-170 4.45e-58

Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the SNX25 (Sorting Nexin 25) protein, a member of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. SNX25 is a member of the Dopamine receptors (DAR) signalplex and regulates the trafficking of D1 and D2 DARs.


Pssm-ID: 188675  Cd Length: 110  Bit Score: 189.16  E-value: 4.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  62 ILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVESK-EISVEKSLYKEIQQCLVGNKGI 140
Cdd:cd08720    1 ILANVFGRKYLSQFLERMDSQALIGFWEAVEELRSANKSEWHQLGAEIFYTFIVEPTaEIKVDKSLRKRIEQFLLGDKGP 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 111185509 141 EVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08720   81 EVFYEVQENVVETLEEKYYPSFVVSDQYKQ 110
PX_SNX25 cd06878
The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a ...
273-375 1.88e-50

The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. The function of SNX25 is not yet known. It has been found in exosomes from human malignant pleural effusions. SNX25 shows the same domain architecture as SNX13 and SNX14, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132788  Cd Length: 127  Bit Score: 169.48  E-value: 1.88e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 273 WWCENLGMWKASITSGEVTEENGEQLPCYFVMVSLQEVG----GVETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPS 348
Cdd:cd06878    1 RWCEHLGKWRANIQSAEVTVEDDKEVPLYVIVVHVSEVGlnedESISSGWVVTRKLSEFHDLHRKLKECSSWLKKVELPS 80
                         90       100
                 ....*....|....*....|....*..
gi 111185509 349 LSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:cd06878   81 LSKKWFKSIDKKFLDKSKNQLQKYLQF 107
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
417-523 3.46e-39

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


Pssm-ID: 462541  Cd Length: 111  Bit Score: 138.90  E-value: 3.46e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  417 WVRRTLIA----LVQVTFGRTINKQIRDTVSWIFSEQMLVYYINIFRDAFWPNGKLAPPTTIRSKEQSQETKQRAQQKLL 492
Cdd:pfam08628   1 WLRRRALNalkqVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAEPPPERTEEEKLRTRKEARKLLL 80
                          90       100       110
                  ....*....|....*....|....*....|.
gi 111185509  493 ENIPDMLQSLVGQQNARHGIIKIFNALQETR 523
Cdd:pfam08628  81 SLIPDALGSVVGRENAREAARRVFDMLQNPR 111
RGS pfam00615
Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for ...
59-171 3.39e-25

Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 459870  Cd Length: 117  Bit Score: 100.38  E-value: 3.39e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509   59 FEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNA-NKNEIPQLVGEIYQNFFVES--KEISVEKSLYKEIQQCLV 135
Cdd:pfam00615   2 FDSLLEDQPGRRLFRQFLESEFSEENLEFWLACEEFKKAdPDEERLKKAKEIYNEFLAPGspKEINLDSDLREEIRENLE 81
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 111185509  136 GNKGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEKL 171
Cdd:pfam00615  82 KEPTRDLFDEAQAEVYELMEKDSYPRFLKSPLYLRL 117
RGS smart00315
Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins ...
59-171 6.33e-13

Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 214613  Cd Length: 118  Bit Score: 65.37  E-value: 6.33e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509    59 FEDILANTFYREHFGMYMERMDKRALISFWESVE-HLKNANKNEIPQLVGEIYQNFFVE--SKEISVEKSLYKEIQQCLV 135
Cdd:smart00315   2 LESLLSDPIGRLLFREFLESEFSEENLEFWLAVEeFKKAEDDEERIAKAREIYDKFLSPnaPKEVNLDSDLREKIEENLE 81
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 111185509   136 GNK-GIEVFYKIQEDVYETLKDRYYPSFIVSDLYEKL 171
Cdd:smart00315  82 SEEpPPDLFDEAQREVYELLEKDSFPRFLESDYYLRF 118
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
316-375 3.11e-09

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 53.78  E-value: 3.11e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  316 KNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:pfam00787   7 EEWSVRRRYSDFVELHKKLLRKFPSVIIPPLP--PKRWLGRYNEEFIEKRRKGLEQYLQR 64
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
315-375 6.32e-08

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 50.81  E-value: 6.32e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185509   315 TKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLP-FKSIDQKFMEKSKNQLNKFLQE 375
Cdd:smart00312  25 LEEWTVSRRYSDFLELHSKLKKHFPRSILPPLPGKKLFGrLNNFSEEFIEKRRRGLEKYLQS 86
 
Name Accession Description Interval E-value
RGS_SNX25 cd08720
Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; ...
62-170 4.45e-58

Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 25 (SNX25) protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the SNX25 (Sorting Nexin 25) protein, a member of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. SNX25 is a member of the Dopamine receptors (DAR) signalplex and regulates the trafficking of D1 and D2 DARs.


