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Conserved domains on  [gi|1033647863|pdb|5DN6|X]
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Chain X, ATP synthase subunit a,ATP synthase subunit a,ATP synthase subunit a,ATP synthase subunit a

Protein Classification

F0F1 ATP synthase subunit A( domain architecture ID 10001246)

F0F1 ATP synthase subunit A is part of the membrane proton channel of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane; it plays a direct role in the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 70-281 1.79e-61

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 193.37  E-value: 1.79e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       70 NATLWMALAALAITALLVFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKS 149
Cdd:COG0356   1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X      150 FSPTSHIAVTAVLAVLVFAGVTVLGFVKNGA--HFLGLFWVSSAPLAlrPVLAVIELISYFVRPVSHSIRLAGNIMAGHA 227
Cdd:COG0356  81 FPPTADINVTLALALIVFVLVHYYGIKKKGLggYLKHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
5DN6_X      228 VIKVFAAFAAVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDALHP 281
Cdd:COG0356 159 ILLLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVEE 212
 
Name Accession Description Interval E-value
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 70-281 1.79e-61

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 193.37  E-value: 1.79e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       70 NATLWMALAALAITALLVFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKS 149
Cdd:COG0356   1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X      150 FSPTSHIAVTAVLAVLVFAGVTVLGFVKNGA--HFLGLFWVSSAPLAlrPVLAVIELISYFVRPVSHSIRLAGNIMAGHA 227
Cdd:COG0356  81 FPPTADINVTLALALIVFVLVHYYGIKKKGLggYLKHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
5DN6_X      228 VIKVFAAFAAVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDALHP 281
Cdd:COG0356 159 ILLLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVEE 212
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 87-283 3.84e-56

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 180.38  E-value: 3.84e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        87 VFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPK-SFSPTSHIAVTAVLAVL 165
Cdd:PRK05815  33 LVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPYlLFPPTADINVTLALALI 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       166 VFAGVTVLGFVKNGA-HFLGLFWVSSAPLalrpvLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPV 244
Cdd:PRK05815 113 VFVLVIYYGIKKKGLgGYLKEFYLQPHPL-----LLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLAL 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
5DN6_X       245 SVVAIT-AMYGLEVLVCLIQAYVFTILTCVYLKDALHPAH 283
Cdd:PRK05815 188 APLILPvAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEEH 227
ATP-synt_A pfam00119
ATP synthase A chain;
91-276 1.11e-55

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 178.84  E-value: 1.11e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X         91 RGRAIVPNRVQSIAELLYGMVHKMVEDVTG-KDGLKYFPYVMTLFCFILFANFLGLLPKS---FSPTSHIAVTAVLAVLV 166
Cdd:pfam00119  21 KTKKLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIPKSpggFTVTADINVTLALALIV 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        167 FAGVTVLGFVKNGA--HFLGLFWvSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIK-----VFAAFAAVA 239
Cdd:pfam00119 101 FLLVHYYGIKKHGLggYFKKLFV-PPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLllaglIFALLSAGF 179

                         170       180       190
                  ....*....|....*....|....*....|....*..
5DN6_X        240 AIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLK 276
Cdd:pfam00119 180 LLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 95-279 2.37e-55

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.17  E-value: 2.37e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X         95 IVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLG 174
Cdd:TIGR01131  39 LIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISG 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        175 FVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAM-- 252
Cdd:TIGR01131 119 FRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILva 198

                         170       180
                  ....*....|....*....|....*...
5DN6_X        253 -YGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:TIGR01131 199 lIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 123-276 5.39e-51

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 164.49  E-value: 5.39e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X      123 GLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVI 202
Cdd:cd00310   1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
5DN6_X      203 ELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAI--TAMYGLEVLVCLIQAYVFTILTCVYLK 276
Cdd:cd00310  81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLlpVALTLLELFVAFIQAYVFTLLTAVYIS 156
 
Name Accession Description Interval E-value
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 70-281 1.79e-61

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 193.37  E-value: 1.79e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       70 NATLWMALAALAITALLVFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKS 149
Cdd:COG0356   1 DTVLMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGL 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X      150 FSPTSHIAVTAVLAVLVFAGVTVLGFVKNGA--HFLGLFWVSSAPLAlrPVLAVIELISYFVRPVSHSIRLAGNIMAGHA 227
Cdd:COG0356  81 FPPTADINVTLALALIVFVLVHYYGIKKKGLggYLKHLFFPPFPWLA--PLMLPIEIISELARPLSLSLRLFGNMFAGHI 158

