|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-743 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1355.33 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 1 MEHTYQYSWIIPFIPLPVPILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNE 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 81 FSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 161 LIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNFFFFTLCGFLLFVGPIAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLI 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 401 GTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSRSFYSLSLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 481 KEEEKKLNKNFglvPLLTMNNTKRSSFFCNKTYKISNNVRNKIFITVENFGlNTRTFYYPHESDNTILFPILILLLFTLF 560
Cdd:CHL00025 481 KEESKKINKLL---LLLTMNNNERVSFFSKKTYKIDGNVRNMIRSFITIFG-NKKTFSYPHESDNTMLFPLLVLVLFTLF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 561 IGAIGIPFNQEGIDFDILSKLFTPSINLLHNNSQNFVDWYEFLRNATFSVSIAFFGIFIAYCLYKPFYSSLLNLTLLNSF 640
Cdd:CHL00025 557 VGFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINSF 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 641 QKWNSKRIRWEKLINFVYNWSYNRGYIDAFFKTYLIESIRGLAKQTNFVDKRIIDGITNGVGITSFFVGEVTKYIGGSRI 720
Cdd:CHL00025 637 VKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGRI 716
|
730 740
....*....|....*....|...
gi 221272275 721 SSYLFFYLSYVLIFLLILFFFYF 743
Cdd:CHL00025 717 SSYLFLYLFYVSIFLLILYFFFS 739
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-723 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 654.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 1 MEHTYQYSWIIPFIPLPVPILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNE 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 81 FSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 161 LIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNFFFFTLCGFLLFVGPIAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLI 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 401 GTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGhlntyflNYSGKKSRSFYSLSLWG 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRGNDKELQKELLAAA 473
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 481 KEEEKKLNKNFGLVPLLTMNNTkrssffcnktykisnnvrnkifitvenfglntrtfyyPHESDNTILFPILILLLFTLF 560
Cdd:PRK07376 474 DAPGHHEGHHEEHGEHHHHSGS-------------------------------------PHESPWTMTLPLVVLAVPSVL 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 561 IGAIGIPFNQEGIDFdilskLFTPSINLLHnnSQNFvDWYEFLRNATFSVSIAFFGIFIAYCLYkpfyssllnltllnSF 640
Cdd:PRK07376 517 IGLLGTPWNNRFEAF-----LHAPGEALEA--AAHF-EWGEFLILAGASVGIALIGITLASLMY--------------LL 574
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 641 QKWNSKRIrwEKLINFVYNWSYNRGYIDAFFKTYLIESIRGLAKQTNFVDKRIIDGITNGVGITSFFVGEVTKYIGGSRI 720
Cdd:PRK07376 575 KKIDPAAI--AERFPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGRA 652
|
...
gi 221272275 721 SSY 723
Cdd:PRK07376 653 QFY 655
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-725 |
4.32e-179 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 525.49 E-value: 4.32e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 5 YQYSWIIPFIPLpvpillgVGLLLFPTATKNLRRIWTF-LSIFLLSIVMIFSLYLsIQQIFISCIHQNVWSWTINNEFSF 83
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSLLL-FPAVLGGEVVVELYTWIPVGSLGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 84 EFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIG 163
Cdd:COG1009 73 DFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 164 FWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLIlnnrvNFFFFTLCGFLLFVGPIAKSAQ 243
Cdd:COG1009 153 FWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQ 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 323
Cdd:COG1009 228 FPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYST 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 324 MSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILMGGLTKHVPITKTAFLIGTL 403
Cdd:COG1009 308 VSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGAL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 404 SLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFeghlntyflnysgkksrsfyslslWG 480
Cdd:COG1009 379 SLAGIPPFAGFFSKEAILEaalEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------FG 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 481 KEEEKKLNKnfglvplltmnntkrssffcnktykisnnvrnkifitvenfglntrtfyyPHESDntilfPILILLLFTLF 560
Cdd:COG1009 435 KPRPKTPKH--------------------------------------------------PHESP-----WLMTLPLVVLA 459
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 561 IGAIGIPFNQEGIDFDILSK--LFTPSINLLHNNSQNFVdwyeflrnatfSVSIAFFGIFIAYCLYkpfyssllnltlln 638
Cdd:COG1009 460 VLSLVLGLLLPGLLEGLLAPaaVLGGELHLAHGLLLNAL-----------PLLLSLLGIALGYLLY-------------- 514
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 639 sfqkWNSKRIRWEKLINFVYNWSYNRGYIDAFFKTYLIESIRGLAKqTNFVDKRIIDGITNGVGITSFFVGEVTKYIGGS 718
Cdd:COG1009 515 ----LKRPLPALAERLKPLYRLLANKWYFDELYDALFVKPVRALAR-FLWFDRYVIDGIVNGLARLTLFSGRLLRRLQTG 589
|
....*..
gi 221272275 719 RISSYLF 725
Cdd:COG1009 590 YLQFYAL 596
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-456 |
2.07e-173 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 511.24 E-value: 2.07e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 7 YSWIIPFIPLPVPILLGVGLllfptatknlRRIW-----------TFLSiFLLSIVMIFSLYLSIQQIFisciHQNVWSW 75
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFG----------RRIGekwahlvgtglVGLS-ALLSLVVFFDFLLGGGRAF----SQTLWTW 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 76 TINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVG 155
Cdd:PRK06590 69 ISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 156 MCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQdlfEIFNNLILNNRVNFFFFTLCGFLLFV 235
Cdd:PRK06590 149 LCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYD---EVFAAAPQFFGLGWSALTLICLLLFI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 236 GPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDI 315
Cdd:PRK06590 226 GAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 316 KRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITK 395
Cdd:PRK06590 306 KRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTY 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221272275 396 TAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFA-IIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK06590 378 ATFLIGTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHG 439
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
9-456 |
3.99e-149 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 448.27 E-value: 3.99e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 9 WIIPFIPLPVPILLGVGLLlfpTATKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNEFSFEFGYF 88
Cdd:TIGR01974 4 FLIVFLPLIGFLIAGLFGR---RIGERVSGIIGIGSVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTR 168
Cdd:TIGR01974 81 LDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 169 PVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNlilnnrVNFFFFTLCGFLLFVGPIAKSAQFPLHV 248
Cdd:TIGR01974 161 PSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:TIGR01974 235 WLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 329 YMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGI 408
Cdd:TIGR01974 315 YMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGF 386
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 221272275 409 PPLACFWSKDEILNDSL--LFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:TIGR01974 387 PGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHG 436
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-690 |
1.63e-107 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 327.65 E-value: 1.63e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 448 RIYLLTFEGHLNTYFLNYSGKKSRSFYSLSLWGKEEEKKLNKNFGLVPLLTMNNTKRSSFFCNKTYKISNNVRNKI--FI 525
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTrpFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 526 TVENFGlNTRTFYYPHESDNTILFPILILLLFTLFIGAIGIPFNQEGIDFDILSKLFTPSINLLHNNSQNFVDWYEFLRN 605
Cdd:pfam01010 81 TITHFD-NKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFVTN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 606 ATFSVSIAFFGIFIAYCLYKPFYSSLLNLTLLNSFQKWNSKRIRWEKLINFVYNWSYNRGYIDAFFKTYLIESIRGLAKQ 685
Cdd:pfam01010 160 AIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAEL 239
|
....*
gi 221272275 686 TNFVD 690
Cdd:pfam01010 240 THFFD 244
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
42-454 |
1.29e-102 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 327.80 E-value: 1.29e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 42 FLSIFLLSIVMIFSLYLSIQQIF-ISCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFLIFYEILFnSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 121 YLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWIT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 201 GSFEFQDLFeifnNLILNNrvNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00020 190 GSLDFSSVF----NMVVSA--PSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 281 LPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 361 GSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL-FSPIFAI-IACST 438
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 221272275 439 AGLTAFYMFRIYLLTF 454
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
38-460 |
7.06e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 325.81 E-value: 7.06e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 38 RIWTFLSIFLLSIVMIFSLYLSIqqIFISCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSH 117
Cdd:MTH00210 29 GILTSSCIVISAIVSCCIFYETT--LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSG 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 118 DQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLY 197
Cdd:MTH00210 107 DPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMIL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 198 WITGSFEFQDLFEIFNNLILNNRVnffffTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:MTH00210 187 KEFGTLEFSTISSLLVTNINKESL-----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLI 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 278 ARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLF 357
Cdd:MTH00210 262 IRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLF 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 358 LGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILndSLLFSPIFAIIA-- 435
Cdd:MTH00210 342 LSAGSVIHAV--------SDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLIL--ELTYDKYYIAFAyw 411
|
410 420
....*....|....*....|....*..