Pssm-ID: 188675  Cd Length: 110  Bit Score: 189.16  E-value: 4.45e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  62 ILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVESK-EISVEKSLYKEIQQCLVGNKGI 140
Cdd:cd08720    1 ILANVFGRKYLSQFLERMDSQALIGFWEAVEELRSANKSEWHQLGAEIFYTFIVEPTaEIKVDKSLRKRIEQFLLGDKGP 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 111185509 141 EVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08720   81 EVFYEVQENVVETLEEKYYPSFVVSDQYKQ 110
PX_SNX25 cd06878
The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a ...
273-375 1.88e-50

The phosphoinositide binding Phox Homology domain of Sorting Nexin 25; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. The function of SNX25 is not yet known. It has been found in exosomes from human malignant pleural effusions. SNX25 shows the same domain architecture as SNX13 and SNX14, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132788  Cd Length: 127  Bit Score: 169.48  E-value: 1.88e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 273 WWCENLGMWKASITSGEVTEENGEQLPCYFVMVSLQEVG----GVETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPS 348
Cdd:cd06878    1 RWCEHLGKWRANIQSAEVTVEDDKEVPLYVIVVHVSEVGlnedESISSGWVVTRKLSEFHDLHRKLKECSSWLKKVELPS 80
                         90       100
                 ....*....|....*....|....*..
gi 111185509 349 LSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:cd06878   81 LSKKWFKSIDKKFLDKSKNQLQKYLQF 107
Nexin_C pfam08628
Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the ...
417-523 3.46e-39

Sorting nexin C terminal; This region is found a the C terminal of proteins belonging to the sorting nexin family. It is found on proteins which also contain pfam00787.


Pssm-ID: 462541  Cd Length: 111  Bit Score: 138.90  E-value: 3.46e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  417 WVRRTLIA----LVQVTFGRTINKQIRDTVSWIFSEQMLVYYINIFRDAFWPNGKLAPPTTIRSKEQSQETKQRAQQKLL 492
Cdd:pfam08628   1 WLRRRALNalkqVLQQLLGDTIERKLRESVEWLTSEEQVASYIRLLRDALWPGGLLAEPPPERTEEEKLRTRKEARKLLL 80
                          90       100       110
                  ....*....|....*....|....*....|.
gi 111185509  493 ENIPDMLQSLVGQQNARHGIIKIFNALQETR 523
Cdd:pfam08628  81 SLIPDALGSVVGRENAREAARRVFDMLQNPR 111
RGS pfam00615
Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for ...
59-171 3.39e-25

Regulator of G protein signaling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 459870  Cd Length: 117  Bit Score: 100.38  E-value: 3.39e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509   59 FEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNA-NKNEIPQLVGEIYQNFFVES--KEISVEKSLYKEIQQCLV 135
Cdd:pfam00615   2 FDSLLEDQPGRRLFRQFLESEFSEENLEFWLACEEFKKAdPDEERLKKAKEIYNEFLAPGspKEINLDSDLREEIRENLE 81
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 111185509  136 GNKGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEKL 171
Cdd:pfam00615  82 KEPTRDLFDEAQAEVYELMEKDSYPRFLKSPLYLRL 117
RGS smart00315
Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins ...
59-171 6.33e-13

Regulator of G protein signalling domain; RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.


Pssm-ID: 214613  Cd Length: 118  Bit Score: 65.37  E-value: 6.33e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509    59 FEDILANTFYREHFGMYMERMDKRALISFWESVE-HLKNANKNEIPQLVGEIYQNFFVE--SKEISVEKSLYKEIQQCLV 135
Cdd:smart00315   2 LESLLSDPIGRLLFREFLESEFSEENLEFWLAVEeFKKAEDDEERIAKAREIYDKFLSPnaPKEVNLDSDLREKIEENLE 81
                           90       100       110
                   ....*....|....*....|....*....|....*..
gi 111185509   136 GNK-GIEVFYKIQEDVYETLKDRYYPSFIVSDLYEKL 171
Cdd:smart00315  82 SEEpPPDLFDEAQREVYELLEKDSFPRFLESDYYLRF 118
PX_SNX13 cd06873
The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a ...
283-375 7.34e-10

The phosphoinositide binding Phox Homology domain of Sorting Nexin 13; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX13, also called RGS-PX1, contains an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs. It specifically binds to the stimulatory subunit of the heterotrimeric G protein G(alpha)s, serving as its GTPase activating protein, through the RGS domain. It preferentially binds phosphatidylinositol-3-phosphate (PI3P) through the PX domain and is localized in early endosomes. SNX13 is involved in endosomal sorting of EGFR into multivesicular bodies (MVB) for delivery to the lysosome.