                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....
5DN6_X      228 VIKVFAAFAAVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDALHP 281
Cdd:COG0356 159 ILLLLAGLAPFLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVEE 212
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 87-283 3.84e-56

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 180.38  E-value: 3.84e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        87 VFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPK-SFSPTSHIAVTAVLAVL 165
Cdd:PRK05815  33 LVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNLLGLIPYlLFPPTADINVTLALALI 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       166 VFAGVTVLGFVKNGA-HFLGLFWVSSAPLalrpvLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPV 244
Cdd:PRK05815 113 VFVLVIYYGIKKKGLgGYLKEFYLQPHPL-----LLPIEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLAL 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
5DN6_X       245 SVVAIT-AMYGLEVLVCLIQAYVFTILTCVYLKDALHPAH 283
Cdd:PRK05815 188 APLILPvAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEEH 227
ATP-synt_A pfam00119
ATP synthase A chain;
91-276 1.11e-55

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 178.84  E-value: 1.11e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X         91 RGRAIVPNRVQSIAELLYGMVHKMVEDVTG-KDGLKYFPYVMTLFCFILFANFLGLLPKS---FSPTSHIAVTAVLAVLV 166
Cdd:pfam00119  21 KTKKLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIPKSpggFTVTADINVTLALALIV 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        167 FAGVTVLGFVKNGA--HFLGLFWvSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIK-----VFAAFAAVA 239
Cdd:pfam00119 101 FLLVHYYGIKKHGLggYFKKLFV-PPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLLLllaglIFALLSAGF 179

                         170       180       190
                  ....*....|....*....|....*....|....*..
5DN6_X        240 AIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLK 276
Cdd:pfam00119 180 LLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 95-279 2.37e-55

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.17  E-value: 2.37e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X         95 IVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLG 174
Cdd:TIGR01131  39 LIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISG 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        175 FVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAM-- 252
Cdd:TIGR01131 119 FRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILva 198

                         170       180
                  ....*....|....*....|....*...
5DN6_X        253 -YGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:TIGR01131 199 lIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 123-276 5.39e-51

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 164.49  E-value: 5.39e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X      123 GLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVI 202
Cdd:cd00310   1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
5DN6_X      203 ELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAI--TAMYGLEVLVCLIQAYVFTILTCVYLK 276
Cdd:cd00310  81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLlpVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 91-280 1.31e-40

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 140.91  E-value: 1.31e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        91 RGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGV 170
Cdd:MTH00175  47 KGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAV 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       171 TVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGH---AVIKVFAAFAAVAAIAPVSVV 247
Cdd:MTH00175 127 TLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHllfAILSGFAFNMLSNGLIILSLF 206

                        170       180       190
                 ....*....|....*....|....*....|....*...
5DN6_X       248 AITAMYG---LEVLVCLIQAYVFTILTCVYLKD--ALH 280
Cdd:MTH00175 207 PMLIMIFitlLEMAVAVIQAYVFCLLTTIYLGDtiALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 50-279 1.04e-39

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 138.25  E-value: 1.04e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        50 DQFVIKPLFGegpvnwytPTNATLWMALAALAItallVFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPY 129
Cdd:MTH00172   7 DQFNIVWLIG--------LTNSSIMMILVIIVV----LLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPF 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       130 VMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFV 209
Cdd:MTH00172  75 IISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYIS 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
5DN6_X       210 RPVSHSIRLAGNIMAGHAVIK-----VFAAFAAVAAIAPVSVVAITAMYGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:MTH00172 155 RAISLGVRLAANLSAGHLLFAilagfGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTI 229
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 95-274 3.83e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 104.86  E-value: 3.83e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        95 IVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLG 174
Cdd:MTH00157  37 LIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFG 116

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       175 FVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAIT--AM 252
Cdd:MTH00157 117 WINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIqiLL 196

                        170       180
                 ....*....|....*....|..
5DN6_X       253 YGLEVLVCLIQAYVFTILTCVY 274
Cdd:MTH00157 197 LILESAVAIIQSYVFSVLSTLY 218
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 132-280 4.25e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 102.64  E-value: 4.25e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       132 TLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRP 211
Cdd:MTH00173  77 SLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRP 156

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
5DN6_X       212 VSHSIRLAGNIMAGHAVIK-----VFAAFAAVAAIAPVSVVAITAMYGL-EVLVCLIQAYVFTILTCVYLKDALH 280
Cdd:MTH00173 157 LTLTVRLLANISAGHIVLTlignyLSSSLFSSSVVSLLLVLLIQVGYFIfEVAVMLIQAYIFTLLIKLYSDEHPV 231
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 95-277 5.38e-25

