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Conserved domains on  [gi|182701408|sp|A8MPS7|]
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RecName: Full=Carbohydrate deacetylase

Protein Classification

carbohydrate deacetylase( domain architecture ID 10180661)

carbohydrate deacetylase catalyzes the deacetylation of acetylated carbohydrates such as chitooligosaccharides at the nonreducing N-acetylglucosamine residue, an important step in the degradation of oligosaccharides

CATH:  3.20.20.370
EC:  3.5.1.-
Gene Symbol:  YDJC
Gene Ontology:  GO:0019213|GO:0000287|GO:0005975
PubMed:  21639842
SCOP:  4002068

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YdjC_like_2 cd10806
uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains ...
7-286 1.59e-176

uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains hypothetical and uncharacterized proteins, and belongs to the YdjC-like family of uncharacterized proteins. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


:

Pssm-ID: 212117  Cd Length: 280  Bit Score: 489.53  E-value: 1.59e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPE 86
Cdd:cd10806    1 KLVVNADDFGYCPQRNRGIVECFLAGVVTSVSLLVNGSSAEDAAKLAKRHNIPIGLHLNLTEGRPVSDELRGVSSLLGKD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  87 GFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLERG 166
Cdd:cd10806   81 GFFLGKMGFREALKQGDIDMSEVRIEIRAQIAWFIELLGRLPTHVDGHQHVHVLPGVREVFAEVLQEFGIKKTRIPVELG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 167 VGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTCGRHMSAHRVSGALARVLEGTLAGHTLTAELMAHP 246
Cdd:cd10806  161 LESCNWIEEARREFYKGVEEDALEAVKIFSSHGIRWTDYFIGLSTMGKNMTEQRLQSSLITFKKSKPASRSVTCELMVHP 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 182701408 247 GYPSVPPTGGCGEGPDAFSCSWERLHELRVLTAPTLRAQL 286
Cdd:cd10806  241 GYPSVNGCGGCGEGPDDFSQSPDREHELKVLTSPSLRNFL 280
 
Name Accession Description Interval E-value
YdjC_like_2 cd10806
uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains ...
7-286 1.59e-176

uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains hypothetical and uncharacterized proteins, and belongs to the YdjC-like family of uncharacterized proteins. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


Pssm-ID: 212117  Cd Length: 280  Bit Score: 489.53  E-value: 1.59e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPE 86
Cdd:cd10806    1 KLVVNADDFGYCPQRNRGIVECFLAGVVTSVSLLVNGSSAEDAAKLAKRHNIPIGLHLNLTEGRPVSDELRGVSSLLGKD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  87 GFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLERG 166
Cdd:cd10806   81 GFFLGKMGFREALKQGDIDMSEVRIEIRAQIAWFIELLGRLPTHVDGHQHVHVLPGVREVFAEVLQEFGIKKTRIPVELG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 167 VGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTCGRHMSAHRVSGALARVLEGTLAGHTLTAELMAHP 246
Cdd:cd10806  161 LESCNWIEEARREFYKGVEEDALEAVKIFSSHGIRWTDYFIGLSTMGKNMTEQRLQSSLITFKKSKPASRSVTCELMVHP 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 182701408 247 GYPSVPPTGGCGEGPDAFSCSWERLHELRVLTAPTLRAQL 286
Cdd:cd10806  241 GYPSVNGCGGCGEGPDDFSQSPDREHELKVLTSPSLRNFL 280
ChbG COG3394
Chitooligosaccharide deacetylase ChbG, YdjC/CelG family [Carbohydrate transport and metabolism] ...
6-299 1.45e-66

Chitooligosaccharide deacetylase ChbG, YdjC/CelG family [Carbohydrate transport and metabolism];