Pssm-ID: 132783  Cd Length: 120  Bit Score: 56.89  E-value: 7.34e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 283 ASITSGEVTEENGEQLPCYFVMVSLQEVGGVEtKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKSIDQKFM 362
Cdd:cd06873    7 AVIINTGIVKEHGKTYAVYAISVTRIYPNGQE-ESWHVYRRYSDFHDLHMRLKEKFPNLSKLSFP--GKKTFNNLDRAFL 83
                         90
                 ....*....|...
gi 111185509 363 EKSKNQLNKFLQE 375
Cdd:cd06873   84 EKRRKMLNQYLQS 96
PX_SNX14 cd06877
The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a ...
281-374 8.73e-10

The phosphoinositide binding Phox Homology domain of Sorting Nexin 14; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX14 may be involved in recruiting other proteins to the membrane via protein-protein and protein-ligand interaction. It is expressed in the embryonic nervous system of mice, and is co-expressed in the motoneurons and the anterior pituary with Islet-1. SNX14 shows a similar domain architecture as SNX13, containing an N-terminal PXA domain, a regulator of G protein signaling (RGS) domain, a PX domain, and a C-terminal domain that is conserved in some SNXs.


Pssm-ID: 132787  Cd Length: 119  Bit Score: 56.62  E-value: 8.73e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 281 WKASITSGE--VTEENGEQLPCYFVMVS--LQEVGGVETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKS 356
Cdd:cd06877    3 WRVSIPYVEmrRDPSNGERIYVFCIEVErnDRRAKGHEPQHWSVLRRYNEFYVLESKLTEFHGEFPDAPLP--SRRIFGP 80
                         90
                 ....*....|....*...
gi 111185509 357 IDQKFMEKSKNQLNKFLQ 374
Cdd:cd06877   81 KSYEFLESKREIFEEFLQ 98
PX_domain cd06093
The Phox Homology domain, a phosphoinositide binding module; The PX domain is a ...
282-375 2.69e-09

The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases, other PIs such as PI4P or PI(3,4)P2, among others, are the preferred substrates. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction, as in the cases of p40phox, p47phox, and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs, which play important roles in endosomal sorting.


Pssm-ID: 132768 [Multi-domain]  Cd Length: 106  Bit Score: 54.67  E-value: 2.69e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 282 KASITSGEVTEENGEQLPCYFVMVSLQEvggveTKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKSIDQKF 361
Cdd:cd06093    1 SVSIPDYEKVKDGGKKYVVYIIEVTTQG-----GEEWTVYRRYSDFEELHEKLKKKFPGVILPPLP--PKKLFGNLDPEF 73
                         90
                 ....*....|....
gi 111185509 362 MEKSKNQLNKFLQE 375
Cdd:cd06093   74 IEERRKQLEQYLQS 87
PX pfam00787
PX domain; PX domains bind to phosphoinositides.
316-375 3.11e-09

PX domain; PX domains bind to phosphoinositides.


Pssm-ID: 459940  Cd Length: 84  Bit Score: 53.78  E-value: 3.11e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  316 KNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:pfam00787   7 EEWSVRRRYSDFVELHKKLLRKFPSVIIPPLP--PKRWLGRYNEEFIEKRRKGLEQYLQR 64
RGS cd07440
Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part ...
63-170 8.56e-09

Regulator of G protein signaling (RGS) domain superfamily; The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. While inactive, G-alpha-subunits bind GDP, which is released and replaced by GTP upon agonist activation. GTP binding leads to dissociation of the alpha-subunit and the beta-gamma-dimer, allowing them to interact with effectors molecules and propagate signaling cascades associated with cellular growth, survival, migration, and invasion. Deactivation of the G-protein signaling controlled by the RGS domain accelerates GTPase activity of the alpha subunit by hydrolysis of GTP to GDP, which results in the reassociation of the alpha-subunit with the beta-gamma-dimer and thereby inhibition of downstream activity. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins are also involved in apoptosis and cell proliferation, as well as modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play important roles in neuronal signals modulation. Some RGS proteins are principal elements needed for proper vision.


