|
Name |
Accession |
Description |
Interval |
E-value |
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
14-455 |
3.03e-123 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 368.09 E-value: 3.03e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVK-YVDLGGSYVGPTQNRILRLAKELGLETYK-VNEVERLIHH 91
Cdd:COG1231 17 LAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGlYAELGAMRIPPSHTNLLALARELGLPLEPfPNENGNALLY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 92 VKGKSYPFRGpfppvwnpiTYLDHNNFWRTMDDMGREIQSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL 171
Cdd:COG1231 97 LGGKRVRAGE---------IAADLRGVAELLAKLLRALAAALDPWAHPAAELDRESLAEWLRRNGASPSARRLLGLLGAG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 172 CVTAETHEVSALWFLWYVKQCGGttriisttnGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLN 251
Cdd:COG1231 168 EYGADPDELSLLDLLRYAASAGG---------GAQQFRIVGGMDQLPRALAAELGDRIRLGAPVTRIRQDGDGVTVTTDD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 252 HEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYtLDDT 331
Cdd:COG1231 239 GGTVRADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGISLTDLPIRQTW-YPSN 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 332 KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGsLEALEPVHYEEKNWCEEQYSGGCYtTYFPPGILTQYG 411
Cdd:COG1231 318 GPDGGAGVLLGYVGGDDARALAALSPEERVAAALEQLARIFG-VYAAEPVDYVSTDWGRDPWSRGAY-AAAPPGQLTAAG 395
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 18490291 412 RVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMG 455
Cdd:COG1231 396 PALAEPDGRIHFAGEHTSDEWPGWVEGALESGERAAAEILARLG 439
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
14-451 |
1.42e-81 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 260.89 E-value: 1.42e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVkYVDLGGSYVGPTQNRILRLAKELGLET---YKVNEVERLIH 90
Cdd:pfam01593 1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGF-LIELGAMWFHGAQPPLLALLKELGLEDrlvLPDPAPFYTVL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 91 HVKGKSYPFRGPFPP-VWNpiTYLDHNNFWrTMDDMGREIQSDAPWKAPLAEEWDNMTMKELLDKLC---------WTES 160
Cdd:pfam01593 80 FAGGRRYPGDFRRVPaGWE--GLLEFGRLL-SIPEKLRLGLAALASDALDEFDLDDFSLAESLLFLGrrgpgdvevWDRL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 161 AKQLATLFVNLCVTA------ETHEVSALWFLWYVKQCGGTTRIIsttnggqerkfVGGSGQVSERI-MDLLGDRVKLER 233
Cdd:pfam01593 157 IDPELFAALPFASGAfagdpsELSAGLALPLLWALLGEGGSLLLP-----------RGGLGALPDALaAQLLGGDVRLNT 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 234 PVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCG 313
Cdd:pfam01593 226 RVRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLGLLG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 314 TMIIDGEEAPVAY---TLDDTKPEGNYAAIMGFI-LAHKARKLARLTKEERLKKLCELYAKVLGSlEALEPVHYEEKNWC 389
Cdd:pfam01593 306 LLSELLTGLGTAFswlTFPNRAPPGKGLLLLVYVgPGDRARELEGLSDEELLQAVLRDLRKLFGE-EAPEPLRVLVSDWH 384
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18490291 390 EEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREIL 451
Cdd:pfam01593 385 TDPWPRGSYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYPGTVEGAIESGRRAARAVL 446
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
14-450 |
1.37e-19 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 91.29 E-value: 1.37e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTlrnqkvKY-----VDLGGSYV-GPTQ-NRILRLAKELGLETYKVNeve 86