Pssm-ID: 442621  Cd Length: 271  Bit Score: 209.78  E-value: 1.45e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   6 MRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARRgASSLLG 84
Cdd:COG3394    1 KKLIVNADDFGLSPGVNEAIIEAHREGILTSTSLMVNGPAFPEAAALARENpGLDVGLHLTLTSGRPLTPPEE-VPSLVD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  85 PEGFFLGKMG-FREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPL 163
Cdd:COG3394   80 EDGRFFPSLGrLGVRAFLGRADLDEVEAELRAQIERFLA-AGLPPTHLDSHQHVHLHPGVLEAVLDLAKEYGLPAVRLPR 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 164 ErgvggctwlEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTcGRHMSAHRVSGALARVLEGtlaghtlTAELM 243
Cdd:COG3394  159 E---------PAPAILRRPGLAALARGARRRARRAGLPTNDGFFGLFY-SGKMTEERLLRLLDALPPG-------VTEIM 221
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 182701408 244 AHPGYPSvpptggcGEGPDAFSCSWERLHELRVLTAPTLRAQLAQDGVQLCALDDL 299
Cdd:COG3394  222 CHPGFVD-------PELRAISSYTYPREAELAALTSPEVKEALEERGIELITYRDL 270
YdjC pfam04794
YdjC-like protein; Family of YdjC-like proteins. This region is possibly involved in the the ...
7-151 4.20e-49

YdjC-like protein; Family of YdjC-like proteins. This region is possibly involved in the the cleavage of cellobiose-phosphate.


Pssm-ID: 461430  Cd Length: 187  Bit Score: 162.37  E-value: 4.20e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408    7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIpTGLHANLSEGRPVGPaRRGASSLLGPE 86
Cdd:pfam04794   1 RLIINADDFGLSPGVNRAIIELLEAGILTSTSLMVNGPAAPEAAALAKAAPA-LGLHLTLTSGKPLLP-PEEVPSLVDED 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 182701408   87 GFFlgkmgFREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEAL 151
Cdd:pfam04794  79 GRF-----FGFRYLLRRLDLAEVEREIRAQIERFLD-LGLPPDHVDGHQHVHVLPGVREALLDLA 137
PRK02134 PRK02134
chitin disaccharide deacetylase;
6-299 5.88e-42

chitin disaccharide deacetylase;


Pssm-ID: 235007  Cd Length: 249  Bit Score: 145.86  E-value: 5.88e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   6 MRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARrgasSLLG 84
Cdd:PRK02134   3 RLLIVNADDFGLSKGQNYGIIEAHRNGVVTSTTAMVNMPAIDHAVQLSREYpSLGVGMHFVLTAGKPLTAMP----SLTD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  85 PEGFFlGKMgFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVrftrlPLe 164
Cdd:PRK02134  79 RDGLL-GKW-IWQLAEEGTLPLEEIAQELAAQYERFLSLFGRKPTHLDSHHHVHMLPQIFPIVARFAAEYGV-----PL- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 165 RGVGGCTWLEAPARafacaverdaraavgpFSRHglrWTDAFVGlstcgrhmsaHRVSGAL-ARVLEGTLAGHTLTAELM 243
Cdd:PRK02134 151 RIDSNAGDLPANLR----------------SSDG---FSSDFYG----------EEVSEDLfLQLLDRSKHRGEQSLEVM 201
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 182701408 244 AHPGY--PSVPPTGGCgegpdafscsWERLHELRVLTAPTLRAQLAQDGVQLCALDDL 299
Cdd:PRK02134 202 CHPAFidNTLRQSAYC----------YPRLTELEVLTSASLKEAIAERGYRLGSYLDL 249
 
Name Accession Description Interval E-value
YdjC_like_2 cd10806
uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains ...
7-286 1.59e-176

uncharacterized YdjC-like family proteins from eukaryotes; This eukaryotic subfamily contains hypothetical and uncharacterized proteins, and belongs to the YdjC-like family of uncharacterized proteins. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


Pssm-ID: 212117  Cd Length: 280  Bit Score: 489.53  E-value: 1.59e-176
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGRPVGPARRGASSLLGPE 86
Cdd:cd10806    1 KLVVNADDFGYCPQRNRGIVECFLAGVVTSVSLLVNGSSAEDAAKLAKRHNIPIGLHLNLTEGRPVSDELRGVSSLLGKD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  87 GFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLERG 166
Cdd:cd10806   81 GFFLGKMGFREALKQGDIDMSEVRIEIRAQIAWFIELLGRLPTHVDGHQHVHVLPGVREVFAEVLQEFGIKKTRIPVELG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 167 VGGCTWLEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTCGRHMSAHRVSGALARVLEGTLAGHTLTAELMAHP 246
Cdd:cd10806  161 LESCNWIEEARREFYKGVEEDALEAVKIFSSHGIRWTDYFIGLSTMGKNMTEQRLQSSLITFKKSKPASRSVTCELMVHP 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 182701408 247 GYPSVPPTGGCGEGPDAFSCSWERLHELRVLTAPTLRAQL 286
Cdd:cd10806  241 GYPSVNGCGGCGEGPDDFSQSPDREHELKVLTSPSLRNFL 280
ChbG COG3394
Chitooligosaccharide deacetylase ChbG, YdjC/CelG family [Carbohydrate transport and metabolism] ...
6-299 1.45e-66

Chitooligosaccharide deacetylase ChbG, YdjC/CelG family [Carbohydrate transport and metabolism];


Pssm-ID: 442621  Cd Length: 271  Bit Score: 209.78  E-value: 1.45e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   6 MRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARRgASSLLG 84
Cdd:COG3394    1 KKLIVNADDFGLSPGVNEAIIEAHREGILTSTSLMVNGPAFPEAAALARENpGLDVGLHLTLTSGRPLTPPEE-VPSLVD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  85 PEGFFLGKMG-FREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPL 163
Cdd:COG3394   80 EDGRFFPSLGrLGVRAFLGRADLDEVEAELRAQIERFLA-AGLPPTHLDSHQHVHLHPGVLEAVLDLAKEYGLPAVRLPR 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 164 ErgvggctwlEAPARAFACAVERDARAAVGPFSRHGLRWTDAFVGLSTcGRHMSAHRVSGALARVLEGtlaghtlTAELM 243
Cdd:COG3394  159 E---------PAPAILRRPGLAALARGARRRARRAGLPTNDGFFGLFY-SGKMTEERLLRLLDALPPG-------VTEIM 221
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 182701408 244 AHPGYPSvpptggcGEGPDAFSCSWERLHELRVLTAPTLRAQLAQDGVQLCALDDL 299
Cdd:COG3394  222 CHPGFVD-------PELRAISSYTYPREAELAALTSPEVKEALEERGIELITYRDL 270
YdjC_like cd10788
YdjC-family proteins; YdjC-family proteins are widely distributed, from human to bacteria. It ...
8-280 7.69e-56

YdjC-family proteins; YdjC-family proteins are widely distributed, from human to bacteria. It is represented by an uncharacterised protein YdjC (also known as ChbG), encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. This subfamily also includes hopanoid biosynthesis associated proteins HpnK and many uncharacterized YdjC homologs. Although the exact molecular function of the YdjC-family proteins remains unclear, it has been suggested that they play a role in the cleavage of cellobiosephosphate.


Pssm-ID: 212100 [Multi-domain]  Cd Length: 243  Bit Score: 181.45  E-value: 7.69e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   8 LVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARR-HSIPTGLHANLSEGRPVgPARRGASSLLGPE 86
Cdd:cd10788    1 LILNADDFGLTHAVNEGIIDAHRNGRLTSTSLMVNSPASAEAAALAKRnPRLDLGLHLNLTEGQPL-TPPAKSPSLLDEA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  87 GFFLGKMGFREAVaAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLERG 166
Cdd:cd10788   80 GRFKSSPIFRRSF-EGKLNAAEVRKEIEAQIDRFKE-LGRTPDHIDSHHHVHVLPVLLGVLLELLREGGILPVRIPGNLE 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 167 VGGCTWLeaparafacavERDARAAVGPFSRHGLRWTDAFVGLSTCGrhmsaHRVSGALARVLEgtlAGHTLTAELMAHP 246
Cdd:cd10788  158 FNGNNRY-----------DKDLLPELERFLKLKIFTHDYSLDLYVDG-----TIDQGPILRLPD---LVKEGVAELMVHP 218
                        250       260       270
                 ....*....|....*....|....*....|....
gi 182701408 247 GYPsvpptggcgEGPDAFSCSWERLHELRVLTAP 280
Cdd:cd10788  219 GLP---------DDIRALGSDLDREKELEALLSP 243
YdjC pfam04794
YdjC-like protein; Family of YdjC-like proteins. This region is possibly involved in the the ...
7-151 4.20e-49

YdjC-like protein; Family of YdjC-like proteins. This region is possibly involved in the the cleavage of cellobiose-phosphate.


Pssm-ID: 461430  Cd Length: 187  Bit Score: 162.37  E-value: 4.20e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408    7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIpTGLHANLSEGRPVGPaRRGASSLLGPE 86
Cdd:pfam04794   1 RLIINADDFGLSPGVNRAIIELLEAGILTSTSLMVNGPAAPEAAALAKAAPA-LGLHLTLTSGKPLLP-PEEVPSLVDED 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 182701408   87 GFFlgkmgFREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEAL 151
Cdd:pfam04794  79 GRF-----FGFRYLLRRLDLAEVEREIRAQIERFLD-LGLPPDHVDGHQHVHVLPGVREALLDLA 137
YdjC cd10808
Escherichia coli YdjC-like family of proteins; Uncharacterized subfamily of YdjC-like family ...
7-250 5.11e-48

Escherichia coli YdjC-like family of proteins; Uncharacterized subfamily of YdjC-like family of proteins. Included in this subfamily is the uncharacterized Escherichia coli protein YdjC (also known as ChbG), encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


Pssm-ID: 212119  Cd Length: 259  Bit Score: 161.66  E-value: 5.11e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARRGaSSLLGP 85
Cdd:cd10808    1 RLIVNADDFGLHPGVNRAILEAHRAGIVTSTTLMAGGPAFDDAVALARENpGLGVGVHLTLVGGLPVVPPAEI-PSLVDE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  86 EGFFLGK-MGFREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRFTRLPLE 164
Cdd:cd10808   80 DGVFLRSyLAFAKRLLTGRIRLSEVERELRAQIERVLD-AGIRPTHLDSHQHTHVLPGVLDIVLDLAARYGIPAVRIPDE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 165 -----RGVGGCTWLEAPARAFACAVERDARAAvgpfsRHGLRWTDAFVGLSTcGRHMSAHRVSGALARVLEGtlaghtlT 239
Cdd:cd10808  159 ppffaRLAKSGLRRRAGVGLSVLAARARARLR-----RLGLSTPDGFWGIVA-GGALDEATLRAILDRLPEG-------V 225
                        250
                 ....*....|.
gi 182701408 240 AELMAHPGYPS 250
Cdd:cd10808  226 TELMCHPGEDD 236
YdjC_EF3048_like cd10803
Enterococcus faecalis EF3048 and similar proteins; This subfamily is represented by a putative ...
7-283 2.97e-43

Enterococcus faecalis EF3048 and similar proteins; This subfamily is represented by a putative cellobiose-phosphate cleavage protein EF3048 from Enterococcus faecalis v583. It is similar to Escherichia coli YdjC, a hypothetical protein encoded by the celG gene. EF3048 might function as a homodimer. Each of the monomers consists of a (beta/alpha)-barrel fold that forms an active homodimer. The molecular function of the EF3048 is unclear.


Pssm-ID: 212114  Cd Length: 228  Bit Score: 148.47  E-value: 2.97e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGParrGASSLLGP 85
Cdd:cd10803    1 KLIVNADDFGLTKGVNYGIIEAHRNGVVTSTTLMVNMPGFEHAVELAKENpGLGVGVHLTLTCGKPLLD---DVPSLVDE 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  86 EGFFLGKmgfREAVAAGDVDLPQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGvrftrLPLer 165
Cdd:cd10803   78 DGNFRKQ---SDYEGEGEIDPEEVYREWKAQIEKFLA-LGLKPTHLDSHHHVHTHPQVLPVVERLAKEYG-----LPV-- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 166 gvggctwleaparafacaverdaRAAVGPFSRHGLRWTDAFVGlstcgrHMSAHRVSGALARVLEGTLAGHTLTAELMAH 245
Cdd:cd10803  147 -----------------------RAGDTAILYLGVKTTDRFSD------DFYGEGVSLENLLEILDEAAAGYEVVEIMCH 197
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 182701408 246 PGYpsvpptggcgegPDAF-----SCSWERLHELRVLTAPTLR 283
Cdd:cd10803  198 PAY------------VDQElleisSYNLPRLKELEILTSPELK 228
PRK02134 PRK02134
chitin disaccharide deacetylase;
6-299 5.88e-42

chitin disaccharide deacetylase;


Pssm-ID: 235007  Cd Length: 249  Bit Score: 145.86  E-value: 5.88e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   6 MRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARrgasSLLG 84
Cdd:PRK02134   3 RLLIVNADDFGLSKGQNYGIIEAHRNGVVTSTTAMVNMPAIDHAVQLSREYpSLGVGMHFVLTAGKPLTAMP----SLTD 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  85 PEGFFlGKMgFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVrftrlPLe 164
Cdd:PRK02134  79 RDGLL-GKW-IWQLAEEGTLPLEEIAQELAAQYERFLSLFGRKPTHLDSHHHVHMLPQIFPIVARFAAEYGV-----PL- 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 165 RGVGGCTWLEAPARafacaverdaraavgpFSRHglrWTDAFVGlstcgrhmsaHRVSGAL-ARVLEGTLAGHTLTAELM 243
Cdd:PRK02134 151 RIDSNAGDLPANLR----------------SSDG---FSSDFYG----------EEVSEDLfLQLLDRSKHRGEQSLEVM 201
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 182701408 244 AHPGY--PSVPPTGGCgegpdafscsWERLHELRVLTAPTLRAQLAQDGVQLCALDDL 299
Cdd:PRK02134 202 CHPAFidNTLRQSAYC----------YPRLTELEVLTSASLKEAIAERGYRLGSYLDL 249
YdjC_HpnK_like cd10804
hopanoid biosynthesis associated protein HpnK and similar proteins; The subfamily includes ...
7-280 9.98e-35

hopanoid biosynthesis associated protein HpnK and similar proteins; The subfamily includes some uncharacterized proteins annotated as hopanoid biosynthesis associated proteins, HpnK. They show high sequence similarity to proteins from the YdjC-family, the latter is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source.


Pssm-ID: 212115  Cd Length: 261  Bit Score: 126.98  E-value: 9.98e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANLSEGRPVGPARRgASSLLGP 85
Cdd:cd10804    1 RLIVTADDFGLSHEVNEAVEQAHREGILTSASLMVGGPAADDAVARARRLpGLGVGLHLVLVEGRSVLPPEE-IPDLVDA 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  86 EGFF---LGKMGFR----EAVAAgdvdlpQVREELEAQLSCFRElLGRAPTHADGHQHVHVLPGVCQVFAEALQAYGVRF 158
Cdd:cd10804   80 QGRFpsdPVRAGFRyffsPAARR------QLRAEIRAQFEAFRA-TGLPLDHVDGHKHFHLHPTVFDLLLELAPEYGIRA 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 159 TRLPLERG-----VGGCTWLEA-PARAFACAverdARAAVGPFSRHGLRWTDAFVGLSTCGrHMSAHRVSGALARVLEGt 232
Cdd:cd10804  153 VRLPREPLrlnlaADRQWLGRGlGALIFRPL----ARRLRRRLRRAGLRVNDRVFGLLWSG-AMTEDYLLALLEHLPEG- 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 182701408 233 laghtlTAELMAHPGypSVPPTGGCGEGPDAFSCSwerlhELRVLTAP 280
Cdd:cd10804  227 ------LTEIYFHPA--VAPDAELRGRMPGYRHAE-----ELAALLSP 261
YdjC_like_3 cd10807
uncharacterized YdjC-like family proteins from bacteria; This subfamily contains many ...
8-280 2.24e-31

uncharacterized YdjC-like family proteins from bacteria; This subfamily contains many hypothetical proteins, and belongs to the YdjC-like family of uncharacterized proteins from bacteria. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


Pssm-ID: 212118  Cd Length: 251  Bit Score: 118.10  E-value: 2.24e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   8 LVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHS--IPTGLHANLSEGRPvgparrgassLLGP 85
Cdd:cd10807    1 IILCADDFGLSPGVSAAILDLAEAGRLSATSCMVNGPAWPEAAAALRPLRgrADIGLHLNLTEGFP----------LLAP 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  86 EGFFLGkmgFREAVAA---GDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVLPGVCQVFAEALQAYG------V 156
Cdd:cd10807   71 GGLLPP---LGRLLLRsllGRLDRAAIRAEIEAQLDAFEEAFGRAPDFVDGHQHVHQLPVIRDALLDLLARRYpggrpwL 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 157 RFTRLPLERGVGGCTWLEAPARAFACAvERDARAAvgpfsRHGLRWTDAFVGLSTCGRHMS-AHRVSGALARVLEGTLag 235
Cdd:cd10807  148 RSTAEPLPAGLPLAGLLKALVLAALGA-GALRRLA-----RAGIPTNRGFAGVYDFGPQADyAALLRRWLAAAGDGPL-- 219
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 182701408 236 htltaeLMAHPGYPSvpptggcGEGPDAFSCSWERLHELRVLTAP 280
Cdd:cd10807  220 ------IMCHPGLPD-------EELSAADPIAPAREREYAYLASD 251
YdjC_like_1 cd10805
uncharacterized YdjC-like family proteins from bacteria; The subfamily contains many ...
7-166 5.31e-28

uncharacterized YdjC-like family proteins from bacteria; The subfamily contains many hypothetical proteins, and belongs to the YdjC-like family of uncharacterized proteins from bacteria. The YdjC-family is represented by an uncharacterised protein YdjC (also known as ChbG) encoded by the chb (N,N'-diacetylchitobiose, also called [GlcNAc]2) or cel operon in Escherichia coli, which encodes enzymes involved in growth on an N,N'-diacetylchitobiose carbon source. The molecular function of this subfamily is unclear.


Pssm-ID: 212116  Cd Length: 251  Bit Score: 108.83  E-value: 5.31e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHS-IPTGLHANLSEGRPVGPARRgASSLLGP 85
Cdd:cd10805    1 KLLVRADDLGYSEGVNYGILKAVRNGIVRSTGLMVNMPAAEHALELIKDYPdVCLGLHTNIVLGKPLSDPEL-IPSLVDE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  86 EGFFLGKMGFREAVAAGD--VDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHvlPGVCQVFAEALQAYGVRFTRLPL 163
Cdd:cd10805   80 NGEFKSSKEYRAELAEGEdfVNYEEVYLEIEAQVERFIELVGRKPDYIEGHAVET--PNFEKAIEDVAEKYGIPYNGDYL 157

                 ...
gi 182701408 164 ERG 166
Cdd:cd10805  158 PKD 160
YdjC_TTHB029_like cd10802
Thermus thermophiles TTHB029 and similar proteins; This subfamily is represented by an ...
7-282 6.94e-23

Thermus thermophiles TTHB029 and similar proteins; This subfamily is represented by an YdjC-family protein TTHB029 from Thermus thermophilus HB8; it is similar to Escherichia coli YdjC, a hypothetical protein encoded by the celG gene. TTHB029 functions as a homodimer. Each of monomer consists of (beta/alpha)-barrel fold. The molecular function of TTHB029 is unclear.


Pssm-ID: 212113  Cd Length: 251  Bit Score: 95.06  E-value: 6.94e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408   7 RLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRH-SIPTGLHANL-SE-----GRPVGPaRRGA 79
Cdd:cd10802    2 LLIIHADDFGMSHSANEAIIELLEEGIVSSASVMVPCPWFPEAAAYAAANpEIDVGLHLTLtSEwdnyrWGPLTP-KEQV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408  80 SSLLGPEGFFLGKmgfREAVAAgDVDLPQVREELEAQLSCFRElLGRAPTHADGHQ-HVHVLPGVCQVFAEALQAYGVRF 158
Cdd:cd10802   81 PSLVDEEGYFPPD---VAELEA-NADPDEVEKELRAQIERALK-AGIRPTHLDSHMgSLYGGPEFLELYLRLAAEYGLPV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 182701408 159 tRLPLergvggcTWLEAPARAFACAVERDARAAvgpfsrhGLRWTDAFVGLSTCGRHMSahrVSGALARVLEGTLAGHTl 238
Cdd:cd10802  156 -RLPR-------LLAALGRQAALADVGELAYAF-------GVPVLDDLIGGPFPVTYEE---KRASYIQALRKLPPGLT- 216
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 182701408 239 taELMAHPGYPSvpptggcGEGPDAFSCSWERLHELRVLTAPTL 282
Cdd:cd10802  217 --ELIIHPALDT-------EELKAIEDSAQKRQWDYDLFTDPEL 251
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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