Pssm-ID: 188659 [Multi-domain]  Cd Length: 113  Bit Score: 53.55  E-value: 8.56e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  63 LANTFYREHFGMYMERMDKRALISFWESVEHLKNAN--KNEIPQLVGEIYQNFFVES--KEISVEKSLYKEIQQCLVG-N 137
Cdd:cd07440    1 LRDPYGLEYFRQFLKSEHCEENLEFWLAVEKFKKTTssDEELKSKAKEIYDKYISKDapKEINIPESIREEIEENLEEpY 80
                         90       100       110
                 ....*....|....*....|....*....|...
gi 111185509 138 KGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd07440   81 PDPDCFDEAQEHILNLLEKDSYPRFLKSDLYLK 113
RGS_RGS11 cd08740
Regulator of G protein signaling (RGS) domain found in the RGS11 protein; The RGS (Regulator ...
59-172 2.14e-08

Regulator of G protein signaling (RGS) domain found in the RGS11 protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS11 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Other members of the R7 subfamily (Neuronal RGS) include: RGS6, RGS7, and RGS9, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. RGS11 is expressed exclusively in retinal ON-bipolar neurons in which it forms complexes with G-beta-5 and R7AP (RGS7 anchor protein ) and plays crucial roles in processing the light responses of retinal neurons.


Pssm-ID: 188694  Cd Length: 126  Bit Score: 52.61  E-value: 2.14e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  59 FEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFV--ESKEISVEKslyKEIQQCLVG 136
Cdd:cd08740   10 FRELLNDPVGRKEFLDFLEKEFSAENLSFWEACEELRYGEQSKIPELVDSVYQQFLApgATRWVNIDS---KTMERTLEG 86
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 111185509 137 NKGIE--VFYKIQEDVYETLKDRYYPSFIVSDLYEKLL 172
Cdd:cd08740   87 LKQPHryVLDDAQMHIYMLMKKDSYPRFLKSDLYKNLL 124
RGS_RGS6 cd08737
Regulator of G protein signaling (RGS) domain found in the RGS6 protein; The RGS (Regulator of ...
59-173 3.41e-08

Regulator of G protein signaling (RGS) domain found in the RGS6 protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS6 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). Other members of the R7 subfamily (Neuronal RGS) include: RGS7, RGS9, and RGS11, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. RGS6 exists in multiple splice isoforms with identical RGS domains, but possess complete or incomplete GGL domains and distinct N- and C-terminal domains. RGS6 interacts with SCG10, a neuronal growth-associated protein and therefore regulates neuronal differentiation. Another RGS6-binding protein is DMAP1, a component of the Dnmt1 complex involved in repression of newly replicated genes. Mutations of a critical residue required for interaction of RGS6 protein with G proteins did not affect the ability of RGS6 to interact with both SCG10 and DMAP1. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis.


Pssm-ID: 188691  Cd Length: 125  Bit Score: 52.33  E-value: 3.41e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  59 FEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVESKE--ISVEKSLYKEIQQClVG 136
Cdd:cd08737   10 LDEVLKDPVGRDQFLRFLESEFSSENLRFWLAVQDLKKQPLQDVAKRVEEIWQEFLAPGAPsaINLDSHSYEKTSQN-VK 88
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 111185509 137 NKGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEKLLI 173
Cdd:cd08737   89 DPGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLL 125
PX_MDM1p cd06876
The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a ...
292-375 3.44e-08

The phosphoinositide binding Phox Homology domain of yeast MDM1p; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Yeast MDM1p is a filament-like protein localized in punctate structures distributed throughout the cytoplasm. It plays an important role in nuclear and mitochondrial transmission to daughter buds. Members of this subfamily show similar domain architectures as some sorting nexins (SNXs). Some members are similar to SNX19 in that they contain an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. Others are similar to SNX13 and SNX14, which also harbor these three domains as well as a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132786  Cd Length: 133  Bit Score: 52.31  E-value: 3.44e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 292 EENGEQLPCYFVMVSLQEVGGVETkNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNK 371
Cdd:cd06876   32 EEEGKEFVVYLIEVQRLNNDDQSS-GWVVARRYSEFLELHKYLKKRYPGVLKLDFPQKRKISLKYSKTLLVEERRKALEK 110