Cdd:PLN02268 10 IAGIAAARALHDASFKVTLLESRDRIGGRVHT------DYsfgfpVDMGASWLhGVCNeNPLAPLIGRLGLPLYRTS--- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 87 rlihhvkGKsypfrgpfppvwNPITYlDHNNFWRTMDDM-GREIQSDAPWKaplAEEWDNMTMKE---LLDKLCWTESAK 162
Cdd:PLN02268 81 -------GD------------NSVLY-DHDLESYALFDMdGNQVPQELVTK---VGETFERILEEtekVRDEHEEDMSLL 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 163 QLATLFVN----LCVTAETHEVsalwFLWYVKQCGG----TTRIISTTNGGQERKFVGGSGQVS---ERIMDLL--GDRV 229
Cdd:PLN02268 138 QAISIVLErhpeLRLEGLAHEV----LQWYLCRMEGwfaaDADTISLKSWDQEELLEGGHGLMVrgyDPVINTLakGLDI 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 230 KLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPptLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305
Cdd:PLN02268 214 RLNHRVTKIVRRYNGVKVTVEDGTTFVADAAIIAVP--LGVlkanIIKFEPELPEWKEEAISDLGVGIENKIALHFDSVF 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 306 WRKKDYCGtmIIDGEEAPVAYTLDDTKPEGNyaAIMGFILAHK-ARKLARLTKEERLKKLCELYAKVLGslEALEPVHYE 384
Cdd:PLN02268 292 WPNVEFLG--VVAPTSYGCSYFLNLHKATGH--PVLVYMPAGRlARDIEKLSDEAAANFAMSQLKKMLP--DATEPVQYL 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18490291 385 EKNWCEEQYSGGCYtTYFPPGILTQ-YGRvLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI 450
Cdd:PLN02268 366 VSRWGSDPNSLGCY-SYDLVGKPHDlYER-LRAPVDNLFFAGEATSSDFPGSVHGAYSTGVMAAEEC 430
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
12-83 |
7.82e-04 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 42.13 E-value: 7.82e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18490291 12 GGISGMAAA----KLLHDSGLNVVVLEARDHVGGRTYTlRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVN 83
Cdd:TIGR00562 10 GGISGLCAAyyleKEIPELPVELTLVEASDRVGGKIQT-VKEDGYLIERGPDSFLERKKSAPDLVKDLGLEHVLVS 84
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
14-455 |
3.03e-123 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 368.09 E-value: 3.03e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVK-YVDLGGSYVGPTQNRILRLAKELGLETYK-VNEVERLIHH 91
Cdd:COG1231 17 LAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGlYAELGAMRIPPSHTNLLALARELGLPLEPfPNENGNALLY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 92 VKGKSYPFRGpfppvwnpiTYLDHNNFWRTMDDMGREIQSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL 171
Cdd:COG1231 97 LGGKRVRAGE---------IAADLRGVAELLAKLLRALAAALDPWAHPAAELDRESLAEWLRRNGASPSARRLLGLLGAG 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 172 CVTAETHEVSALWFLWYVKQCGGttriisttnGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLN 251
Cdd:COG1231 168 EYGADPDELSLLDLLRYAASAGG---------GAQQFRIVGGMDQLPRALAAELGDRIRLGAPVTRIRQDGDGVTVTTDD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 252 HEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYtLDDT 331
Cdd:COG1231 239 GGTVRADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGISLTDLPIRQTW-YPSN 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 332 KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGsLEALEPVHYEEKNWCEEQYSGGCYtTYFPPGILTQYG 411
Cdd:COG1231 318 GPDGGAGVLLGYVGGDDARALAALSPEERVAAALEQLARIFG-VYAAEPVDYVSTDWGRDPWSRGAY-AAAPPGQLTAAG 395
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 18490291 412 RVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMG 455