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 99.34  E-value: 5.38e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        95 IVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLG 174
Cdd:MTH00176  40 FCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSG 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       175 FVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAMYG 254
Cdd:MTH00176 120 FINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQ 199

                        170       180
                 ....*....|....*....|....*...
5DN6_X       255 -----LEVLVCLIQAYVFTILTCVYLKD 277
Cdd:MTH00176 200 ilyfmFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 96-277 5.85e-25

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 99.26  E-value: 5.85e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        96 VPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGF 175
Cdd:MTH00101  38 INNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGF 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       176 ---VKNG-AHFLGlfwvSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAIT- 250
Cdd:MTH00101 118 rnkTKASlAHFLP----QGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITf 193

                        170       180       190
                 ....*....|....*....|....*....|.
5DN6_X       251 ----AMYGLEVLVCLIQAYVFTILTCVYLKD 277
Cdd:MTH00101 194 iiliLLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 94-279 2.50e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 98.47  E-value: 2.50e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        94 AIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVL 173
Cdd:MTH00174  58 TLVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       174 GFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGH------AVIKVFAAFAAVAAIAPVSVV 247
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHllfsiiASFAWKMINTGILIGSFVPFA 217

                        170       180       190
                 ....*....|....*....|....*....|..
5DN6_X       248 AITAMYGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:MTH00174 218 ILIFVTILEMAVAIIQAYVFTLLTIVYLRDTV 249
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 88-279 2.36e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 92.32  E-value: 2.36e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        88 FGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVF 167
Cdd:MTH00179  31 FPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNLGLALPLW 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       168 AGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVV 247
Cdd:MTH00179 111 LGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAVFVLMNFMGMVA 190

                        170       180       190
                 ....*....|....*....|....*....|....*..
5DN6_X       248 AIT-----AMYGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:MTH00179 191 LLTllvlfLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 95-281 3.93e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 91.72  E-value: 3.93e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        95 IVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLG 174
Cdd:MTH00005  42 ITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSS 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       175 FVKNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAV---IKVFAAFAAVAAIAPVSVVAITA 251
Cdd:MTH00005 122 VTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVlslIGIYAASALFSSISSTILLILTQ 201

                        170       180       190
                 ....*....|....*....|....*....|..
5DN6_X       252 M-YGL-EVLVCLIQAYVFTILTCVYLKDalHP 281
Cdd:MTH00005 202 MgYILfEVGICLIQAYIFCLLLSLYSDD--HP 231
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 97-275 8.26e-20

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 85.41  E-value: 8.26e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        97 PNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFV 176
Cdd:MTH00035  43 PSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFY 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       177 KNGAHFLGLFWVSSAPLALRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVI----KVFAAFAAVAAIAPVSVVAITAM 252
Cdd:MTH00035 123 LAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIfllsTAIWELSNSPLISIITLIIFFLL 202

                        170       180
                 ....*....|....*....|...
5DN6_X       253 YGLEVLVCLIQAYVFTILTCVYL 275
Cdd:MTH00035 203 FILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 123-275 3.56e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 83.77  E-value: 3.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       123 GLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVI 202
Cdd:MTH00132  66 GHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIII 145

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
5DN6_X       203 ELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAMY-----GLEVLVCLIQAYVFTILTCVYL 275
Cdd:MTH00132 146 ETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLlflltLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 121-275 5.88e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 83.34  E-value: 5.88e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       121 KDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLA 200
Cdd:MTH00120  64 KKGHKWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALI 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       201 VIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAMY-----GLEVLVCLIQAYVFTILTCVYL 275
Cdd:MTH00120 144 LIETISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIIlllltILELAVAMIQAYVFVLLLSLYL 223
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 56-279 1.03e-18

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 82.44  E-value: 1.03e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        56 PLFGEGPVNWYTPTNATlWMALAALAITALLVfgTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFC 135
Cdd:PRK13421  10 PLFSLGPVPISAPVVVT-WAIMAVLAAGSALA--TRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       136 FILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNG-AHFLGLFWVSSaplalrPVLAVIELISYFVRPVSH 214
Cdd:PRK13421  87 FVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGvRGYLATFAEPT------WVMIPLNLVEQLTRTFSL 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
5DN6_X       215 SIRLAGNIMAGHAVIkvfaafaAVAAIAPVSVVAITAMyGLEVLVCLIQAYVFTILTCVYLKDAL 279
Cdd:PRK13421 161 IVRLFGNVMSGVFVI-------GIVLSLAGLLVPIPLM-ALDLLTGAVQAYIFAVLAMVFIGAAV 217
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 123-277 5.98e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 80.40  E-value: 5.98e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       123 GLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVI 202
Cdd:MTH00073  66 GHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIII 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       203 ELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAMY-----GLEVLVCLIQAYVFTILTCVYLKD 277
Cdd:MTH00073 146 ETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVlflltLLEIAVAMIQAYVFVLLLSLYLQE 225
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 120-283 8.75e-16