                 ....
gi 111185509 372 FLQE 375
Cdd:cd06876  111 YLQE 114
RGS_R7-like cd08705
Regulator of G protein signaling (RGS) domain found in the R7 subfamily of proteins; The RGS ...
57-168 4.77e-08

Regulator of G protein signaling (RGS) domain found in the R7 subfamily of proteins; The RGS (Regulator of G-protein Signaling) domain is an essential part of the R7 (Neuronal RGS) protein subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. The R7 subfamily includes RGS6, RGS7, RGS9, and RGS11, all of which, in humans, are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes. In addition, R7 proteins were found to bind many other proteins outside of the G protein signaling pathways including: m-opioid receptor, beta-arrestin, alpha-actinin-2, NMDAR, polycystin, spinophilin, guanylyl cyclase, among others.


Pssm-ID: 188660  Cd Length: 121  Bit Score: 51.47  E-value: 4.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  57 LQFEDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVES--KEISVEKSLYKEIQQCL 134
Cdd:cd08705    7 FSFSELLKDPVGREQFLKFLEKEFSGENLRFWEACQDLKYGPQSQVPEKVQEIYQEFLAPGapSWINIDSKTMEITLKNL 86
                         90       100       110
                 ....*....|....*....|....*....|....
gi 111185509 135 vGNKGIEVFYKIQEDVYETLKDRYYPSFIVSDLY 168
Cdd:cd08705   87 -KDPHRYTFDAAQEHIYMLMKKDSYPRFLRSDIY 119
PX smart00312
PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function ...
315-375 6.32e-08

PhoX homologous domain, present in p47phox and p40phox; Eukaryotic domain of unknown function present in phox proteins, PLD isoforms, a PI3K isoform.


Pssm-ID: 214610  Cd Length: 105  Bit Score: 50.81  E-value: 6.32e-08
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185509   315 TKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLP-FKSIDQKFMEKSKNQLNKFLQE 375
Cdd:smart00312  25 LEEWTVSRRYSDFLELHSKLKKHFPRSILPPLPGKKLFGrLNNFSEEFIEKRRRGLEKYLQS 86
RGS_RGS7 cd08738
Regulator of G protein signaling (RGS) domain found in the RGS7 protein; The RGS (Regulator of ...
60-170 6.45e-08

Regulator of G protein signaling (RGS) domain found in the RGS7 protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS7 protein, a member of R7 subfamily of the RGS protein family. RGS is a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. Other members of the R7 subfamily (Neuronal RGS) include: RGS6, RGS9, and RGS11, all of which are expressed predominantly in the nervous system, form an obligatory complex with G-beta-5, and play important roles in the regulation of crucial neuronal processes such as vision and motor control. Additionally they have been implicated in many neurological conditions such as anxiety, schizophrenia, and drug dependence. R7 RGS proteins are key modulators of the pharmacological effects of drugs involved in the development of tolerance and addiction. In addition, RGS7 was found to bind a component of the synaptic fusion complex, snapin, and some other proteins outside of G protein signaling pathways.


Pssm-ID: 188692  Cd Length: 121  Bit Score: 51.26  E-value: 6.45e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  60 EDILANTFYREHFGMYMERMDKRALISFWESVEHLKNANKNEIPQLVGEIYQNFFVES--KEISVEKSLYKEIQQClVGN 137
Cdd:cd08738   10 DEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIREVPSRVQEIWQEFLAPGapSAINLDSKSYDKTTQN-VKD 88
                         90       100       110
                 ....*....|....*....|....*....|...
gi 111185509 138 KGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08738   89 PGRYTFEDAQEHIYKLMKSDSYPRFIRSSAYQE 121
PX_SNX19_like_plant cd06872
The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins; ...
305-374 2.02e-05

The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized plant proteins containing an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some sorting nexins (SNXs). This is the same domain architecture found in SNX19. SNX13 and SNX14 also contain these three domains but also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction.