Cdd:COG1231 396 PALAEPDGRIHFAGEHTSDEWPGWVEGALESGERAAAEILARLG 439
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
14-451 |
1.42e-81 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 260.89 E-value: 1.42e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVkYVDLGGSYVGPTQNRILRLAKELGLET---YKVNEVERLIH 90
Cdd:pfam01593 1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGF-LIELGAMWFHGAQPPLLALLKELGLEDrlvLPDPAPFYTVL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 91 HVKGKSYPFRGPFPP-VWNpiTYLDHNNFWrTMDDMGREIQSDAPWKAPLAEEWDNMTMKELLDKLC---------WTES 160
Cdd:pfam01593 80 FAGGRRYPGDFRRVPaGWE--GLLEFGRLL-SIPEKLRLGLAALASDALDEFDLDDFSLAESLLFLGrrgpgdvevWDRL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 161 AKQLATLFVNLCVTA------ETHEVSALWFLWYVKQCGGTTRIIsttnggqerkfVGGSGQVSERI-MDLLGDRVKLER 233
Cdd:pfam01593 157 IDPELFAALPFASGAfagdpsELSAGLALPLLWALLGEGGSLLLP-----------RGGLGALPDALaAQLLGGDVRLNT 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 234 PVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCG 313
Cdd:pfam01593 226 RVRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLGLLG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 314 TMIIDGEEAPVAY---TLDDTKPEGNYAAIMGFI-LAHKARKLARLTKEERLKKLCELYAKVLGSlEALEPVHYEEKNWC 389
Cdd:pfam01593 306 LLSELLTGLGTAFswlTFPNRAPPGKGLLLLVYVgPGDRARELEGLSDEELLQAVLRDLRKLFGE-EAPEPLRVLVSDWH 384
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18490291 390 EEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREIL 451
Cdd:pfam01593 385 TDPWPRGSYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYPGTVEGAIESGRRAARAVL 446
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
14-450 |
1.37e-19 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 91.29 E-value: 1.37e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTlrnqkvKY-----VDLGGSYV-GPTQ-NRILRLAKELGLETYKVNeve 86
Cdd:PLN02268 10 IAGIAAARALHDASFKVTLLESRDRIGGRVHT------DYsfgfpVDMGASWLhGVCNeNPLAPLIGRLGLPLYRTS--- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 87 rlihhvkGKsypfrgpfppvwNPITYlDHNNFWRTMDDM-GREIQSDAPWKaplAEEWDNMTMKE---LLDKLCWTESAK 162
Cdd:PLN02268 81 -------GD------------NSVLY-DHDLESYALFDMdGNQVPQELVTK---VGETFERILEEtekVRDEHEEDMSLL 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 163 QLATLFVN----LCVTAETHEVsalwFLWYVKQCGG----TTRIISTTNGGQERKFVGGSGQVS---ERIMDLL--GDRV 229
Cdd:PLN02268 138 QAISIVLErhpeLRLEGLAHEV----LQWYLCRMEGwfaaDADTISLKSWDQEELLEGGHGLMVrgyDPVINTLakGLDI 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 230 KLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPptLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305
Cdd:PLN02268 214 RLNHRVTKIVRRYNGVKVTVEDGTTFVADAAIIAVP--LGVlkanIIKFEPELPEWKEEAISDLGVGIENKIALHFDSVF 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 306 WRKKDYCGtmIIDGEEAPVAYTLDDTKPEGNyaAIMGFILAHK-ARKLARLTKEERLKKLCELYAKVLGslEALEPVHYE 384
Cdd:PLN02268 292 WPNVEFLG--VVAPTSYGCSYFLNLHKATGH--PVLVYMPAGRlARDIEKLSDEAAANFAMSQLKKMLP--DATEPVQYL 365
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18490291 385 EKNWCEEQYSGGCYtTYFPPGILTQ-YGRvLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREI 450
Cdd:PLN02268 366 VSRWGSDPNSLGCY-SYDLVGKPHDlYER-LRAPVDNLFFAGEATSSDFPGSVHGAYSTGVMAAEEC 430
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
14-456 |