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 76.32  E-value: 8.75e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       120 GKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNG-----AHFLGlfwvsSAPLA 194
Cdd:PRK13419 164 GHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGikgylAHLTG-----GTHWS 238

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       195 LRPVLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITAM----YGLEVLVCLIQAYVFTIL 270
Cdd:PRK13419 239 LWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFaifiYLLELFVAFLQAYIFTML 318

                        170
                 ....*....|....
5DN6_X       271 TCVYLKDAL-HPAH 283
Cdd:PRK13419 319 SALFIGLATaHEGH 332
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 90-275 2.36e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 73.24  E-value: 2.36e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        90 TRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPKSFSPTSHIAVTAVLAVLVFAG 169
Cdd:PRK13420  38 TRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFS 117

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       170 VTVLGFVKNG-AHFLGLFWVSSaplalrPVLAVIELISYFVRPVSHSIRLAGNIMAghavikvfAAFAAVAAIAPVSVVA 248
Cdd:PRK13420 118 VHWFGIRAEGlREYLKHYLSPS------PFLLPFHLISEITRTLALAVRLFGNIMS--------LELAALLVLLVAGFLV 183

                        170       180
                 ....*....|....*....|....*..
5DN6_X       249 ITAMYGLEVLVCLIQAYVFTILTCVYL 275
Cdd:PRK13420 184 PVPILMLHIIEALVQAYIFGMLALIYI 210
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 96-280 4.79e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 59.52  E-value: 4.79e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        96 VPNRVQSIAELLYGMVHK-MVEDVTGKDGLKYFPYVMTLFCFILFANFLGLLPK-------------------------- 148
Cdd:PRK13417 126 VQSRFANTVEVFVNFLRKdIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVPSvgeltvvasdygglvalgvmdhtpha 205

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       149 ---------SFSPTSHIAVTAVLAVLVFAGVTVLGFVKNGAHFLGLFWVSSAPLALRPVLAVIELI-SYFVRPVSHSIRL 218
Cdd:PRK13417 206 lptfakvwsGITVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRL 285

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
5DN6_X       219 AGNIMAGHAVIKVFAAFAAVAAIAPVSVVAITA---MYGLEVLVCLIQAYVFTILTCVYLKDALH 280
Cdd:PRK13417 286 LANMTAGHVIILALMGFIFQFQSWGIVPVSVIGsglIYVLEIFVAFLQAYIFVLLTSLFVGLSMH 350
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 110-276 4.05e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 54.98  E-value: 4.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       110 MVHKMVEDVTGKDGLKYFPYVMTLFCFILFaNFLGLLPKSFSPTSHIAVTAVLAVLVFAGVTVLGFVKNgaHFLGLFWVS 189
Cdd:MTH00087  36 GLLIIVFSYSNKLPLSSVISFFTFIVLLLF-CFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSK 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X       190 SAPLALRP-VLAVIELISYFVRPVSHSIRLAGNIMAGHAVIKVFAAFAAVAAIAPVSVVAitamygLEVLVCLIQAYVFT 268
Cdd:MTH00087 113 GSDSFLKTfSMLFVEIVSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSILAIM------MECFVAFIQSYIFS 186


                 ....*...
5DN6_X       269 ILTCVYLK 276
Cdd:MTH00087 187 RLIYLYLN 194
atpI CHL00046
ATP synthase CF0 A subunit
 87-224 2.89e-07

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 50.32  E-value: 2.89e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DN6_X        87 VFGTRGRAIVPNRVQSIAELLYGMVHKMVEDVTGKDG-LKYFPYVMTLFCFILFANFLG-LLPKSF---------SPTSH 155
Cdd:CHL00046  41 LLATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEyRPWVPFIGTMFLFIFVSNWSGaLLPWKLielphgelaAPTND 120

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
5DN6_X       156 IAVTAVLAVLVFAGVTVLGFVKNGahfLGLFWVSSAPLalrPVLAVIELISYFVRPVSHSIRLAGNIMA 224
Cdd:CHL00046 121 INTTVALALLTSVAYFYAGLSKKG---LGYFGKYIQPT---PILLPINILEDFTKPLSLSFRLFGNILA 183
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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