Pssm-ID: 132782  Cd Length: 107  Bit Score: 43.66  E-value: 2.02e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 305 VSLQEVGGVETKNWTVPRRLSEFQNLHRKLSEcVPSLkKVQLPSLSKLPfKSIDQKFMEKSKNQLNKFLQ 374
Cdd:cd06872   20 VYSVAVTDNENETWVVKRRFRNFETLHRRLKE-VPKY-NLELPPKRFLS-SSLDGAFIEERCKLLDKYLK 86
PX_SNARE cd06897
The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain ...
313-375 2.21e-05

The phosphoinositide binding Phox Homology domain of SNARE proteins from fungi; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. This subfamily is composed of fungal proteins similar to Saccharomyces cerevisiae Vam7p. They contain an N-terminal PX domain and a C-terminal SNARE domain. The SNARE (Soluble NSF attachment protein receptor) family of proteins are integral membrane proteins that serve as key factors for vesicular trafficking. Vam7p is anchored at the vacuolar membrane through the specific interaction of its PX domain with phosphatidylinositol-3-phosphate (PI3P) present in bilayers. It plays an essential role in vacuole fusion. The PX domain is involved in targeting of proteins to PI-enriched membranes, and may also be involved in protein-protein interaction.


Pssm-ID: 132807  Cd Length: 108  Bit Score: 43.80  E-value: 2.21e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185509 313 VETKNWTVPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:cd06897   24 LPLRSYTVSRRYSEFVALHKQLESEVGIEPPYPLPPKSWFLSTSSNPKLVEERRVGLEAFLRA 86
RGS_PX cd08729
Regulator of G protein signaling domain; These uncharacterized RGS-like domains are found in ...
75-170 3.60e-05

Regulator of G protein signaling domain; These uncharacterized RGS-like domains are found in proteins that also contain one or more PX domains. The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. As a major G-protein regulator, the RGS domain containing proteins that are involves in many crucial cellular processes. RGS proteins regulate intracellular trafficking and provide vital support for signal transduction. RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. Several RGS proteins can fine-tune immune responses, others RGS proteins play important role in neuronal signals modulation. Some RGS proteins are the principal elements needed for proper vision.


Pssm-ID: 188684  Cd Length: 136  Bit Score: 43.61  E-value: 3.60e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  75 YMERMDKRALISFWESVEHLKNANKNEIPQLVGE-----------------IYQNFFV-ESKEISVEKSLYKEIQQ---C 133
Cdd:cd08729   13 FMDRRNRSQLVQFWLVVEGFKNPLEDTENDYSLDssqsrswidsdkediamIYETYFSdPSPSLNVPKASRDPIRLflnA 92
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 111185509 134 LVGNKGIEVFYK-------IQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08729   93 GVNASPNEQYRKarravlmAQRAVYEEMEEEDFPEFKKSELFYK 136
RGS_SNX13 cd08719
Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 13 (SNX13) protein; ...
62-170 7.61e-05

Regulator of G protein signaling (RGS) domain found in the Sorting Nexin 13 (SNX13) protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the SNX13 (Sorting Nexin 13) protein, a member of the RGS protein family. They are a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. The RGS-domain of SNX13 plays a major role through attenuation of Galphas-mediated signaling and regulates endocytic trafficking and degradation of the epidermal growth factor receptor. Snx13-null mice were embryonic lethal around midgestation which supports an essential role for SNX13 in mouse development and regulation of endocytosis dynamics.


Pssm-ID: 188674  Cd Length: 135  Bit Score: 42.79  E-value: 7.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  62 ILANTFYREHFGMYMERMDKRALISFWESVE---------------------HLKNANKNEIPQLVGEIYQNFFVE--SK 118
Cdd:cd08719    1 ILVNNVALSYFIDFMQSVGGQAYLFFWLTVEgyrvsaeqqlselhlrqrggeHQRSDVYEMLRAAALNIYDQYLSEkaSP 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 111185509 119 EISVEKSLYKEIQQCL-VGNKGIEVFYKIQEDVYETLK--DRYYPSFIVSDLYEK 170
Cdd:cd08719   81 RVPLDDSLVKKLLNRLrNDTPSDLWFDDIQQKVFDIMQedERFYPAFKKSPAYVK 135
PX_PI3K_C2 cd06883
The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases; The ...
320-375 9.77e-05

The phosphoinositide binding Phox Homology Domain of Class II Phosphoinositide 3-Kinases; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. The Phosphoinositide 3-Kinase (PI3K) family of enzymes catalyzes the phosphorylation of the 3-hydroxyl group of the inositol ring of phosphatidylinositol. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They are also involved in the regulation of clathrin-mediated membrane trafficking as well as ATP-dependent priming of neurosecretory granule exocytosis. PI3Ks are divided into three main classes (I, II, and III) based on their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PI as a substrate to produce PI3P, but can also phosphorylate PI4P to produce PI(3,4)P2. They function as monomers and do not associate with any regulatory subunits. Class II enzymes contain an N-terminal Ras binding domain, a lipid binding C2 domain, a PI3K homology domain of unknown function, an ATP-binding cataytic domain, a PX domain, and a second C2 domain at the C-terminus. Class II PI3Ks include three vertebrate isoforms (alpha, beta, and gamma), the Drosophila PI3K_68D, and similar proteins.


