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Conserved domains on  [gi|9294724|gb|AAF86637|]
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homeodomain protein DLX5 variant [Mus musculus]

Protein Classification

DLL_N domain-containing protein( domain architecture ID 10575143)

DLL_N domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DLL_N pfam12413
Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and ...
 32-118 4.39e-15

Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and is approximately 80 amino acids in length. The family is found in association with pfam00046. This family is the N terminal of a homeobox protein involved in embryonic development and adult neural regeneration.


:

Pssm-ID: 463567  Cd Length: 83  Bit Score: 65.92  E-value: 4.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9294724     32 QESPTLPESSATDSDYYSPAgaAPHGYCSPTSASYGKALNPYQYQYHGVNGSAAGYPAKAYaDYGYASPYHQYgGAYNRV 111
Cdd:pfam12413   1 QDSPTLPESSATDSGYYSPQ--QQHYYGSCAGQPYGQPLNSYQYFNLNGMNGTGAYSTKAY-EYGYNTSYRQY-GAYGRS 76


                  ....*..
gi 9294724    112 PSATSQP 118
Cdd:pfam12413  77 QSPPPQD 83
 
Name Accession Description Interval E-value
DLL_N pfam12413
Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and ...
 32-118 4.39e-15

Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and is approximately 80 amino acids in length. The family is found in association with pfam00046. This family is the N terminal of a homeobox protein involved in embryonic development and adult neural regeneration.


Pssm-ID: 463567  Cd Length: 83  Bit Score: 65.92  E-value: 4.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9294724     32 QESPTLPESSATDSDYYSPAgaAPHGYCSPTSASYGKALNPYQYQYHGVNGSAAGYPAKAYaDYGYASPYHQYgGAYNRV 111
Cdd:pfam12413   1 QDSPTLPESSATDSGYYSPQ--QQHYYGSCAGQPYGQPLNSYQYFNLNGMNGTGAYSTKAY-EYGYNTSYRQY-GAYGRS 76


                  ....*..
gi 9294724    112 PSATSQP 118
Cdd:pfam12413  77 QSPPPQD 83
 
Name Accession Description Interval E-value
DLL_N pfam12413
Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and ...
 32-118 4.39e-15

Homeobox protein distal-less-like N terminal; This domain family is found in eukaryotes, and is approximately 80 amino acids in length. The family is found in association with pfam00046. This family is the N terminal of a homeobox protein involved in embryonic development and adult neural regeneration.


Pssm-ID: 463567  Cd Length: 83  Bit Score: 65.92  E-value: 4.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9294724     32 QESPTLPESSATDSDYYSPAgaAPHGYCSPTSASYGKALNPYQYQYHGVNGSAAGYPAKAYaDYGYASPYHQYgGAYNRV 111
Cdd:pfam12413   1 QDSPTLPESSATDSGYYSPQ--QQHYYGSCAGQPYGQPLNSYQYFNLNGMNGTGAYSTKAY-EYGYNTSYRQY-GAYGRS 76


                  ....*..
gi 9294724    112 PSATSQP 118
Cdd:pfam12413  77 QSPPPQD 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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