1.43e-15 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 78.99 E-value: 1.43e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGL-NVVVLEARDHVGGRTYTLRNQKVKyVDLGGSYV----GPTQNRILRLAKELGLETYKVN--EVE 86
Cdd:PLN02676 36 MSGISAAKTLSEAGIeDILILEATDRIGGRMRKANFAGVS-VELGANWVegvgGPESNPIWELANKLKLRTFYSDfdNLS 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 87 RLIHHVKGKSYPFRgpfpPVWNPITYLDhnnfwrTMDDMGREIQSDAPWKAplAEEWDNMTMKELLDKLCWTEsakqlat 166
Cdd:PLN02676 115 SNIYKQDGGLYPKK----VVQKSMKVAD------ASDEFGENLSISLSAKK--AVDISILTAQRLFGQVPKTP------- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 167 lfVNLCVT--------AETHEVSALwflwyvkqcgGTTRIIST-TNGGQERKFVGGSGQVSERIMDLLGD---------- 227
Cdd:PLN02676 176 --LEMVIDyynydyefAEPPRVTSL----------KNTEPNPTfVDFGEDEYFVADPRGYESLVYYLAEQflstksgkit 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 228 --RVKLERPVIYIDQTRENVLVETLNHEMYEAKYVIsaIPPTLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCIVYY 301
Cdd:PLN02676 244 dpRLKLNKVVREISYSKNGVTVKTEDGSVYRAKYVI--VSVSLGVlqsdLIKFKPPLPDWKIEAIYQFDMAVYTKIFLKF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 302 KEPFWrkkdycgtmiidgeeapvaytlddtkPEGNYAAImgFILAHKARK------------------LARLTKEE--RL 361
Cdd:PLN02676 322 PYKFW--------------------------PSGPGTEF--FLYAHERRGyypfwqhleneypgsnvlFVTVTDEEsrRI 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 362 KKLC--ELYAKVLGSLEAL------EPVHYEEKNWCEEQYSGGCYTTYfPPGILTQYGRVLRQPVDRIYFAGTETATHWS 433
Cdd:PLN02676 374 EQQPdsETKAEIMEVLRKMfgpnipEATDILVPRWWSNRFFKGSYSNW-PIGVSRYEFDQIRAPVGRVYFTGEHTSEKYN 452
|
490 500
....*....|....*....|...
gi 18490291 434 GYMEGAVEAGERAAREILHAMGK 456
Cdd:PLN02676 453 GYVHGAYLAGIDTANDLLECIKK 475
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
14-454 |
4.19e-15 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 77.57 E-value: 4.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVKyVDLGG-SYVgPTQNRILRLAKELGLET--YKVNEVERLIH 90
Cdd:COG1232 11 IAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVEVDGFR-IDRGPhSFL-TRDPEVLELLRELGLGDelVWPNTRKSYIY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 91 HvKGKSYPF-RGPFPPVWNPItyLDhnnfWRTMDDMGREIQsdAPWKAPLAEE--------------WDNMtMKELLDKL 155
Cdd:COG1232 89 Y-GGKLHPLpQGPLALLRSPL--LS----LAGKLRALLELL--APRRPPGEDEslaefvrrrfgrevYERL-VEPLLEGV 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 156 cWTESAKQLatlfvnlcvtaethevSALWFLWYVKQ---------CGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLG 226
Cdd:COG1232 159 -YAGDPDEL----------------SADWAFPRLKRlelehgsliKGALALRKGAKAGEVFGYLRGGLGTLVEALAEALE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 227 D-RVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIhFNPPLPMMRnQMITRVPLGSVIkcIVY--YKE 303
Cdd:COG1232 222 AgEIRLGTRVTAIEREGGGWRVTTSDGETIEADAVVSATPAPALARL-LAPLPPEVA-AALAGIPYASVA--VVAlgFDR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 304 PFWRKKDYCGTMIIDGEEAPV-AYTLDDTK-----PEGnYAAIMGFILAHKARKLARLTKEerlkklcELYAKVLGSLEA 377
Cdd:COG1232 298 PDLPPPDGFGWLVPRDEGVPIlAVTFSSNKwphraPDG-KVLLRLEVGGAGDPELWQLSDE-------ELVALALADLRK 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 378 L-----EPVHYEEKNWcEE---QYSGGcYTTYFPPgiltqygrvLRQPVDR---IYFAGtetathwSGY----MEGAVEA 442
Cdd:COG1232 370 LlgidaEPVDTRVVRW-PKaypQYTVG-HLERVAA---------IREALAAlpgLYLAG-------RAYdgvgLPDCIRS 431
|
490
....*....|..