Pssm-ID: 132793  Cd Length: 109  Bit Score: 41.96  E-value: 9.77e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 111185509 320 VPRRLSEFQNLHRKLSECVPSLKKVQLPSLSKLPFKSIDQkFMEKSKNQLNKFLQE 375
Cdd:cd06883   34 VFRTFEEFQELHNKLSLLFPSLKLPSFPARVVLGRSHIKQ-VAERRKIELNSYLKS 88
PX_RUN cd07277
The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX ...
318-373 8.19e-04

The phosphoinositide binding Phox Homology domain of uncharacterized proteins containing PX and RUN domains; The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized proteins containing an N-terminal RUN domain and a C-terminal PX domain. PX domain harboring proteins have been implicated in highly diverse functions such as cell signaling, vesicular trafficking, protein sorting, lipid modification, cell polarity and division, activation of T and B cells, and cell survival. In addition to protein-lipid interaction, the PX domain may also be involved in protein-protein interaction. The RUN domain is found in GTPases in the Rap and Rab families and may play a role in Ras-like signaling pathways.


Pssm-ID: 132810  Cd Length: 118  Bit Score: 39.25  E-value: 8.19e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 111185509 318 WTVPRRLSEFQNLHRKLSECVPSLKKVQLPslsklPFKSI---DQKFMEKSKNQLNKFL 373
Cdd:cd07277   32 WNVYRRYSEFYELHKKLKKKFPVVRSFDFP-----PKKAIgnkDAKFVEERRKRLQVYL 85
RGS_RGS2 cd08709
Regulator of G protein signaling (RGS) domain found in the RGS2 protein; The RGS (Regulator of ...
59-170 1.53e-03

Regulator of G protein signaling (RGS) domain found in the RGS2 protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the RGS2 protein. RGS2 is a member of R4/RGS subfamily of RGS family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory roles as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. The RGS domain controls G-protein signaling by accelerating the GTPase activity of the G- alpha subunit which leads to G protein deactivation and promotes desensitization. As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS2 plays important roles in the regulation of blood pressure and the pathogenesis of human hypertension, as well as in bone formation in osteoblasts. Outside of the GPCR pathway RGS2 interacts with calmodulin, beta- COP, tubulin, PKG1-alpha, and TRPV6.


Pssm-ID: 188664  Cd Length: 114  Bit Score: 38.50  E-value: 1.53e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  59 FEDILANTFYREHFGMYMERMDKRALISFWESVEHLKnanKNEIPQLVG----EIYQNFFVES--KEISVEKSLYKEIQQ 132
Cdd:cd08709    1 FDELLASKYGVAAFRAFLKSEFSEENIEFWLACEDFK---KTKSPQKLTskakKIYTDFIEKEapKEINIDFQTKTLIAQ 77
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 111185509 133 CLvGNKGIEVFYKIQEDVYETLKDRYYPSFIVSDLYEK 170
Cdd:cd08709   78 NI-QEATSGCFTAAQKRVYSLMENNSYPRFLESEFYQE 114
PX_IRAS cd06875
The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor ...
293-375 1.61e-03

The phosphoinositide binding Phox Homology domain of the Imidazoline Receptor Antisera-Selected; The PX domain is a phosphoinositide binding (PI) module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. Imidazoline Receptor Antisera-Selected (IRAS), also called nischarin, contains an N-terminal PX domain, leucine rich repeats, and a predicted coiled coil domain. The PX domain of IRAS binds to phosphatidylinositol-3-phosphate in membranes. Together with the coiled coil domain, it is essential for the localization of IRAS to endosomes. IRAS has been shown to interact with integrin and inhibit cell migration. Its interaction with alpha5 integrin causes a redistribution of the receptor from the cell surface to endosomal structures, suggesting that IRAS may function as a sorting nexin (SNX) which regulates the endosomal trafficking of integrin. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132785  Cd Length: 116  Bit Score: 38.41  E-value: 1.61e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509 293 ENGEQLPCYFVMVSlqeVGGVEtknWTVPRRLSEFQNLHRKLsecvpslkkVQLPSLSK--LPFKSI----DQKFMEKSK 366
Cdd:cd06875   12 ETVEGYTVYIIEVK---VGSVE---WTVKHRYSDFAELHDKL---------VAEHKVDKdlLPPKKLignkSPSFVEKRR 76