gi 221272275 436 --CSTAGLTAFYMFRIYLLTFEGHLNT 460
Cdd:MTH00210 412 lgSFSALLTAFYSIRLIYLTFITNTNS 438
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-457 |
2.55e-85 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 281.45 E-value: 2.55e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 20 ILLGVGLLLFPTATK-NLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQnvWSWTINNEFSFEFGYFIDPLTSIMSI 98
Cdd:MTH00211 9 FLLILILLLLPLLLPlNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 99 LITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKA 178
Cdd:MTH00211 87 VALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 179 FVTNRVGDFGLLLGILGLYWITGSFEFQDLFeifnnlILNNRVNFFFFtlcgfLLFVGPIAKSAQFPLHVWLPDAMEGPT 258
Cdd:MTH00211 167 VIYNRIGDIGLLLSMVWLLLNLNSWEISQLF------ILNLDLTLFLL-----GLLLAAMGKSAQFGFHPWLPSAMEGPT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 259 PISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS 338
Cdd:MTH00211 236 PVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 339 YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKD 418
Cdd:MTH00211 316 PQLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKD 387
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 221272275 419 EIL---NDSLL--FSPIFAIIAcstAGLTAFYMFRIYLLTFEGH 457
Cdd:MTH00211 388 LILesmNGSYLnaWALLLTLLA---TSLTAAYSFRLIFLSLGGY 428
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
68-421 |
4.84e-82 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 274.91 E-value: 4.84e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 68 IHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQV 147
Cdd:MTH00032 57 VHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 148 YFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDL------FEIFNNLILNNRV 221
Cdd:MTH00032 137 FIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 222 NFFF---FTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIG 298
Cdd:MTH00032 217 YESPlapFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 299 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdK 377
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------D 369
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 221272275 378 SQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 370 EQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
2.79e-80 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 258.40 E-value: 2.79e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 141 SSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNR 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 221 VNFffftlCGFLLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIG 298
Cdd:pfam00361 81 LLL-----LFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 299 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221272275 376 dKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
42-454 |
8.57e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 256.82 E-value: 8.57e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 42 FLSIFLLSIVMIFSLYLSIQQIFISC--IHQNVWSWTINNEFSFEFGYFIDpltsIMSILITTVGILV----LIYSDNYM 115
Cdd:MTH00208 56 NFSISLLKTLAFLSLINLLIWILLGCpnINISLSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYM 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 116 SHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILG 195
Cdd:MTH00208 132 SNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 196 LYWITGSFefqDLFEIFnnliLNNRVNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 275
Cdd:MTH00208 212 SLINFNSW---NLNEIL----SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVF 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 276 LVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKAL 355
Cdd:MTH00208 285 LLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAM 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 356 LFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPI 430
Cdd:MTH00208 365 LFLCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSII 436
|
410 420
....*....|....*....|....
gi 221272275 431 FAIIACStagLTAFYMFRIYLLTF 454
Cdd:MTH00208 437 LALIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
2.42e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 254.83 E-value: 2.42e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 20 ILLGVGLLLFP--TATKNLRRIWTFLSI---FLLSIV--MIFsLYLSIQQIFIScihqnvWSW-TINN---EFSFEFGYF 88
Cdd:MTH00066 11 MILSLLLLILPllLPKSNNFHTNVKTSVktaFFISLIplMIF-INQGLESITTS------FHWmNIFNfniNSSFKFDQY 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 idpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 164
Cdd:MTH00066 84 --------SIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGW 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 165 WFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvnffffTLCGFLLfvGPIAKSAQF 244
Cdd:MTH00066 156 WHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTL---------PLLGLIL--AAAGKSAQF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTM 324
Cdd:MTH00066 225 GLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 325 SQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLS 404
Cdd:MTH00066 305 SQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLA 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 221272275 405 LCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00066 377 LTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
1.38e-74 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 248.14 E-value: 1.38e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 11 IPFIPLPVPILLGVGLLLFPTATKnLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCihqNVWSWtinnEFSFEFGYFID 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALALLLQVLAGGPLVY---ALGGW----PAPFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 91 PLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPv 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 171 AANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnrvNFFFFTLCGFLLFVGPIAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEL------DPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 327 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 221272275 404 SLCGIPPLACFWSKDEILnDSLLFS--PIFAIIACSTAGLTAFYMFRIY 450
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLL-QAALEAgaWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-457 |
3.18e-74 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 252.01 E-value: 3.18e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGvgLLLFPTATKNLRriWTFLSI-------FLLSIV-MIFSLYLSIQQIFIScihqnvWSWTINNEF 81
Cdd:MTH00004 5 LNTTTLLTLLILLT--PILLPLLSKNLK--NSPTTIkttvklaFLISLIpLTLFLNSGTESITTN------WPWIFTTTF 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 82 SFEFGYFIDPLtsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMC 157
Cdd:MTH00004 75 NIPISFKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 158 SYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvnffffTLCGFLLfvGP 237
Cdd:MTH00004 151 SFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQTPTL---------PLLGLIL--AA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 238 IAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKR 317
Cdd:MTH00004 220 TGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKK 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 318 GLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTA 397
Cdd:MTH00004 300 IIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSC 371
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221272275 398 FLIGTLSLCGIPPLACFWSKD---EILNDSLLFSPIFAIIACSTAgLTAFYMFRIYLLTFEGH 457
Cdd:MTH00004 372 LTIGNLALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-456 |
2.02e-73 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 250.21 E-value: 2.02e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 6 QYSWIIPFIPLpvpilLGvGLLLFPTATKNLRRiwT------FLSIFLLSIVMIFSLyLSIQQIFISCIHQNVWSWTINN 79
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRR--TgprpaaYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 80 EFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSY 159
Cdd:PRK07390 78 DLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 160 LLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNffffTLCGFLLFVGPIA 239
Cdd:PRK07390 158 LLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPLTA----TLLGLALIAGPTG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 240 KSAQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGL 319
Cdd:PRK07390 234 KCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRAL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 320 AYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFL 399
Cdd:PRK07390 313 SYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFL 383
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 221272275 400 IGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07390 384 VGSAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG 440
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
85-452 |
1.55e-71 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 248.30 E-value: 1.55e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 85 FGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 164
Cdd:PRK12647 58 LSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 165 WFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEiFNNLILNNRvnffFFTLCGFLLFVGPIAKSAQF 244
Cdd:PRK12647 138 NHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREHP----LYLAILLLVLGGAFTKSAQF 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTM 324
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 325 SQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLIG 401
Cdd:PRK12647 293 SALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG-----TRDITKLGGLRRAMPITAAAALLA 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 221272275 402 TLSLCGIPPLACFWSKDEILnDSLLFSPIFAIIACSTAGLTAFYMFRIYLL 452
Cdd:PRK12647 364 ALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFL 413
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
28-457 |
1.27e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 239.75 E-value: 1.27e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 28 LFPTATKNlrriwTFLSIFLLSIVMIFSLYLSIQQIFIScihqNvWSW----TINNEFSFEFGYFidpltsimSILITTV 103
Cdd:MTH00108 31 NYPLYVKT-----TISYAFIISLIPTMMFIHSGQEMIIS----N-WHWmtiqTLKLSLSFKLDYF--------SMIFIPV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 104 GILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAF 179
Cdd:MTH00108 93 ALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAI 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 180 VTNRVGDFGLLLGILGLYWITGSFEFQDLFeifnnlILNNrvNFFFFTLCGFLLfvGPIAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00108 173 LYNRIGDIGFILAMAWFLLNLNSWDLQQIF------MLNP--NNSNLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTP 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 260 ISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00108 243 VSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 340 RSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKD- 418
Cdd:MTH00108 323 HLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDl 394
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 221272275 419 --EILNDS------LLFSpifaIIACStagLTAFYMFRIYLLTFEGH 457
Cdd:MTH00108 395 iiEAANTSytnawaLLIT----LIATS---LTAAYSTRIIFFALLGQ 434
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
4.94e-69 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 238.19 E-value: 4.94e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 73 WSW----TINNEFSFEFGYFidpltsimSILITTVGILV----LIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNL 144
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 145 IQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILglyWI---TGSFEFQDLFEIFNNLILnnrv 221
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMA---WMatnLNSWEIQQIFALSKDFDL---- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 222 nffffTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIIT 301
Cdd:MTH00137 215 -----TLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALT 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 302 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNM 381
Cdd:MTH00137 290 TLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDI 361
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221272275 382 ILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLL--FSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00137 362 RKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
27-456 |
4.73e-68 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 239.36 E-value: 4.73e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 27 LLFPTATKNLRRIwtFLSIFLLSI-VMIFSLYLSIQQIFIScihQNVWSWTIN--NEFSFEFGYFIDPLTSIMSILITTV 103
Cdd:TIGR00940 13 SLIPILYPSDQRI--HIGWFVLAIpLVCFLYTLGLYPYTAS---GGVLHYTIDwvPELGLNFTLYMDGLALLFSLLITGI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 104 GILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNR 183
Cdd:TIGR00940 88 GVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 184 VGDFGLLLGILGLYWITGSFEFQDLFEiFNNLILNNrvNFFFFTLcgFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISAL 263
Cdd:TIGR00940 168 FGGLAMLGGLILLGKITGSFSIDAVIA-SADAIRNS--PLFGTAM--VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAY 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 264 IHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS----- 338
Cdd:TIGR00940 243 LHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhy 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 339 -----------YRSALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCG 407
Cdd:TIGR00940 323 qgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKLGGLFHIMPITFTLAMIASAAMAG 393
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 408 IPPLACFWSKDEILN-----------DSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:TIGR00940 394 VPPFNGFLSKEMFFAeaitahlvnpfDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
27-457 |
7.45e-68 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 239.06 E-value: 7.45e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 27 LLFPTATKNLRRIWTFLSIFLLSIVmIFSLYLSiqqiFISCI-HQNVWSWTINNEFSFE--FGYFIDPLTSIMSILITTV 103
Cdd:PRK12645 16 LLIPFLYKYFKRIHTGWFVLPVPVV-LFIYFLS----LIPTTmSGNTVMKTLPWIPSLGinFTLYVDGLSLLFALLITGI 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 104 GILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTN 182
Cdd:PRK12645 91 GSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLIT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 183 RVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnrVNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISA 262
Cdd:PRK12645 171 VFGGLSMLGGFILLYIMTGSFSIREMIANADEI-----QNSPLFIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSA 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 263 LIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---- 338
Cdd:PRK12645 246 YLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAaslh 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 339 ------------YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLC 406
Cdd:PRK12645 326 yqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRKLGGLMTIMPITFTIALIGALSMA 396
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221272275 407 GIPPLACFWSKDEILNDSL------LFS--------PIFAIIAcstAGLTAFYMFRIYLLTFEGH 457
Cdd:PRK12645 397 GLPPFNGFLSKEMFFESMLnateanLFSldtwgvlfPVIAWVA---SVFTFVYSIIFIFKTFFGK 458
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
18-434 |
1.17e-66 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 228.32 E-value: 1.17e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 18 VPILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIFSLYLSiqqifiSCIHQNVWSWTINNEFSFefGYFIDPLTSIMS 97
Cdd:PRK06525 10 LPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQA------GKVAVTLTLVNLGDVALF--GLVIDPVSVLIG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 98 ILITTVGILVLIYSDNYMS-------HDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTrPV 170
Cdd:PRK06525 82 FVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 171 AANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILnnrvnffffTLCGFLLFVGpIAKSAQFPLHVWL 250
Cdd:PRK06525 161 ALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKY---------LVFLGILFAA-WGKSAQLPFYSWL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIP-SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK06525 231 PDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPhVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 330 MMLALGMGSYRS------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTL 403
Cdd:PRK06525 311 MFFGLSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
410 420 430
....*....|....*....|....*....|.
gi 221272275 404 SLCGIPPLACFWSKDEILNDSLLFSPIFAII 434
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
27-435 |
2.42e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 231.23 E-value: 2.42e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 27 LLFPTATKNLRRIWTFLsIFLLSIVMIFSLYlsiQQIFISCIHQNVWSW--TINNEFSFefgyFIDPLTSIMSILITTVG 104
Cdd:PRK12648 18 ALLPRNARNAEAWLAGL-VALAALVLLALLY---PAVAAGEVIRAEIEWlpALGLNLSL----RLDGLAWLFALLILGIG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 105 ILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRV 184
Cdd:PRK12648 90 LLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGA 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 185 GDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRVN-----FFFFTLCGFLLfvGPIAKSAQFPLHVWLPDAMEGPTP 259
Cdd:PRK12648 170 GGLALLAGVLLLGHIVGSYDLDV--------VLAAGDLirahpLYPPALVLILL--GAFTKSAQFPFHFWLPHAMAAPTP 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 260 ISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:PRK12648 240 VSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 340 RS---ALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWS 416
Cdd:PRK12648 320 LAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLS 390
|
410 420
....*....|....*....|....*...
gi 221272275 417 K----DEILNDSLLFS-----PIFAIIA 435
Cdd:PRK12648 391 KemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
84-452 |
1.30e-63 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 227.02 E-value: 1.30e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 84 EFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIG 163
Cdd:PRK12649 73 EFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 164 FWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEifNNLILNNRVNFFFFTLCGFLLFVGPIAKSAQ 243
Cdd:PRK12649 153 YWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQ--DSELIENIKGHPLFLITLILIFIGAAAKSAQ 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 323
Cdd:PRK12649 231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 324 MSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKT 396
Cdd:PRK12649 311 ISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITFI 381
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221272275 397 AFLIGTLSLCGIPPLACFWSKDEILNDSL----LFSPIFAII--ACSTAGLTAFYMFRIYLL 452
Cdd:PRK12649 382 VASIAALAMAGIPPLNGFLSKEMFYETSVemgaLIGGPFTIIipAVAVLGGVFTFAYSIKLI 443
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
72-448 |
1.88e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 222.88 E-value: 1.88e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 72 VWSWTinNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFF 150
Cdd:PRK12644 57 VVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYVF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 151 WELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRVNFFFFTLCG 230
Cdd:PRK12644 135 WELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSE--------LLADPPTGPAVSVAV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 231 FLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLAL 310
Cdd:PRK12644 207 VLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRAL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 311 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMILMGGL 387
Cdd:PRK12644 287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSGL 357
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 221272275 388 TKHVPITKTAFLIGTLSLCGIPPLACFWSK----DEILNDSLLFSPIFAIIACSTAG--LTAFYMFR 448
Cdd:PRK12644 358 GRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
89-460 |
8.56e-60 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 216.16 E-value: 8.56e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYL-RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12646 76 LDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYN 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 168 RPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnNRVNFFFFTLcgFLLFVGPIAKSAQFPLH 247
Cdd:PRK12646 156 NGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI---KNHGLFIPMI--FMFLLGAFTKSAQFPFH 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:PRK12646 231 IWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 328 GYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKH 390
Cdd:PRK12646 311 GMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIRILSGMRQL 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 391 VPITKTAFLIGTLSLCGIPPLACFWSKD----------EILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNT 460
Cdd:PRK12646 382 FPKMNLVMTIAALSMAGVPFLNGFLSKEmfldaltqtgQLSQFSLISMIIIVFIGVIASIFTFTYALYMVKEVFWGKYDS 461
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
9.11e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 203.54 E-value: 9.11e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 44 SIFLLSivmiFSLYLSIQQIFISCIHQNVW-SWTINN----EFSFEFgyFIDPLTSIMSILITTVGILVLIYSDNYMSHD 118
Cdd:MTH00151 8 SFLLFS----YSVFLFPLLGYFGLNGISLIfEWELLSvsscSFSFEL--VLDWVSLSFSGVVCLISGCVFLFSSSYMSED 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 119 QGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFvTNRVGD-FGLLLGILGLY 197
Cdd:MTH00151 82 PFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDvLILLSIALLVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 198 WitGSFEFQDLFEifnnlilnnrvnFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:MTH00151 161 L--GHWSILSMWD------------FKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLL 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 278 ARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLF 357
Cdd:MTH00151 227 IRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLF 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 358 LGSGSIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILnDSLLFSPI----FAI 433
Cdd:MTH00151 307 LCAGSIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL-ESSLMSPTsllmVLL 377
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 221272275 434 IACSTaGLTAFYMFRIYLLTFEGHLNTYFlnYSGKKSRSFY 474
Cdd:MTH00151 378 MFVGV-GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
42-470 |
1.73e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 202.68 E-value: 1.73e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 42 FLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGY 121
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 122 LRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYwITG 201
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 202 SFEFqdlfeIFNNLILNNrvnFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
Cdd:MTH00165 163 SWNF-----IFYLDFMKN---SFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 282 PLFIvIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 361
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 362 SIIHSMeaivgyspDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIAC 436
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILemvsmSNLNFFIFFLFFFST 385
|
410 420 430
....*....|....*....|....*....|....
gi 221272275 437 staGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKS 470
Cdd:MTH00165 386 ---GLTVSYSFRLIYYSMSGDFNLKSLNNLSDES 416
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-471 |
2.58e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 199.49 E-value: 2.58e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 45 IFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 125 FAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILglyWITgsfe 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIA---WML---- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 205 fqdLFEIFNNLILNNRVNFFFFTLcgFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 284
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVIS--VLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 285 IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 365 HSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAIIACSTAGLT 442
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLEsnMPIMTLILMFLSTSLT 384
|
410 420
....*....|....*....|....*....
gi 221272275 443 AFYMFRIYLLTFEGHLNTYFLNYSGKKSR 471
Cdd:MTH00209 385 AAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
39-451 |
6.45e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 192.67 E-value: 6.45e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 39 IWTFLSIFLLSIVMIFSLYLSI--QQIFIScihqnvwsWTINNEFS--FEFGYFIDPLTSIMSILITTVGILVLIYSDNY 114
Cdd:MTH00207 9 IASYLLWFMSILMFPLSLYLMMcnKTILIE--------WEIFTISSspINFTIILDPTGTLFSSTVLFISANVLLFAKTY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 115 MSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIgFWFTRPVAANACQKAFVTNRVGDFGLLL--- 191
Cdd:MTH00207 81 MQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLsig 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 192 -GILGLYWITGSFEFQDlfeiFNNLIlnnrvnffffTLCgflLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
Cdd:MTH00207 160 wTLNQGHWSITNMWQTD----MNNYI----------ALS---IMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLV 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 271 AAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHA 350
Cdd:MTH00207 223 TAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHA 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 351 YSKALLFLGSGSIIHSMEaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLF--- 427
Cdd:MTH00207 303 LFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYphn 374
|
410 420
....*....|....*....|....
gi 221272275 428 SPIFAIIACSTaGLTAFYMFRIYL 451
Cdd:MTH00207 375 SLMILMIFLAT-ALTAAYSTRFTL 397
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-447 |
6.00e-51 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 192.18 E-value: 6.00e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 16 LPVPILLGVGLLLFPTATKNLRRI--WTFLSIFLLSIVMIFslylsiqQIFISCIHQNVWSWTI-------NNEFSFEFG 86
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLL-------KELPPILDGDALTWSVtwipdllGNGVDVNLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 87 YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFwf 166
Cdd:PRK12650 75 LRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR-- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 167 TRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRV---NFFFFTLCGFLLFVGPIAKSAQ 243
Cdd:PRK12650 153 SGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSG--------ILHSDVwaeKPGLTTVVAVLIAVAAFTKSAQ 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 323
Cdd:PRK12650 225 FPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 324 MSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMILMGGLTKHVPITKTAFLI 400
Cdd:PRK12650 305 VSQLGWIVATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTI 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 221272275 401 GTLSLCGIPPLACFWSKDEILnDSLLFSPIFA---IIACSTAGLTAFYMF 447
Cdd:PRK12650 376 AALSMAAVPPLFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-456 |
6.20e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 185.95 E-value: 6.20e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGvgllLFPTATKNLRRIWTFLSIfLLSIVMIFSLYLSIQQIFIScihqnvwswtiNNEFSFEFG--- 86
Cdd:PRK12667 8 LTPILLVLFAFLLP----LLSILLKGNRKIQKIYAL-LVSLITLILSILLFIQVYSS-----------NKPIVYLFGgwp 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 87 ------YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYL 160
Cdd:PRK12667 72 apigivYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 161 LIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDL--------FEIFNNLILNNRVNFFFFTLCGFL 232
Cdd:PRK12667 152 LVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirglsFPLTGGLAGNPPLALGVALALALW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 233 LFVGpiaKSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPS--------IMYIISLIGIITVL 303
Cdd:PRK12667 232 AFTI---KAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPslidfraaLSPILIILGAVSAI 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 304 LGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQN 380
Cdd:PRK12667 308 IGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRD 378
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 221272275 381 MILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKdEILNDSLLFS--PIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK12667 379 IDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-449 |
1.57e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 181.23 E-value: 1.57e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 14 IPLPVPI-LLGVGLLLFPTATKNLRRIWTFLsIFLLSIVMIFSLYlsIQQIFISCIHQNVWSWtiNNEFSFEFGyfIDPL 92
Cdd:PRK08375 6 LPLLVAVpLLAAALIVLLPKRRRLRWALALL-VAALTFALAISLL--PQVLDGGVIAYVVGGW--PPGIGIELR--ADSL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 93 TSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRpVAA 172
Cdd:PRK08375 79 SALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDR-RAL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 173 NACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNlilNNRVNFFFFtlcgfLLFVGPIAKSAQFPLHVWLPD 252
Cdd:PRK08375 156 AAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAE---NPTVVTAFG-----FVLLALALKAAVFPLHTWLPR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 253 AMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:PRK08375 228 AYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 328 GYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLS 404
Cdd:PRK08375 308 GYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASLS 378
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 221272275 405 LCGIPPLACFWSKDEIL---NDSLLFSPIFAIIACSTagLTAFYMFRI 449
Cdd:PRK08375 379 LIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
1.13e-48 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 178.74 E-value: 1.13e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 18 VPILLGVGLLLFPTATKNLRRIWTFLS---IFLLSIVMIFSLYLSIQQIfiscihQNVWSWTINNEFSFEFGYFIDPLTS 94
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGGF------QFVESYPWIPSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 95 IMSILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFW--FTRPVAA 172
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 173 NacqKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIFNNLILNNRVNFFFFtlcgfLLFVGPIAKSAQFPLHVWLPD 252
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 253 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFiviP----SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF---PeasaYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 327 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTL 403
Cdd:COG1008 311 MGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAAL 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 221272275 404 SLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 459
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-456 |
2.81e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 178.75 E-value: 2.81e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 169 PVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDL-FEIFNNLILNNRVNFFFFTlcGFLLFvgpiaKSAQFPLH 247
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFI--AGLAM-----KSGAVPVH 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 248 VWLPDAM-EGPTPISALIHAATmvAAGIFLVAR-LLPLF---IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYS 322
Cdd:PRK08376 241 MWLPDAYpAAPSSISAMLLVIK--QAGLYALARvLFSIYgpaINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYH 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 323 TMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGL 387
Cdd:PRK08376 319 SVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYET---------GTRNLNELGGL 389
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 221272275 388 TKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-449 |
1.47e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 155.27 E-value: 1.47e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPTATKNL-RRIWTFLSIFLLSIVMIFSLylsiqqifiscihqnvWSWTINNEFSFEFGYF 88
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRsRRLLAGLALLGLLLALALLL----------------LALGGGTGTAFGGMFV 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTS-MLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFT 167
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 168 RPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNFF--FFTLCGFLLfvgpiaKSAQFP 245
Cdd:COG1007 148 DRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLLglVLVLAGLAF------KLSAVP 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 246 LHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYS 322
Cdd:COG1007 222 FHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 323 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFL 399
Cdd:COG1007 301 SIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLALAMT 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 221272275 400 IGTLSLCGIPPLACFWSK----DEILNDSLLFspiFAIIACSTAGLTAFYMFRI 449
Cdd:COG1007 373 IFLLSLAGIPPTAGFFGKfyvfSAAVEAGLYW---LAVIAVLNSVISAYYYLRV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
2.76e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 157.74 E-value: 2.76e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFN----TSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEG--KGPGAMGFFYnlflASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 165 WFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeifnnlILNNRVNFFFFTLCGFLLFVGPIAKSAQF 244
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLLPLFIVIPSIM--YIISLIGIITVLLGATLALAQKDIKRGLAY 321
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWwgVLVLALGAISAVLGVLYALAEHDLKRLLAY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 322 STMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMILMGGL 387
Cdd:PRK06521 307 STIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRDMEKLGGL 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 388 TKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNdSLLFS------------PIFAIIACSTAGLTAFYMFRIYLLTFE 455
Cdd:PRK06521 378 IRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQ-SLLSSpglpqwglklavPIAAAMLALTAALAAMCFVKFYGITFL 456
|
.
gi 221272275 456 G 456
Cdd:PRK06521 457 G 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
1.20e-38 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 150.62 E-value: 1.20e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIFSLYLSIQqifiscihqnvWSWTINNEFSfefgyfI 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATG-----------AAWPAAAWLE------V 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 90 DPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 170 VAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVnffffTLCGFLLFVGPIAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGASPSL-----QAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 221272275 330 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-449 |
2.75e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 146.11 E-value: 2.75e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPTATKNLRRIWTFLSIflLSIVMIFSLYLSIQQIFISCIHQNvwsWTINNEFSFEFGYFI 89
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATKKDSFIRNFLLI--TISIFFFGNILLIDLLFLKGIRAQ---FELMDFGNYSIGLHL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 90 DPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFfAYMGFFNTSML---GLVTSSNLIQVYFFWELVGMCSYLLIGFWF 166
Cdd:PRK06589 82 EPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCYELLTISTAFLIGHTR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 167 TRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQ--DLFEIFNNLILnnrvnfffftlcgFLLFVGPIAKSAQF 244
Cdd:PRK06589 161 NNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVsgGLFSKNQSIIL-------------LLMFIYGIAKTAIF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLpLFIVIPSIMYII-------SLIGIITVLLGATLALAQKDIKR 317
Cdd:PRK06589 228 PVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIfaefnwlIFIPIVSIFYSSLKALKTDNIKK 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 318 GLAYSTMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPIT 394
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLI 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 395 KTAFLIGTLSLCGIPPLACFWSKDEIL-----NDSLLFSPIFAIIACSTAGLTAFYMFRI 449
Cdd:PRK06589 378 SFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKI 437
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-449 |
3.07e-37 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 145.73 E-value: 3.07e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPTATKN--LRRIWTFLSIFLLSIVMIFSLYLSIQQIFiscihqnvwswtinnefsFEFGY 87
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRhsRRATLAVLALLLALVALLFVLGAAGGGTA------------------FGGML 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 88 FIDPLTSIMSILITTVGILVLIYSDNYMShDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK05777 70 VVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 168 RPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNFFfftlcGFLLFVGPIA-KSAQFPL 246
Cdd:PRK05777 149 RRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLF-----GLVFLLVGLAfKLSAVPF 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 247 HVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLLPLFI--VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYST 323
Cdd:PRK05777 224 HMWTPDVYEGaPTPVTAFLATAPKIAA-FAVLLRLLVVAFggLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 324 MSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmilMGGLTKHVPITKTAFLI 400
Cdd:PRK05777 303 IAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMTI 374
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 221272275 401 GTLSLCGIPPLACFWSKDEILNDSLLFSPIF-AIIACSTAGLTAFYMFRI 449
Cdd:PRK05777 375 FMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWlAVIGVLNSAIGAFYYLRV 424
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
49-417 |
3.83e-36 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 144.75 E-value: 3.83e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 49 SIVMIFSLYLSIQQIFISCI--HQNVWSWTINNEFSFEFGYfidpLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFA 126
Cdd:PRK08668 29 VIGNALPLLFLIKLYFTLKVgtGEKLTLFFGGFKLTFTLTH----LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 127 YMGFfnTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRpvAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQ 206
Cdd:PRK08668 105 LMSL--AGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFA 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 207 DLFEIFNNLILNNRVNFFFFTLCGFllfvgPIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP- 282
Cdd:PRK08668 181 DISQGLINDTSTGFALIVFLFLLAF-----GVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPg 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 283 --------LFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY 351
Cdd:PRK08668 256 tklfsefgTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHAL 335
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 221272275 352 SKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 336 FKGLFFLIFAAVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-459 |
4.62e-34 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 136.87 E-value: 4.62e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 8 SWIIpFIPLpvpilLGVGLLLFptATKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNEFSFEFGY 87
Cdd:PRK05846 7 SLLI-FLPL-----IGGLLVLL--TERFGARLARWIALIGTLLTLLLSLVLWIGFDSSNAGFQFVEKHPWIPRFGISYHL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 88 FIDPLTSIMSILITTVGILVLIYSDNYMSHDQGylRFFAYMGFFNTSMLGLVTSSNLIQVYFFWE--LVGMcsYLLIGFW 165
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGVW 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 166 --FTRPVAANacqKAFVTNRVGDFGLLLGILGLYWI----TGSFEFQDLfeifnnliLNNRVNFFFFTLCGFLLFVGPIA 239
Cdd:PRK05846 155 ggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFIAFAV 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIPSIM-YIISLIGIITVLLGATLALAQKDIKR 317
Cdd:PRK05846 224 KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFaPIIITLGVIAIIYGALVALAQTDIKK 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 318 GLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPIT 394
Cdd:PRK05846 304 LIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKVMPVL 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221272275 395 KTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLN 459
Cdd:PRK05846 375 AAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
1.75e-33 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 136.78 E-value: 1.75e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 20 ILLGVGLLLFPTATK---NLRRIWTFLSIFLLSIVMIFSLYLSIQQIFIScIHQNVWSWTINNEFSFEFgyFIDPLTSIM 96
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLVIAIALLLFAGSLQLFTG-NPLDIPLWGIAPGLDITF--HIDRLAAFF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 97 SILITTVGILVLIYSDNYMSHDQGYLR---FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAAN 173
Cdd:PRK08667 83 IILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 174 ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLfeifnnlilnnRVNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDA 253
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 254 MEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPSIMY--IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYM 330
Cdd:PRK08667 232 HPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWWgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGII 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 331 MLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMILMGGLTKHVPITKT 396
Cdd:PRK08667 310 LMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTSA 380
|
410 420
....*....|....*....|.
gi 221272275 397 AFLIGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASE 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-456 |
3.94e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 133.91 E-value: 3.94e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 18 VPILLGVGLLLFPTATKNLRRIWTFLSIF--LLSIVMIFSLYlSIQQIFISCIHQNVWSWTINNEFSFEfgyfIDPLTSI 95
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVVALatLLLSLLLLFQF-DPTGSGFQFTEDIPWIPALGISYHLG----VDGISLL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 96 MSILITTVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWfTRPVAANAC 175
Cdd:TIGR01972 82 LVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 176 QKAFVTNRVGDFGLLLGILGLYWITG-SFEFQDLfeifNNLILNNRVNFFFFtlcgFLLFVGPIAKSAQFPLHVWLPDAM 254
Cdd:TIGR01972 159 MKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLEL----LNLPLPFGVQTWLF----LAFFIAFAVKVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 255 -EGPTPISALIHAATMVAAGIFLVARLLPLFiviP----SIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLF---PdaslYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGF 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 330 MMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLC 406
Cdd:TIGR01972 308 VLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 221272275 407 GIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:TIGR01972 379 GLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-456 |
1.16e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 132.00 E-value: 1.16e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 19 PILLGVGLLLFPTATKNLRRIWTFLSiFLLSIVMIFSLYLSiqqifiscihqnVWSWTINnefsFEFGYFIDPLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVS-AVYALGLVASMVPL------------ELTLLDN----FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 99 LITTVGILVLIYSdnyMSHDQGYLrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKA 178
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 179 FVTNrVGDFGLLLGILGLYWITGSFEFQDLFEifnnlilnnrVNFFFFtlcgFLLFVGPIAKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK07234 151 FYSN-VAMLFYLIGAVLVYQANGTFAFSGLAT----------ADPEAF----ALIALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 259 PISALIHAATMVAAGIFLVARLLplfIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGs 338
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCA---LDVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 339 yrsALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITktaflIGTLSLCGIPPLACFWSKD 418
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*...
gi 221272275 419 EILNDSLlfsPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07234 354 LTLKNLL---PWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
42-478 |
1.80e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 129.65 E-value: 1.80e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 42 FLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWTINNEFsfefgyfidpLTSIMSILITTVGILVLIYSDNYMSHDQGY 121
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYF----------NSLLFSLILLLVTLSVLVFSSYYMNGELNF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 122 LRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTrpvaANACQKA---FVTNRVGDFGlllgilglyw 198
Cdd:MTH00095 76 NYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNN----WDSNSGAmntALTNRIGDFF---------- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 199 itgsfefqdLFEIFNNLILNNRVNFFFFTLCG---FLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF 275
Cdd:MTH00095 142 ---------IFLFFSGFIFSSYYFFSFSFFSSsmiLMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLI 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 276 LVARLLPLFIVIpSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKAL 355
Cdd:MTH00095 213 LLMNFSYLILNM-NVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSC 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 356 LFLGSGSIIHSMEAivgyspdkSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLL--FSPIFAI 433
Cdd:MTH00095 292 LFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSL 363
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 221272275 434 IACSTAGLTAFYMFRIYLLTFeghLNTYFLNYSGKKSRSFYSLSL 478
Cdd:MTH00095 364 MFFFSVFLTFGYSYRLWKSFF---LSFSKVVNVYSSSVLMNFLSL 405
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-416 |
1.80e-30 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 125.81 E-value: 1.80e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPtatknLRRIWTFLSIFLLSIVMIFSLYLSIQQIfiscIHQNVWSWtiNNEFsfefgyFI 89
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVP----DAGEIFAA--GLWF------FI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 90 DPLTSIMSILITTVGILVLIYSDNYMSHDQ-------GYLRFfaYMGFFNT---SMLGLVTSSNLIQVYFFWELVGMCSY 159
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLSSA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 160 LLIGFWFTRpVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNF--------FFFTLCGF 231
Cdd:PRK06458 146 LLVGIYRTR-ASLEAAWKYIIICSVGVAFALFGTILVYANAATVMGDGEMAILWTELLKHASLLdptlmklaFVFLLIGF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 232 LLFVGpiaksaQFPLHVWLPDA-MEGPTPISALihaatmvaagifLVARLLP--LFIVI--------------PSIMYII 294
Cdd:PRK06458 225 GTKVG------LFPMHAWLPDAhSEAPSPVSAL------------LSGVLLNvaLYAVLryyilidaaigsdfPGRLLLI 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 295 slIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMeaiv 371
Cdd:PRK06458 287 --FGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---- 360
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 221272275 372 gyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWS 416
Cdd:PRK06458 361 -----GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
137-421 |
2.90e-28 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 119.49 E-value: 2.90e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 137 GLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPvAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLi 216
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTI- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 217 lNNRVNFFFFTLcgflLFVGPIAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIP---SIMY 292
Cdd:PRK08377 201 -DPTVAQVGLAL----LIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 293 IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSMea 369
Cdd:PRK08377 275 LVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-- 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 221272275 370 ivgyspdKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08377 353 -------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-473 |
6.60e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 117.74 E-value: 6.60e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 10 IIPFIPLPVPILLGVGLLLFPTATKNLRRiwtflSIFLLSIVMIFSLYLSIQQIFIscihqnVWSWTINNEFSFEFgYFI 89
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKR-----NPLLLKNLSYIVLLSALVSLFL------TLQYAAYLFTGFSF-FIV 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 90 DPLTSIMSILITTVGILVLIYSDNYMSHDQ-GYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTR 168
Cdd:TIGR01770 69 DNFALLIKLILLLSTLLTFFFALSYLSKEKiNKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 169 PVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNrvNFFFFtlcGFLLFVGPIA-KSAQFPLH 247
Cdd:TIGR01770 149 RFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNI--SLLLL---GIVLILVGLLfKLSAVPFH 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 248 VWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMS 325
Cdd:TIGR01770 224 MWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSIS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 326 QLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSIIHSMEAIVGYSPDksqNMILMGGLTKHVPITKTAFLIGT 402
Cdd:TIGR01770 304 HVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFM 376
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221272275 403 LSLCGIPPLACFWSKDEILnDSLLFSPIF--AIIACSTAGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSRSF 473
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVF-FALLKSGLYwlAVIAVLTSVIGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
7.83e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 115.05 E-value: 7.83e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 14 IPLPVPILLGVGLLLFptatKNLRRIWTFLSIFLLSIVMIFSLYLsIQQIFISCIHQ-NVWSWtinnEFSFEFGYFIDPL 92
Cdd:PRK07691 8 LPILIPVITAILLIFL----GKRPIIQRYVALIGSLLTLVAAIIL-VANVYKHGIQTlELGNW----KAPFGIVFVADMF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 93 TSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRpVAA 172
Cdd:PRK07691 79 AALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 173 NACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVnffFFTLCGFLLFVGPIAKSAQFPLHVWLPD 252
Cdd:PRK07691 158 RESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 253 AMEGP-TPISALIhAATMVAAGIFLVARLLPLFIV--IPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK07691 235 SYYAPpIAIAALF-GALLTKVGVYAIARTFTLFFShdTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGV 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 330 MMLALGMG---SYRSALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmilMGGLTKHVPITKTAFLIGTLSLC 406
Cdd:PRK07691 314 ILVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLA 384
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 221272275 407 GIPPLACFWSKDEILNDSLLF-SPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK07691 385 GIPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
1.43e-24 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 108.20 E-value: 1.43e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGF--FNTSMLGLvtSSNLIQVYFFWELVGMCSYLLIGFWF 166
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 167 TRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGsfEFQDLFEIFNNLILnnRVNFFFFTLCGFLLFVGPIAKSAQFPL 246
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATG--EWQLTSVLSNENLA--QLGTWEKTGINLLLILAVMIPAAQWPF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFI-VIPSImyIISLIGIITVLLGATLALAQKDIKRGLAYSTMS 325
Cdd:PRK08601 224 QRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQI--LLLIFASISVLIGTGISLVQVDYKRQLVGSTMA 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221272275 326 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGGL 387
Cdd:PRK08601 301 QMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-454 |
3.47e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 106.96 E-value: 3.47e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 8 SWIIpFIPLPVPILLGVGLLLFptatKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFISCIHQNVWSWtinnEFSFEFGY 87
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGLVLVFL----RNRDRLQRYLAIGTLTILTLISLALLIYVQRHGPITLDFGGW----LPPFGIQF 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 88 FIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFT 167
Cdd:PRK12663 74 TGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 168 RpVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLilnnRVNFFFFTLCGFLLFVGPIaKSAQFPLH 247
Cdd:PRK12663 154 R-EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----GDTATLTTIALLFLLAFGM-KAALFPFM 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 248 vWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPSIMY-IISLIGIITVLLGATLALAQKDIKRGLAYSTM 324
Cdd:PRK12663 228 -WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQVI 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 325 SQLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmilMGGLTKHVPITKTAFLIG 401
Cdd:PRK12663 306 SSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFLIL 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 221272275 402 TLSLCGIPPLACFWSKDEILNDSL-LFSPIFAIIACSTAGLTAFYMFRIYLLTF 454
Cdd:PRK12663 377 IFAIGGLPPFSGFWGKVLLVQGALdNGAYILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
5.85e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 106.50 E-value: 5.85e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 44 SIFLLSIVMIFSLYLSIQQIFISCIHQNVWSwtiNNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVSLNFLS---FGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 124 FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTrPVAANACQKAFVTNRVGDFGLLLGILGLYWITgsf 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGG--- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 204 efqdlfeifnnlilnnrVNFFFFTLCGFLLFvgpIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlLPL 283
Cdd:MTH00063 154 -----------------SGSFLCCLFFFLIV---FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 284 FIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 364 ihsmeaIVGYSPDKSQNMILMGGLTKHVPITKTAFLIgtLSLCGIPPLACFWSKDEILND--SLLFSPIFAIIACSTAGL 441
Cdd:MTH00063 293 ------MSGSGGSQSSNCVYSSILYGSWNLFYLFLLV--LGLSGVPFIGVFFSKHFLLSSfsSVVFNVSLLLVVILCVFL 364
|
410
....*....|...
gi 221272275 442 TAFYMFRIYLLTF 454
Cdd:MTH00063 365 SYLYSFRLCLILF 377
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
89-417 |
1.20e-22 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 102.67 E-value: 1.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSdnYMSHDQG-YLRFFAYMGffntSMLGLVTSSNLIQVYFFWELVGMCSYLLIgfWFT 167
Cdd:PRK12668 65 VDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--WAR 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 168 R-PVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFqDLFEIFNnlilnnrvnffffTLCGFLLFVGPIAKSAQFPL 246
Cdd:PRK12668 137 GtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFivipsimYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:PRK12668 203 HAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGT-------ELLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQ 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 327 LGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMILMGGLTKHVPITKTAFLIGTL 403
Cdd:PRK12668 276 VGYMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVGAL 346
|
330
....*....|....
gi 221272275 404 SLCGIPPLACFWSK 417
Cdd:PRK12668 347 SISAFPLFSGFVSK 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-449 |
1.59e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 95.57 E-value: 1.59e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 89 IDPLTSIMSILITTVGILVLIYSdNYMSHDQ----GYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGF 164
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 165 WFTRPvAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNfffftLCGFLLFVGPIAKSAQF 244
Cdd:PRK12662 153 GRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQ-----IGVLFIMVGLFIKAALF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKR 317
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 318 GLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSIIHsmeaivGYSPDKSQNMIlmgGLTKHVPIT 394
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISY------HFGTTKLEDCL---NLWKSMPKI 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 221272275 395 KTAFLIGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACStaGLTAFYMFRI 449
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
227-417 |
1.85e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 89.26 E-value: 1.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 227 TLCGFLLFVGPIAKSAQFPLHVWLPDAM-EGPTPISAlIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIGIITVLLG 305
Cdd:PRK12665 209 TALFAVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMI 382
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVGLI----ERQAG-----SSSLR 358
|
170 180 190
....*....|....*....|....*....|....*
gi 221272275 383 LMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 417
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGK 393
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
139-456 |
5.36e-18 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 88.35 E-value: 5.36e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 139 VTSSNLIQVYFFWELVGMCSYLLIGfwftrpvaanaCQKA----FVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNN 214
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 215 LILNNRVnfFFFTLCGFLLFVGPIaksaqfPLHVWLPDAMEGPTPISALIHAATMVAAGIF------LVARLLPLFIVIp 288
Cdd:PRK08042 176 LPLGSDI--WLLGVIGFGLLAGII------PLHGWVPQAHANASAPAAALFSTVVMKIGLLgiltlsLLGGNAPLWWGV- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 289 simyIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKA 354
Cdd:PRK08042 247 ----ALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKS 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 355 LLFLGSGSIIHSmeaiVGYspdksQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI------LNDSLLF- 427
Cdd:PRK08042 323 VLFLGAGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFv 393
|
330 340 350
....*....|....*....|....*....|...
gi 221272275 428 ----SPIFAIIACSTAGLTAFYMFRIYLLTFEG 456
Cdd:PRK08042 394 arllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-451 |
7.28e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 87.46 E-value: 7.28e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 16 LPVPILLGVGLLLFPTATKNLRRIWTFLS--IFLLSIVMIFSLYLSIQQIFISCIHQnvWSWTINneFSFEFGyfIDPLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQFQEYLP--WNEPLG--LSYSLG--VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 94 SIMSILITTVGILVLIYSDNYMSHDQGYlrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPvAAN 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 174 ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIFNNLILNNRVNFFFFTLCGFLLfvgpiaKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGI------KIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 254 MEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPSIMYIIS----LIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 329 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMILMGGLTKHV---PITKTAFLIGT 402
Cdd:PRK07363 309 YILVAAAAGTQLSllgAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLMNPIrglPLTSALLVLAG 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 221272275 403 LSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYmFRIYL 451
Cdd:PRK07363 380 MASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-436 |
3.47e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 80.84 E-value: 3.47e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 134 SMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQdlfeiFN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLS-----YI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 214 NLILNNRVNFF-FFTLCGFLLFVGPIA-KSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPSI 290
Cdd:MTH00196 80 NLVLNSGQSFSsVSVPIGYLLIIVALLfKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 291 MYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsiihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 221272275 368 eAIVGYSPDKSQnMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIAC 436
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-446 |
1.01e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.57 E-value: 1.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 87 YFIDPLtSIMSILITTVG-ILVLIYSDNYMSH-------DQGYLRFFaYMGFfntSMLGLVT-----SSNLIQVYFFWEL 153
Cdd:PRK08676 59 LFIDHL-GIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIFAEL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 154 VGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWI-----TGSFEFQDLfeIFNNLILNNRVNFFFFTL 228
Cdd:PRK08676 134 TTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTEL--AAHASLLSPSVLGASFLF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 229 cgflLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPSIMYIISLIGIITVLL 304
Cdd:PRK08676 212 ----IFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 305 GATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDKSQNm 381
Cdd:PRK08676 287 AAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDRFDR- 359
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 382 ilMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSP-----IFAIIACSTAGLTAFYM 446
Cdd:PRK08676 360 --IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVwlvlaVLLLLLLAASSFAIFLL 427
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
230-453 |
1.76e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 79.69 E-value: 1.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 230 GFLLFVGpiAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFLV----------ARLLPLFIVIPSIMYIIslIG 298
Cdd:PRK12561 190 GFLIAFG--VKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLKmggyalirfnVQMLPDAHVYFAPALAI--LG 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 299 IITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLGSGsiihsmeaiVGY 373
Cdd:PRK12561 259 VVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMISHGLIAAALFFLTG---------VTY 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 374 SPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIacsTAGLTA--FYMFR 448
Cdd:PRK12561 328 ERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSSDVYSSTFRTI---TILLAAvgLILTP 404
|
....*
gi 221272275 449 IYLLT 453
Cdd:PRK12561 405 IYLLS 409
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
124-464 |
2.44e-15 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 79.36 E-value: 2.44e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 124 FFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSF 203
Cdd:PRK06473 109 YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 204 EFQDLFEIFNNLILNNRVNFFFFTLCGFLLfvgpiaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVAR--- 279
Cdd:PRK06473 188 SFDYEPLRSHTLPLSTQLLLLAPILVGFGI------KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgv 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 280 -LLPLFIVIpsIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKAL 355
Cdd:PRK06473 261 gLFPEAWVY--LAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISAL 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 356 LFLGSGsiihsmeaiVGYSPDKSQNMILMGGL---TKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFA 432
Cdd:PRK06473 339 LFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQT 409
|
330 340 350
....*....|....*....|....*....|..
gi 221272275 433 IIACSTAGLTAFYMFRIYLLTFEGHLNTYFLN 464
Cdd:PRK06473 410 LLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
22-417 |
2.69e-15 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 79.28 E-value: 2.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 22 LGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIF-------SLYLSIQQIFIScIHQNVWSWTINNEFSFEFGYFIDPLTS 94
Cdd:CHL00049 4 KAFHLLLFDGSFIFPECILIFGLILLLMIDLTSdqkdipwLYFISSTSLVMS-ITALLFQWREEPMISFSGNFQTNNFNE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 95 IMSILITTVGILVLIYSDNYMSHDQGYLRFFayMGFFNTSMLG---LVTSSNLIQVYFFWELVGMCSYLLIGFwFTRPVA 171
Cdd:CHL00049 83 IFQFLILLCSTLCIPLSVEYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 172 AN-ACQKAFVTNRVGDFGLLLGILGLYWITGSfEFQdLFEIFNNLILNNRVNFFFFTLCGFLLFVGPIAKSAQFPLHVWL 250
Cdd:CHL00049 160 SNeATMKYLLMGGASSSILVYGFSWLYGLSGG-EIE-LQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 251 PDAMEG-PTPISALIhAATMVAAGIFLVARLLPlfIVIPSIM----YIISLIGIITVLLGATLALAQKDIKRGLAYSTMS 325
Cdd:CHL00049 238 PDVYEGsPTPVVAFL-SVTSKVAASALATRIFD--IPFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 326 QLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMILMGGLTKHVPITKTAFLIGTLSL 405
Cdd:CHL00049 315 QIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSL 389
|
410
....*....|..
gi 221272275 406 CGIPPLACFWSK 417
Cdd:CHL00049 390 GGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
75-417 |
4.59e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 78.55 E-value: 4.59e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 75 WTINNEFSFeFGYFI-DPLTSIMSILITTVGILVLIYSDNYMshDQGYLRFFAYMGFFNTSMLG---LVTSSNLIQVYFF 150
Cdd:PRK02504 62 WDNPNPISF-LGSFNaDNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGATELVMIFIS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 151 WELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFefQDLFEIFNNLILNNrvnffffTLCG 230
Cdd:PRK02504 139 LETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS--TQLSAIALALITSP-------SLGL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 231 FLLFVGPIA----KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPSI----MYIISLIGIIT 301
Cdd:PRK02504 210 ALALVFVIAgiafKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFdeqwKLLFTALAILS 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 302 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITH------AYSKALLF-LGSGSiihsmEAIV 371
Cdd:PRK02504 287 MVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT-----DQIS 361
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 221272275 372 GYSpdksqnmilmgGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK 417
Cdd:PRK02504 362 DYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
9.79e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 77.38 E-value: 9.79e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 87 YFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLrFFAYMGFfnTSMLGLVTSSNLIQVYFFWELVGMCSyllIGFWF 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGL--ASVSAIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 167 TRPVAAN--ACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDlfeIFNNLILNNRVNFFFFTLcgFLLFVGPIAKSAQF 244
Cdd:PRK06277 142 ASGTEEAykAALKYMILGNVAGSILLLGIGFLLASTGTLNITD---IHNALLVNPTSPVIYGGL--LLLIFGLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLA 320
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 321 YSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTA 397
Cdd:PRK06277 296 YHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVAFM 366
|
330 340
....*....|....*....|
gi 221272275 398 FLIGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
43-421 |
7.30e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 74.67 E-value: 7.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 43 LSIFLLSIVMIFSLYLSIQQIFIScIHQNVWSWTINNEFSFEFGYFIdpltsIMSILITTVGILVLIYSDNYMSHDQGYL 122
Cdd:MTH00199 24 LSTLKLSIGVLLLIGLIVELNSLN-LFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 123 RFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGS 202
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 203 FEFQDlfeifNNLILNNRVNFFFFTLCgfLLFvgpiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarll 281
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 282 PLFIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFL 358
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221272275 359 GSGSIIHSMEAIVGYspdksqnMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
3.12e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 64.37 E-value: 3.12e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 221272275 75 WTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
232-445 |
1.90e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 67.18 E-value: 1.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 232 LLFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLF----------IVIPSIMYiislIGII 300
Cdd:PRK12666 215 LLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLfgpeagasagFGQDWLLP----GGLA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 301 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL-----------GSGSIIHS 366
Cdd:PRK12666 289 TLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVT 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 367 MEAivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSK----DEILNDS-----------LLFSPIF 431
Cdd:PRK12666 369 PEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKfallQALLNPPgagaawwlwalVLLSGLA 445
|
250
....*....|....
gi 221272275 432 AIIACSTAGLTAFY 445
Cdd:PRK12666 446 ALIALTRAGIRLFW 459
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
1.00e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 64.88 E-value: 1.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllplfIVIPSIMYIIslIGIITVLLGATLALAQKDIKRG 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS------LVITSKLLLS--VAIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 319 LAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMILMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 221272275 387 LTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFS-----PIF---AIIACSTAGLTAFYMFRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIAfssslSIYylvALFAIICTCISAFYYIRI 533
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
2.58e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 63.40 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 175 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFEIfNNLILNNRVNFFFFTlcgflLFVGPIAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFLG-----IFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 254 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 333 AL---GMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 221272275 410 PLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
221-453 |
5.65e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 59.34 E-value: 5.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 221 VNFFFFTLCGFLLFVGpiAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLPLFIVIPSI 290
Cdd:PRK02546 209 LGFQLLCYAGLLIAYG--VKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPDAHAQFAP 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 291 MYIIslIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgsiih 365
Cdd:PRK02546 281 LLIV--LGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF------- 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 366 smeaIVGYSPDKSQNMIL--MGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEI---LNDSLLFSPIFAIIACSTAG 440
Cdd:PRK02546 350 ----LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAA 425
|
250
....*....|...
gi 221272275 441 LTAFyMFRIYLLT 453
Cdd:PRK02546 426 VGVI-LTPIYLLS 437
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
43-409 |
1.22e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 58.15 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 43 LSIFLLSIVMIFSLYLSIQQIFISCIhqnvwSWTINNEFSFEFGYFIDPLTSI------MSILITTVGILVLIYSDNYMS 116
Cdd:MTH00204 37 LAILFSTLVLWGAFDGEGQFQFINLI-----EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFLF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 117 HDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGL 196
Cdd:MTH00204 112 KE-----FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQL 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 197 YWITGSFEFQDLfeifnnLILNNRVNFFFFTLCGFllFVGPIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIF 275
Cdd:MTH00204 187 YSITGTTDYQIL------LNIKLPLSIQKWLLVGF--FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYG 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 276 LVARLLPLFIVIPSIMY-IISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAY 351
Cdd:MTH00204 259 FLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGF 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 221272275 352 SKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIP 409
Cdd:MTH00204 339 VSSALFIAVTFL---------YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-453 |
1.38e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 57.14 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarllpLFIVIPSI-MYIISLIGIITVLLGATLALAQKDIKRGLAYST 323
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 324 MSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMILMggLTKhVPITKTAFLIGTL 403
Cdd:MTH00112 184 IAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLTLL 249
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 221272275 404 SLCGIPPLACFWSKDEILND--SLLFSPIFAIIACSTAGLTAFYMFRIYLLT 453
Cdd:MTH00112 250 SLAGLPPLTGFMPKWLILQEltKQNMTPTATIMAMLSLLSLFFYLRLTYIST 301
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-478 |
1.76e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 57.64 E-value: 1.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 20 ILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIFSLYLSIQQIFIScihqnvwswtinnefSFEFGYFIDPLTSIMSIL 99
Cdd:MTH00206 3 LIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWS---------------FSNLYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 100 ITTVGILVLIYSDNYMsHDQGYLRFFAYMGFFNTSMLGLV---TSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQ 176
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 177 KAFVTNRVGDFGLLLGILGLYWITGSFEFqdLFEIFNNLILNNRVNFFFFTLCGFLlfvgpiAKSAQFPLHVWLPDA-ME 255
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSLSL--YILYFSKLTTWNNNLWWLACILAFL------VKLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 256 GPTpisalihAATMVAAGIFL------VARLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:MTH00206 219 APV-------AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 329 YMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLS 404
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 221272275 405 LCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSRSFYSLSL 478
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFL 435
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-435 |
1.33e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 54.12 E-value: 1.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 222 NFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiviPSIMYIISLIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDL----YWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 302 VLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 221272275 382 ILMGGLtkhvpitktafligtLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIA 435
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
221-449 |
1.72e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.82 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 221 VNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGII 300
Cdd:MTH00200 86 ISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLGLL 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 301 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKSQN 380
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNSTK 226
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 381 MILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFS-PIFAIIACSTAGLTAFYMFRI 449
Cdd:MTH00200 227 INSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
43-411 |
1.77e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 54.41 E-value: 1.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 43 LSIFLLSIvmIFSLYLSIQQIFISCIHQNVWSWTINNEFSFEFGYFidpltsimSILITTVGILVLIYSDNYmSHDQGYL 122
Cdd:PRK06459 6 LPVFLISI--LLSIFNKKASYILTMISSIILLITSIYEYNGVLSFF--------SIISTIVWILASLYSIEY-DHYGKWL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 123 RffAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWftrpvaANACQKAFVTNRVGDFGLLLG---ILGLYWI 199
Cdd:PRK06459 75 S--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KKNKRPAFVFMAFGELSTVLIlagFAWAFII 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 200 TGSFEFQDLFEIFNNLILNnrvnfffftlcgfllfVGPIAKSAQFPLHV--WLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:PRK06459 147 SGTTNFSYLPSPVPLILAS----------------FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGI 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 278 ARLLPLFIVIPS--IMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM--------GSYR-----SA 342
Cdd:PRK06459 211 LKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLymvtkqliTSIEhfsliTV 290
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 221272275 343 LFHLITHAYSKALLFLGSGsiiHSMEAIVGYSPDKSQNMILMGGltkhvpitktafLIGTLSLCGIPPL 411
Cdd:PRK06459 291 ILYSFAHSVAKTGLFLSSG---LQEKQSITYSKKIRNRWIELGL------------TLLASSLSGLLPN 344
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
20-461 |
3.35e-07 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 53.59 E-value: 3.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 20 ILLGVGLLLFPTATKNLRRIWTFLSIFLLSIVMIfsLYLSIQQIFIScihqnvwswtINNEFSFefgyfIDPLTSIMSIL 99
Cdd:MTH00014 5 IMPLISLLLLPLIKYPWSWALTFSTLLLLSLFTL--LNLYPMSAPYS----------MFTESLS-----SDMLSAPLITL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 100 ITTVGILVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANAcqkaf 179
Cdd:MTH00014 68 TLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQA----- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 180 vtnrvgdfgllLGILGLYWITGSFEFqdLFEIFNNLILNNRVNFFFFT----------LCGFLLFVGPIAKSAQFPLHVW 249
Cdd:MTH00014 143 -----------SFYLMIYTVTASLPL--LMSILLIFYTNNSLSMLMSSmeppsiylmnLWWLITILAFMVKMPLYTVHLW 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 250 LPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVI-----PSIMYIISLIGIITVLlgatLALAQKDIKR 317
Cdd:MTH00014 210 LPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHInkslsAPFSSISLVGAVITSL----ICIRQPDLKS 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 318 GLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMILMGGLTKHVPIT 394
Cdd:MTH00014 279 LIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLCSSALFALANMT---------YETTHTRSLFLTKGLLSLFPTM 349
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 221272275 395 KTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTY 461
Cdd:MTH00014 350 TMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSF 416
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
43-458 |
8.05e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.23 E-value: 8.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 43 LSIFLLSIVMIFSLYLS----------IQQIFISCIHQNvWSWTINNEFSFEFGYF-IDPLTSIMSILITTVGILVLIYS 111
Cdd:MTH00068 2 LKIIIPTLMLLPTTWLSpkkwlwtlttTNSLIIAFLSLM-WFNLPSETMNFTNKYFgIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 112 DNYMS-----HDQGYLrffAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQK-AFVTnRVG 185
Cdd:MTH00068 81 QNHLKnepinRQRTYI---SMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYfLFYT-LAG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 186 DFGLLLGILGLYWITGSFEFQdLFEIFNNLILNNRVNFFFFTLCGFLLFVgpiaKSAQFPLHVWLPDA-MEGPTpisali 264
Cdd:MTH00068 157 SLPLLIALLILQNSLGSLSLI-LLELMSPMQLMTYTNKIWWLACLLAFMV----KMPLYGLHLWLPKAhVEAPI------ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 265 hAATMVAAGIFL------VARLLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG 337
Cdd:MTH00068 226 -AGSMILAAVLLklggygILRISILLTpLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQ 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 338 ---SYRSALFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLAC 413
Cdd:MTH00068 305 tpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPN 374
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 221272275 414 FWSkdEILNDSLLF--SPIFAIIACSTAGLTAFYMFRIYLLTFEGHL 458
Cdd:MTH00068 375 LWG--ELTIMVSLFnwSNWTILITGLGTLITAAYTLYMFLMTQRGPL 419
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
1.16e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 51.21 E-value: 1.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 222 NFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLLPLFIV--IPSIMYIISLIGI 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILafNSSSFMGLLICSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 300 ITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 380 NMILmggltkhvpitktaFLIGTLSLCGIPPLACFWSKDEILNdSLLFSPIFAIIACSTAG--LTAFYMFRIYLLTFegh 457
Cdd:MTH00197 225 NLVF--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILStcFSLYYYLSLAYKSL--- 286
|
250 260
....*....|....*....|.
gi 221272275 458 LNTYFLNYSGKKSRSFYSLSL 478
Cdd:MTH00197 287 ILSNWMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
247-471 |
1.22e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 51.49 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL----PLFIVIPSIMYIISLIGIItvlLGATLALAQKDIKRGLAYS 322
Cdd:MTH00127 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMvmldPLTKELSYPFIILALWGII---MTGSICLRQTDLKSLIAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 323 TMSQLGYM---MLALGMGSYRSALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMILMGGLTKHVPITKTAFL 399
Cdd:MTH00127 291 SVSHMGLVaggILIQTPWGFTGALILMIAHGLTSSALFC---------LANTNYERTHSRTMLLARGLQMILPLMATWWF 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221272275 400 IGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSR 471
Cdd:MTH00127 362 IASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTR 433
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-454 |
2.85e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 50.55 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 87 YFIDPLTSIMSILITTVGILVLIYSDN--------YMSHDQGYLrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 159 YLLIGFWfTRPVAANACQKAFVTNRVGDFGLLLGILGLYWITGSFEFQD----LFEIFNNLILNNRVNFFFftlcgfllf 234
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDiaayLQEHTNSRIITIAIGFFL--------- 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 235 VGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSI----MYIISLIGIITVLLGATLAL 310
Cdd:PRK06591 222 IGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 311 AQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLithayskaLLFLGSGSIIHSMEAIVGYSPDKSQNMILmggltkh 390
Cdd:PRK06591 302 QAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSL--------LLADSINKIALFLIDAYNESYKREPNKVL------- 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 221272275 391 vpitktaFLIGTLSLCGIPPLACFWSKDEI----LNDSLLFSpiFAIIACSTAGlTAFYMFRIYLLTF 454
Cdd:PRK06591 367 -------IIIAIICSCGLPISPLFFIKVNIlellLTQNLLLD--FIIILLSSVG-SLFYHYKMVLLLF 424
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-434 |
8.23e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 48.96 E-value: 8.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 221 VNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipSIMYIISLIGII 300
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 301 TVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSIIHSMEAIvgysp 375
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 221272275 376 dksqNMILMGGLTKhVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAII 434
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
227-433 |
8.34e-06 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 48.77 E-value: 8.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 227 TLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLLPLFIVIPSI-MYIISLIGIITVLLG 305
Cdd:MTH00041 92 TLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILLISISNLLnSNILILCGILSVLVG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqnmilmG 385
Cdd:MTH00041 166 GWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHL--------------N 231
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 221272275 386 GLTKHVPITKTAFLIGTLSLCGIPPLACFWSK-----DEILNDSLLFSPIFAI 433
Cdd:MTH00041 232 KLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
240-398 |
1.57e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.94 E-value: 1.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 240 KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP--LFIVIPSIMyiisLIGIITVLLGA 306
Cdd:CHL00011 224 KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV----IVGAIQIIYAA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 307 TLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQNM 381
Cdd:CHL00011 293 STSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFF-----------LAGTSYDRIRLV 359
|
170
....*....|....*....
gi 221272275 382 IL--MGGLTKHVPITKTAF 398
Cdd:CHL00011 360 YLdeMGGIAIPMPKIFTMF 378
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-353 |
2.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.27 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 95 IMSILITTVGILVLIYSDNYMSHDqgylrFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 175 CQKAFVTNRVGDFGLLLGILGLYWITGSFEFQDLFeifnNLILNNRVNFFFFTlcGFllFVGPIAKSAQFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC----CLKIEKELQYFIFL--GF--FLSLAIKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 254 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLG---- 328
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLLpEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGlvtl 313
|
250 260 270
....*....|....*....|....*....|....*....
gi 221272275 329 --------------YMMLALGMGSyrSALFHLITHAYSK 353
Cdd:MTH00217 314 gifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
232-449 |
2.61e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.00 E-value: 2.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 232 LLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipSIMYIISLIGIITVLLGATLALA 311
Cdd:MTH00011 93 MLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGGMN 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 312 QKDIKRGLAYSTMSQLGYMMLALgMGSYRSALFHLITHAYskallflgsgsIIHSMEAIVGYSPDKSQNMilMGGLTKHV 391
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYII-----------ITTPLMLLFAYLNAFSTKF--NSKISSMS 233
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 221272275 392 PITKTAFLIGTLSLCGIPPLACF---WSKDEILNDSLLFSPIFAIIACSTAGLtaFYMFRI 449
Cdd:MTH00011 234 QTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNL 292
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
215-478 |
1.73e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 41.35 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 215 LILNNRVNFFFFTLCGFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlLPLFIVIPSIMYII 294
Cdd:MTH00160 75 IILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLIL----LSYLINNNFIIIII 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 295 sligIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLIthaYSKALLFLgsgsiihsmeaIVGYS 374
Cdd:MTH00160 151 ----ILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI-----------ILLFN 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 375 PDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILN---DSLLFSPIFAIIACSTagLTAFYMFRIYL 451
Cdd:MTH00160 213 KFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLYFYLRISY 290
|
250 260
....*....|....*....|....*..
gi 221272275 452 LTFegHLNTYFLNYSGKKSRSFYSLSL 478
Cdd:MTH00160 291 SSL--MLNYNKNKWNLKKKKNKFSLIL 315
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
212-476 |
2.33e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 40.98 E-value: 2.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 212 FNNLILNNRVNFFFFTLCGFLLFvgpIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLF 284
Cdd:MTH00150 140 LISSLRKLLSSMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 285 IVIPSIMYIISL-IGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgs 360
Cdd:MTH00150 210 SLSSSSFSIFLIsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF--- 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 361 gsiihsmeAIVGYSPDKSQ--NMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEILNDSLLFSPIFAIIACST 438
Cdd:MTH00150 287 --------CLANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLM 358
|
250 260 270
....*....|....*....|....*....|....*...
gi 221272275 439 AGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSRSFYSL 476
Cdd:MTH00150 359 VFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
245-460 |
6.59e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 39.52 E-value: 6.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 245 PLHVWLPDAMEGPTPISALIHA-----ATMvaAGIFLVARLLPLFIVIpsimyiisLIGIITVLLGATLALAQKDIKRGL 319
Cdd:MTH00070 110 PFHFWLPEVLQGLDLTTGLILStwqklAPM--ALLIQISHLLNSNLLI--------IMGLLSTLIGGWGGLNQTQLRKIM 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 320 AYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgSIIHSMeaivgyspdkSQNMILMGGLTKHVPITKTAFL 399
Cdd:MTH00070 180 AYSSIAHLGWMIIILTF-SPHLTLLNLLIYLIMTSSMFL---MLMNLN----------STNINKLSSSWSKNPTLTSMMM 245
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 221272275 400 IGTLSLCGIPPLACFWSK----DEILNDSLLfspIFAIIACSTAGLTAFYMFRI-YLLTFEGHLNT 460
Cdd:MTH00070 246 LTLLSLGGLPPTTGFIPKwlilQELTKQNLT---TLATLMALSALLSLFFYLRLsYAMSLTTSPNT 308
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
42-364 |
6.73e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 39.75 E-value: 6.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 42 FLSIFLLSIVMIFSLYLSIQQ-IFISCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGILVLIYSDNYMSHDQG 120
Cdd:MTH00163 6 FMLLFLIPLCFLKNSWWLVQSlLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVYKKNNY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 121 YLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPVAANACQKAFVTNRVGDFGLLLGILGLYWIT 200
Cdd:MTH00163 86 SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 201 GSFEFqdlfeIFNNLILNNRVNFFFFTLCGFLLfvgpiaKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVAR 279
Cdd:MTH00163 166 GSLSF-----FLLNFFGSLNFLWYLSMILAFLV------KMPMFFVHLWLPKAhVEAPVSGS-MILAGVLLKLGGYGLLR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221272275 280 LLPLFI-VIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYS-------------TMSQLGY-----MMLALGMGSyr 340
Cdd:MTH00163 234 VMSFFSkLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglmTFSYWGLmgsllMMIGHGLCS-- 311
|
330 340
....*....|....*....|....
gi 221272275 341 SALFHLITHAYSKallfLGSGSII 364
Cdd:MTH00163 312 SGLFCLANIIYER----LGSRSLL 331
|
|
| |