gi 18490291 443 GERAAREILHAM 454
Cdd:COG1232 432 GREAAERILAEL 443
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
14-453 |
5.33e-11 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 65.43 E-value: 5.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLR---NQKVKYVDLGGSYV-GPTQNRILRLAKELGLETYKVNEVERLi 89
Cdd:PLN03000 194 LSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKmeaNRVGAAADLGGSVLtGTLGNPLGIIARQLGSSLYKVRDKCPL- 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 90 HHVKGKsypfrgPFPPVWNPITYLDHNNFWRTMDDMgREIQSDAPWKAPLAEEWdnmtmkELLDKLCWTESAKQLATLF- 168
Cdd:PLN03000 273 YRVDGK------PVDPDVDLKVEVAFNQLLDKASKL-RQLMGDVSMDVSLGAAL------ETFRQVSGNDVATEEMGLFn 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 169 ---VNLcVTAETHEVSALWFLWYVKQcggttriISTTNGGQERKFVGGSGqvseRIMDLLGDRVKL--ERPVIYIDQTRE 243
Cdd:PLN03000 340 whlANL-EYANAGLVSKLSLAFWDQD-------DPYDMGGDHCFLPGGNG----RLVQALAENVPIlyEKTVQTIRYGSN 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 244 NVLVeTLNHEMYEAKYVISAIPptLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK-DYCGTMIID 318
Cdd:PLN03000 408 GVKV-IAGNQVYEGDMVLCTVP--LGVlkngSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVFWSTDlDTFGHLTED 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 319 GEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVL--GSLEALEPVHYEEKNWCEEQYSGG 396
Cdd:PLN03000 485 PNYRGEFFLFYSYAPVAGGPLLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYepQGINVPDPLQTVCTRWGGDPFSLG 564
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 18490291 397 CYTTYFPPGILTQYGrVLRQPV--DRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453
Cdd:PLN03000 565 SYSNVAVGASGDDYD-ILAESVgdGRLFFAGEATTRRYPATMHGAFVTGLREAANMAQS 622
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
14-75 |
7.99e-11 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 57.54 E-value: 7.99e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVKyVDLGGSYV-GPTQNRILRLAKEL 75
Cdd:pfam13450 6 LAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYV-FDYGAHIFhGSDEPNVRDLLDEL 67
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
14-451 |
1.21e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 63.37 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGG--RTYTLRNQKV-KYvdlggsY--VGPTQNRILRLAKELGLEtykvnevERL 88
Cdd:PRK07233 9 IAGLAAAYRLAKRGHEVTVFEADDQLGGlaASFEFGGLPIeRF------YhhIFKSDEALLELLDELGLE-------DKL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 89 I-------HHVKGKSYPFRGP-----FPPvWNPIT---------YLDHNNFWRTMDDMGreiqsdapwkaplAEEWdnmt 147
Cdd:PRK07233 76 RwretktgYYVDGKLYPLGTPlellrFPH-LSLIDkfrlglltlLARRIKDWRALDKVP-------------AEEW---- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 148 MKELLDKLCWTESAKQL--ATLFVNlcvtaeTHEVSALWFLWYVKQCGGttriiSTTNGGQERK--FVGGSGQVSERIMD 223
Cdd:PRK07233 138 LRRWSGEGVYEVFWEPLleSKFGDY------ADDVSAAWLWSRIKRRGN-----RRYSLFGEKLgyLEGGFATLIDALAE 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 224 LLGDR---VKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIhfNPPLPMMRNQMITRVP-LGSVikC-I 298
Cdd:PRK07233 207 AIEARggeIRLGTPVTSVVIDGGGVTGVEVDGEEEDFDAVISTAPPPILARL--VPDLPADVLARLRRIDyQGVV--CmV 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 299 VYYKEP----FWrkkdycgTMIIDgEEAP----VAYT-LDDTKPEGNY--AAIMGFILAHKArkLARLTKEerlkklcEL 367
Cdd:PRK07233 283 LKLRRPltdyYW-------LNIND-PGAPfggvIEHTnLVPPERYGGEhlVYLPKYLPGDHP--LWQMSDE-------EL 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 368 YAKVLGSLEALEP-VHYEEKNWCE---EQYSGGCYTTYF----PPgiltqygrvLRQPVDRIYFAGTETATHWSGYMEGA 439
Cdd:PRK07233 346 LDRFLSYLRKMFPdFDRDDVRAVRisrAPYAQPIYEPGYldkiPP---------YDTPIEGLYLAGMSQIYPEDRSINGS 416
|
490
....*....|..
gi 18490291 440 VEAGERAAREIL 451
Cdd:PRK07233 417 VRAGRRVAREIL 428
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
12-456 |
2.73e-09 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 59.48 E-value: 2.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 12 GGISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVKyVDLGGSYVGPTQ--NRILRlakELGLETYkvneverli 89
Cdd:COG1233 11 AGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFR-FDVGPSVLTMPGvlERLFR---ELGLEDY--------- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 90 hhvkgksYPFRgPFPPVWNPI----TYLDhnnFWRTMDDMGREIQSDAP------------------------WKAPLAE 141
Cdd:COG1233 78 -------LELV-PLDPAYRVPfpdgRALD---LPRDLERTAAELERLFPgdaeayrrflaelrrlydalledlLYRPLLS 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 142 EWD--------------NMTMKELLDKlcWTESAKqLATLF--VNLCVTAETHEVSAL-WFLWYVKQCGGTTRIisttng 204
Cdd:COG1233 147 LRDllrplalarllrllLRSLRDLLRR--YFKDPR-LRALLagQALYLGLSPDRTPALyALIAYLEYAGGVWYP------ 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 205 gqerkfVGGSGQVSERIMDL---LGDRVKLERPV--IYIDQTREnVLVETLNHEMYEAKYVISAI-PPTLGMKIHFNPPL 278
Cdd:COG1233 218 ------KGGMGALADALARLaeeLGGEIRTGAEVerILVEGGRA-TGVRLADGEEIRADAVVSNAdPAHTYLRLLGEEAL 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 279 PMMRNQMITRVPLG-SVIKciVYY--KEP--------FWRKKDYCGTM--IIDGE--EAPVAY----TLDDTK--PEGnY 337
Cdd:COG1233 291 PARYRRRLERFRYSpSAFK--LYLglDGPlpglahhtIHLSEDYEAAFddIFRGRlpEDPSLYvsipSLTDPSlaPEG-K 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 338 AAImgFILAHKARKLARLTKEER-------LKKLCELYAKVLGSLEALE---PVHYEEKNWCEE--QYSGGC---YTTYF 402
Cdd:COG1233 368 HTL--WVLVPVPYGLEDAWDELKeeyaeriLARLERYAPGLRDRIVAREvltPLDFERYLNLVGgaIYGGAHtldQSAFF 445
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 18490291 403 PPGIltqygrvLRQPVDRIYFAGteTATHWSGYMEGAVEAGERAAREILHAMGK 456
Cdd:COG1233 446 RPSN-------YRTPIPGLYLVG--ASTHPGGGVPGVLISGRLAARRILKDLKR 490
|
|
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
14-451 |
1.20e-08 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 57.69 E-value: 1.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQK---VKYVDLGGSYV-GPTQNRILRLAKELGLETYKVNEVerli 89
Cdd:PLN02328 248 LAGLVAARQLLSMGFKVVVLEGRARPGGRVKTMKMKGdgvVAAADLGGSVLtGINGNPLGVLARQLGLPLHKVRDI---- 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 90 hhvkgksypfrgpfPPVWNPityldhnnfwrtmDDMGREIQSDAPWKAplaeewdnmTMKELLDKLCWTESA--KQLATL 167
Cdd:PLN02328 324 --------------CPLYLP-------------DGKAVDAEIDSKIEA---------SFNKLLDRVCKLRQAmiEEVKSV 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 168 FVNLCVTAET----HEVSA--------LWFLWYVKQCGGTtrIISTTN-----------GGQERKFVGGSGQ--VSERIM 222
Cdd:PLN02328 368 DVNLGTALEAfrhvYKVAEdpqermllNWHLANLEYANAS--LMSNLSmaywdqddpyeMGGDHCFIPGGNDtfVRELAK 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 223 DLlgdRVKLERPVIYIDQTRENVLVETLNHEmYEAKYVISAIPptLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCI 298
Cdd:PLN02328 446 DL---PIFYERTVESIRYGVDGVIVYAGGQE-FHGDMVLCTVP--LGVlkkgSIEFYPELPQRKKDAIQRLGYGLLNKVA 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 299 VYYKEPFWrkkdycgtmiiDGEEAPVAYTLDDTKPEG------NYAAIMG------FILAHKARKLARLTKEERLKklce 366
Cdd:PLN02328 520 LLFPYNFW-----------GGEIDTFGHLTEDPSMRGefflfySYSSVSGgplliaLVAGDAAVKFETLSPVESVK---- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 367 lyaKVLGSLEAL---------EPVHYEEKNWCEEQYSGGCYtTYFPPGILTQYGRVLRQPV--DRIYFAGTETATHWSGY 435
Cdd:PLN02328 585 ---RVLQILRGIfhpkgivvpDPVQAVCTRWGKDCFTYGSY-SYVAVGSSGDDYDILAESVgdGRVFFAGEATNKQYPAT 660
|
490
....*....|....*.
gi 18490291 436 MEGAVEAGERAAREIL 451
Cdd:PLN02328 661 MHGAFLSGMREAANIL 676
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
14-453 |
1.21e-07 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 54.51 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLR-NQKVKY--VDLGGSYV-GPTQNRILRLAKELGLEtykvneverlI 89
Cdd:PLN02529 170 LAGLAAARQLLSFGFKVVVLEGRNRPGGRVYTQKmGRKGQFaaVDLGGSVItGIHANPLGVLARQLSIP----------L 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 90 HHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMG--REIQSDAPwkaplaeewDNMTMKELLDKLcwtesaKQLATl 167
Cdd:PLN02529 240 HKVRDNCPLYKPDGALVDKEIDSNIEFIFNKLLDKVTelRQIMGGFA---------NDISLGSVLERL------RQLYG- 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 168 fvnlcvTAETHEVSALwFLWYVKQC----GGTTRIISTTNGGQERKFVGGSGQV-----SERIMDLLGDRVklerPVIY- 237
Cdd:PLN02529 304 ------VARSTEERQL-LDWHLANLeyanAGCLSDLSAAYWDQDDPYEMGGDHCflaggNWRLINALCEGV----PIFYg 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 238 -----IDQTRENVLVeTLNHEMYEAKYVISAIPptLGM----KIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWrk 308
Cdd:PLN02529 373 ktvdtIKYGNDGVEV-IAGSQVFQADMVLCTVP--LGVlkkrTIRFEPELPRRKLAAIDRLGFGLLNKVAMVFPSVFW-- 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 309 kdycgtmiidGEEAPVAYTLDD-TKPEGNYAAIMGFILAHKARKLARLTKEERLKKL-----CELYAKVLGSLEAL---- 378
Cdd:PLN02529 448 ----------GEELDTFGCLNEsSNKRGEFFLFYGYHTVSGGPALVALVAGEAAQRFentdpSTLLHRVLSVLRGIynpk 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 379 -----EPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHA 453
Cdd:PLN02529 518 ginvpDPIQTICTRWGSDPLSYGSYSHVRVQSSGSDYDILAESVSGRLFFAGEATTRQYPATMHGAFLSGLREASRILHV 597
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
14-455 |
1.53e-07 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 53.70 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQkvkyvDLGGS-------YVGPTQNrILRLAKELGLETYKVnEVE 86
Cdd:COG3349 13 LAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDP-----DTGLPidngqhvLLGCYRN-TLDLLRRIGAADNLV-GPE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 87 RL-IHHVKGKSYPFR-GPFPPVWNPITYL---------DHNNFWRTMddmgreiqsdAPWKAPLAEEWDNMTMKELLDKL 155
Cdd:COG3349 86 PLqFPLPGGRRWTLRaPRLPAPLHLLRALlrapglslaDRLALLRLL----------TACRERRWRELDDISVADWLRRH 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 156 CWTEsakQLATLFVN-LCVTA---ETHEVSALWFLwyvkqcggttRIIsttnggqeRKFVGGSGQVSE-RIM-----DLL 225
Cdd:COG3349 156 GQSP---RLIRRLWEpLLLAAlntPPEQASARLAL----------TVL--------RETLLAGPAASDlLVPrgplsELF 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 226 GD-----------RVKLERPVIYIDQTRENV-LVETLNHEMYEAKYVISAIPPTlGMKihfnPPLPMMRNQMITR--VPL 291
Cdd:COG3349 215 VDpalaylearggEVRLGTRVRALEFDGGRVtGLVLADGETVPADAVVLAVPPE-VAA----RLLPELARLPELGllAPL 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 292 GSVIKCIVYykepFW--RKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHkARKLARLTKEERLKKLCELYA 369
Cdd:COG3349 290 EYSPIVNVH----LWldRPVTLGPPPFAGLVGSTSQWVFDRGAGDGGQGGVLSVVISA-ADRLLDLSREELAAEVWAELA 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 370 KVLGSLEALEPVHYE---EKNwceeqysggcYTTYFPPGiltQYGRVLRQ--PVDRIYFAGTETATHWSGYMEGAVEAGE 444
Cdd:COG3349 365 ALLPAAREALPVWSRvvrEKR----------ATFAATPG---SDRLRPGArtPIPNLFLAGDWTATGLPATMEGAVRSGR 431
|
490
....*....|.
gi 18490291 445 RAAREILHAMG 455
Cdd:COG3349 432 RAANAILARLG 442
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
15-59 |
1.30e-05 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 48.33 E-value: 1.30e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 18490291 15 SGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVKYVDLGGS 59
Cdd:PLN02976 704 AGLTAARHLQRQGFSVTVLEARSRIGGRVYTDRSSLSVPVDLGAS 748
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
14-97 |
2.26e-04 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 43.68 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLN--VVVLEARDHVGGRTYTLRnQKVKYVDLGG-SYVGptqnR---ILRLAKELGLEtykvnevER 87
Cdd:PRK11883 10 ITGLSAAYRLHKKGPDadITLLEASDRLGGKIQTVR-KDGFPIELGPeSFLA----RkpsAPALVKELGLE-------DE 77
|
90
....*....|
gi 18490291 88 LIHHVKGKSY 97
Cdd:PRK11883 78 LVANTTGQSY 87
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
12-83 |
7.82e-04 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 42.13 E-value: 7.82e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18490291 12 GGISGMAAA----KLLHDSGLNVVVLEARDHVGGRTYTlRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVN 83
Cdd:TIGR00562 10 GGISGLCAAyyleKEIPELPVELTLVEASDRVGGKIQT-VKEDGYLIERGPDSFLERKKSAPDLVKDLGLEHVLVS 84
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
14-79 |
1.21e-03 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 41.25 E-value: 1.21e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18490291 14 ISGMAAAKLLHDSgLNVVVLEARDHVGGRTYTLRnqkvkyVDLGGSYVG----------PTQNRILRLAKELGLET 79
Cdd:COG2907 13 ISGLTAAWLLSRR-HDVTLFEANDRLGGHTHTVD------VDLDGRTVPvdtgfivfneRTYPNLTALFAELGVPT 81
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
14-49 |
5.82e-03 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 39.18 E-value: 5.82e-03
10 20 30
....*....|....*....|....*....|....*.
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQ 49
Cdd:TIGR02734 8 FGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLEDD 43
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
14-86 |
8.88e-03 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 38.52 E-value: 8.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18490291 14 ISGMAAAKLLHDSGLNVVVLEARDHVGGRTYTLRNQKVKYVdLGGSYVG--------------PTQNRILRLAKELGLET 79
Cdd:COG0771 14 KSGLAAARLLAKLGAEVTVSDDRPAPELAAAELEAPGVEVV-LGEHPEElldgadlvvkspgiPPDHPLLKAARAAGIPV 92
|
....*..
gi 18490291 80 ykVNEVE 86
Cdd:COG0771 93 --IGEIE 97
|
|
| |