                 ....*....
gi 111185509 367 NQLNKFLQE 375
Cdd:cd06875   77 KELEIYLQT 85
PX_KIF16B_SNX23 cd06874
The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The ...
318-374 1.82e-03

The phosphoinositide binding Phox Homology domain of KIF16B kinesin or Sorting Nexin 23; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions such as cell signaling, vesicular trafficking, protein sorting, and lipid modification, among others. KIF16B, also called sorting nexin 23 (SNX23), is a family-3 kinesin which harbors an N-terminal kinesin motor domain containing ATP and microtubule binding sites, a ForkHead Associated (FHA) domain, and a C-terminal PX domain. The PX domain of KIF16B binds to phosphatidylinositol-3-phosphate (PI3P) in early endosomes and plays a role in the transport of early endosomes to the plus end of microtubules. By regulating early endosome plus end motility, KIF16B modulates the balance between recycling and degradation of receptors. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway.


Pssm-ID: 132784  Cd Length: 127  Bit Score: 38.52  E-value: 1.82e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 111185509 318 WTVPRRLSEFQNLHRKLSECVPSLKKVQLPslSKLPFKSIDQKFMEKSKNQLNKFLQ 374
Cdd:cd06874   32 WTVFRRYSRFRELHKTMKLKYPEVAALEFP--PKKLFGNKSERVAKERRRQLETYLR 86
PX_SNX19 cd06893
The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a ...
315-375 3.64e-03

The phosphoinositide binding Phox Homology domain of Sorting Nexin 19; The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. SNX19 contains an N-terminal PXA domain, a central PX domain, and a C-terminal domain that is conserved in some SNXs. These domains are also found in SNX13 and SNX14, which also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNX19 interacts with IA-2, a major autoantigen found in type-1 diabetes. It inhibits the conversion of phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2] to PI(3,4,5)P3, which leads in the decrease of protein phosphorylation in the Akt signaling pathway, resulting in apoptosis. SNX19 may also be implicated in coronary heart disease and thyroid oncocytic tumors.


Pssm-ID: 132803 [Multi-domain]  Cd Length: 132  Bit Score: 37.91  E-value: 3.64e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185509 315 TKNWTVPRRLSEFQNLHRKLSEcVPSLKK---VQLPS--LSKLPFKSIDQKFMEKSKNQLNKFLQE 375
Cdd:cd06893   48 LATHTVNRRFREFLTLQTRLEE-NPKFRKimnVKGPPkrLFDLPFGNMDKDKIEARRGLLETFLRQ 112
RGS_Axin cd08707
Regulator of G protein signaling (RGS) domain found in the Axin protein; The RGS (Regulator of ...
72-168 3.95e-03

Regulator of G protein signaling (RGS) domain found in the Axin protein; The RGS (Regulator of G-protein Signaling) domain is an essential part of the Axin protein. Axin is a member of the RA/RGS subfamily of the RGS protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). As a major G-protein regulator, RGS domain containing proteins are involved in many crucial cellular processes such as regulation of intracellular trafficking, glial differentiation, embryonic axis formation, skeletal and muscle development, and cell migration during early embryogenesis. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, and skeletal and muscle development. The RGS domain of Axin is specifically interacts with the heterotrimeric G-alpha12 protein, but not with closely related G-alpha13, and provides a unique tool to regulate G-alpha12-mediated signaling processes. The RGS domain of Axin also interacts with the tumor suppressor protein APC (Adenomatous Polyposis Coli) in order to control the cytoplasmic level of the proto-oncogene, beta-catenin.


Pssm-ID: 188662  Cd Length: 117  Bit Score: 37.44  E-value: 3.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185509  72 FGMYMERMDKRALISFWESVEHLKNANKNE--IPQLVGEIYQNFFVESKEISVE-KSLYKEIQQCLVGNKGIE--VFYKI 146
Cdd:cd08707   14 FRTYLEQEGCADLLDFWFACNGFRKMSDSEekRSKLAKAIYRRYIKDNGIVSRQlKPATKSFIKECIKKQQLDpaMFDQA 93
                         90       100
                 ....*....|....*....|..
gi 111185509 147 QEDVYETLKDRYYPSFIVSDLY 168
Cdd:cd08707   94 QTEIQTTMEENTYPSFLKSDIY 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH