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Conserved domains on  [gi|2441537249|pdb|7R4C|l]
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Chain l, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

Protein Classification

NDUF_B8 domain-containing protein( domain architecture ID 10530735)

NDUF_B8 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NDUF_B8 pfam05821
NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of ...
 21-186 5.44e-104

NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of several eukaryotic NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI) proteins. NADH:ubiquinone oxidoreductase (complex I) is an extremely complicated multiprotein complex located in the inner mitochondrial membrane. Its main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. Human complex I appears to consist of 41 subunits.


:

Pssm-ID: 428637  Cd Length: 167  Bit Score: 295.63  E-value: 5.44e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l         21 VVPLGARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGTGYGDYPKLPDRSQQERDPWYDWDHPDLRLN 100
Cdd:pfam05821   2 VVPRGARAASPLTKDMKPGPYPKTPEERAAAAKKYNMRPEDYQPYPDDGMGYGDYPDLPVRSQDERDPYYQWDHPDLRRN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l        101 WGEPMHWDLDMYIRNRVDTSPTPVNWNLMCKHLFGFVAFMLFMFWVGETYPAYQPVGPKQYPYNNLYLERGGDPNKEPEP 180
Cdd:pfam05821  82 WGEPVHWDMDMYIRNRVDTSPTPTTWNTMRKHLRVFVPMMLFMFYFGEEYPSYQPVGPKQYPYNDLYLERGGDPRKEPEP 161


                  ....*.
7R4C_l        181 VVHYEI 186
Cdd:pfam05821 162 VVNYEI 167
 
Name Accession Description Interval E-value
NDUF_B8 pfam05821
NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of ...
 21-186 5.44e-104

NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of several eukaryotic NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI) proteins. NADH:ubiquinone oxidoreductase (complex I) is an extremely complicated multiprotein complex located in the inner mitochondrial membrane. Its main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. Human complex I appears to consist of 41 subunits.


Pssm-ID: 428637  Cd Length: 167  Bit Score: 295.63  E-value: 5.44e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l         21 VVPLGARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGTGYGDYPKLPDRSQQERDPWYDWDHPDLRLN 100
Cdd:pfam05821   2 VVPRGARAASPLTKDMKPGPYPKTPEERAAAAKKYNMRPEDYQPYPDDGMGYGDYPDLPVRSQDERDPYYQWDHPDLRRN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l        101 WGEPMHWDLDMYIRNRVDTSPTPVNWNLMCKHLFGFVAFMLFMFWVGETYPAYQPVGPKQYPYNNLYLERGGDPNKEPEP 180
Cdd:pfam05821  82 WGEPVHWDMDMYIRNRVDTSPTPTTWNTMRKHLRVFVPMMLFMFYFGEEYPSYQPVGPKQYPYNDLYLERGGDPRKEPEP 161


                  ....*.
7R4C_l        181 VVHYEI 186
Cdd:pfam05821 162 VVNYEI 167
 
Name Accession Description Interval E-value
NDUF_B8 pfam05821
NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of ...
 21-186 5.44e-104

NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8); This family consists of several eukaryotic NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI) proteins. NADH:ubiquinone oxidoreductase (complex I) is an extremely complicated multiprotein complex located in the inner mitochondrial membrane. Its main function is the transport of electrons from NADH to ubiquinone, which is accompanied by translocation of protons from the mitochondrial matrix to the intermembrane space. Human complex I appears to consist of 41 subunits.


Pssm-ID: 428637  Cd Length: 167  Bit Score: 295.63  E-value: 5.44e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l         21 VVPLGARTASHITKDMLPGPYPKTPEERAAAAKKYNMRVEDYEPYPDDGTGYGDYPKLPDRSQQERDPWYDWDHPDLRLN 100
Cdd:pfam05821   2 VVPRGARAASPLTKDMKPGPYPKTPEERAAAAKKYNMRPEDYQPYPDDGMGYGDYPDLPVRSQDERDPYYQWDHPDLRRN 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
7R4C_l        101 WGEPMHWDLDMYIRNRVDTSPTPVNWNLMCKHLFGFVAFMLFMFWVGETYPAYQPVGPKQYPYNNLYLERGGDPNKEPEP 180
Cdd:pfam05821  82 WGEPVHWDMDMYIRNRVDTSPTPTTWNTMRKHLRVFVPMMLFMFYFGEEYPSYQPVGPKQYPYNDLYLERGGDPRKEPEP 161


                  ....*.
7R4C_l        181 VVHYEI 186
Cdd:pfam05821 162 VVNYEI 167
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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