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Conserved domains on  [gi|196049795|pdb|3CYN|A]
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Chain A, Probable glutathione peroxidase 8

Protein Classification

glutathione peroxidase( domain architecture ID 10798236)

glutathione peroxidase catalyzes the reduction of hydroperoxides using GSH as a specific electron donor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
26-178 6.67e-111

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


:

Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.93  E-value: 6.67e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A        106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 178
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
 
Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
26-178 6.67e-111

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.93  E-value: 6.67e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A        106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 178
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
26-174 3.64e-72

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 214.69  E-value: 3.64e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTdRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:cd00340   1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEF 79
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A      106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI 174
Cdd:cd00340  80 CETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPgllgKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
26-177 2.13e-56

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 175.27  E-value: 2.13e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTdRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:COG0386   3 SIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAEF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A      106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK-----KEPRWNFWKYLVNPEGQVVKFWR----PEEPIevIRPDIAA 176
Cdd:COG0386  82 CSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPgllggGDIKWNFTKFLIDRDGNVVARFApttkPEDPE--LEAAIEK 159

                .
3CYN_A      177 L 177
Cdd:COG0386 160 L 160
PTZ00256 PTZ00256
glutathione peroxidase; Provisional
14-180 7.56e-47

glutathione peroxidase; Provisional


Pssm-ID: 173495 [Multi-domain]  Cd Length: 183  Bit Score: 151.84  E-value: 7.56e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        14 GTENLyfQSMINSFYAFEVKDAKGRTVSLEKYKG-KVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFG 92
Cdd:PTZ00256   9 GLEQI--QPPTKSFFEFEAIDIDGQLVQLSKFKGkKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        93 ESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFL------VDSSKKEPR---WNFWKYLVNPEGQVVKFWRP 163
Cdd:PTZ00256  87 EQEPWDEPEIKEYVQKKFNVDFPLFQKIEVNGENTHEIYKYLrrnselFQNNTNEARqipWNFAKFLIDGQGKVVKYFSP 166
                        170
                 ....*....|....*..
3CYN_A       164 EEPIEVIRPDIAALVRQ 180
Cdd:PTZ00256 167 KVNPNEMIQDIEKLLNA 183
GSHPx pfam00255
Glutathione peroxidase;
27-134 1.35e-38

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 128.24  E-value: 1.35e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         27 FYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDrNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFA 106
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTP-QYTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFC 79
                          90       100
                  ....*....|....*....|....*...
3CYN_A        107 RKNYGVTFPIFHKIKILGSEGEPAFRFL 134
Cdd:pfam00255  80 PGGYGVTFPLFSKIEVNGEKAHPVYKFL 107
 
Name Accession Description Interval E-value
gpx7 TIGR02540
putative glutathione peroxidase Gpx7; This model represents one of several families of known ...
26-178 6.67e-111

putative glutathione peroxidase Gpx7; This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.


Pssm-ID: 131592 [Multi-domain]  Cd Length: 153  Bit Score: 312.93  E-value: 6.67e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:TIGR02540   1 DFYSFEVKDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESF 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A        106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 178
Cdd:TIGR02540  81 ARRNYGVTFPMFSKIKILGSEAEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPVEEIRPEITALV 153
GSH_Peroxidase cd00340
Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a ...
26-174 3.64e-72

Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.


Pssm-ID: 238207 [Multi-domain]  Cd Length: 152  Bit Score: 214.69  E-value: 3.64e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTdRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:cd00340   1 SIYDFSVKDIDGEPVSLSKYKGKVLLIVNVASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEF 79
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A      106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK----KEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI 174
Cdd:cd00340  80 CETNYGVTFPMFAKIDVNGENAHPLYKYLKEEAPgllgKDIKWNFTKFLVDRDGEVVKRFAPTTDPEELEKDI 152
BtuE COG0386
Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid ...
26-177 2.13e-56

Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides [Defense mechanisms, Lipid transport and metabolism];


Pssm-ID: 440155 [Multi-domain]  Cd Length: 161  Bit Score: 175.27  E-value: 2.13e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTdRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:COG0386   3 SIYDFSVTTLDGEPVSLSDYKGKVLLIVNTASKCGFT-PQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIAEF 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A      106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSK-----KEPRWNFWKYLVNPEGQVVKFWR----PEEPIevIRPDIAA 176
Cdd:COG0386  82 CSLNYGVTFPMFAKIDVNGPNAHPLYKYLKEEAPgllggGDIKWNFTKFLIDRDGNVVARFApttkPEDPE--LEAAIEK 159

                .
3CYN_A      177 L 177
Cdd:COG0386 160 L 160
PTZ00256 PTZ00256
glutathione peroxidase; Provisional
14-180 7.56e-47

glutathione peroxidase; Provisional


Pssm-ID: 173495 [Multi-domain]  Cd Length: 183  Bit Score: 151.84  E-value: 7.56e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        14 GTENLyfQSMINSFYAFEVKDAKGRTVSLEKYKG-KVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFG 92
Cdd:PTZ00256   9 GLEQI--QPPTKSFFEFEAIDIDGQLVQLSKFKGkKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFM 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        93 ESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFL------VDSSKKEPR---WNFWKYLVNPEGQVVKFWRP 163
Cdd:PTZ00256  87 EQEPWDEPEIKEYVQKKFNVDFPLFQKIEVNGENTHEIYKYLrrnselFQNNTNEARqipWNFAKFLIDGQGKVVKYFSP 166
                        170
                 ....*....|....*..
3CYN_A       164 EEPIEVIRPDIAALVRQ 180
Cdd:PTZ00256 167 KVNPNEMIQDIEKLLNA 183
GSHPx pfam00255
Glutathione peroxidase;
27-134 1.35e-38

Glutathione peroxidase;


Pssm-ID: 395197  Cd Length: 108  Bit Score: 128.24  E-value: 1.35e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         27 FYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDrNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFA 106
Cdd:pfam00255   1 IYEFSAKDIDGEPVPFDQYRGKVVLIVNVASKCGLTP-QYTQLEELQERYKDRGLVILGFPCNQFGKQEPGSNEEIKYFC 79
                          90       100
                  ....*....|....*....|....*...
3CYN_A        107 RKNYGVTFPIFHKIKILGSEGEPAFRFL 134
Cdd:pfam00255  80 PGGYGVTFPLFSKIEVNGEKAHPVYKFL 107
btuE PRK10606
putative glutathione peroxidase; Provisional
23-169 5.00e-38

putative glutathione peroxidase; Provisional


Pssm-ID: 182585 [Multi-domain]  Cd Length: 183  Bit Score: 129.12  E-value: 5.00e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        23 MINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTdRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEV 102
Cdd:PRK10606   1 MQDSILTTVVTTIDGEVTTLEKYAGNVLLIVNVASKCGLT-PQYEQLENIQKAWADQGFVVLGFPCNQFLGQEPGSDEEI 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       103 ESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVD------------------SSKKEPR------WNFWKYLVNPEGQVV 158
Cdd:PRK10606  80 KTYCRTTWGVTFPMFSKIEVNGEGRHPLYQKLIAaaptavapeesgfyarmvSKGRAPLypddilWNFEKFLVGRDGQVI 159
                        170
                 ....*....|....*
3CYN_A       159 KFWR----PEEPIEV 169
Cdd:PRK10606 160 QRFSpdmtPEDPIVM 174
PLN02412 PLN02412
probable glutathione peroxidase
26-180 1.22e-37

probable glutathione peroxidase


Pssm-ID: 166053 [Multi-domain]  Cd Length: 167  Bit Score: 127.80  E-value: 1.22e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:PLN02412   8 SIYDFTVKDIGGNDVSLNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQFLGQEPGSNEEIQQT 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLvdSSKK------EPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 179
Cdd:PLN02412  88 VCTRFKAEFPIFDKVDVNGKNTAPLYKYL--KAEKgglfgdAIKWNFTKFLVSKEGKVVQRYAPTTSPLKIEKDIQNLLG 165

                 .
3CYN_A       180 Q 180
Cdd:PLN02412 166 Q 166
PLN02399 PLN02399
phospholipid hydroperoxide glutathione peroxidase
26-177 1.78e-35

phospholipid hydroperoxide glutathione peroxidase


Pssm-ID: 178021 [Multi-domain]  Cd Length: 236  Bit Score: 124.24  E-value: 1.78e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        26 SFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESF 105
Cdd:PLN02399  78 SVHDFTVKDIDGKDVALSKFKGKVLLIVNVASKCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQF 157
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
3CYN_A       106 ARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSS----KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAAL 177
Cdd:PLN02399 158 ACTRFKAEFPIFDKVDVNGPSTAPVYQFLKSNAggflGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKL 233
PTZ00056 PTZ00056
glutathione peroxidase; Provisional
21-178 1.96e-29

glutathione peroxidase; Provisional


Pssm-ID: 240248 [Multi-domain]  Cd Length: 199  Bit Score: 107.63  E-value: 1.96e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A        21 QSMINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSK 100
Cdd:PTZ00056  13 DELRKSIYDYTVKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTK 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       101 EVESFARKNyGVTFPIFHKIKILGSEGEPAFRFLV---------DSSKKEPRWNFWKYLVNPEGQVVKFWRPE-EPIEVI 170
Cdd:PTZ00056  93 DIRKFNDKN-KIKYNFFEPIEVNGENTHELFKFLKancdsmhdeNGTLKAIGWNFGKFLVNKSGNVVAYFSPRtEPLELE 171

                 ....*...
3CYN_A       171 rPDIAALV 178
Cdd:PTZ00056 172 -KKIAELL 178
Bcp COG1225
Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];
29-177 8.53e-09

Peroxiredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440838 [Multi-domain]  Cd Length: 136  Bit Score: 51.79  E-value: 8.53e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       29 AFEVKDAKGRTVSLEKYKGKVSLVVNVASDC-----QLTDrnylgLKELHKEFGPSHFSVLAFpcnqfgeSePRPSKEVE 103
Cdd:COG1225   3 DFTLPDLDGKTVSLSDLRGKPVVLYFYATWCpgctaELPE-----LRDLYEEFKDKGVEVLGV-------S-SDSDEAHK 69
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A      104 SFARKnYGVTFPIF----HKI-KILGSEGEPAFrflvdsskkeprwnfwkYLVNPEGQVVKFWR-----PEEPIEVIRPD 173
Cdd:COG1225  70 KFAEK-YGLPFPLLsdpdGEVaKAYGVRGTPTT-----------------FLIDPDGKIRYVWVgpvdpRPHLEEVLEAL 131

                ....
3CYN_A      174 IAAL 177
Cdd:COG1225 132 LAEL 135
TlpA_like_family cd02966
TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are ...
29-160 1.84e-07

TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.


Pssm-ID: 239264 [Multi-domain]  Cd Length: 116  Bit Score: 47.62  E-value: 1.84e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       29 AFEVKDAKGRTVSLEKYKGKVsLVVNV-ASDC-----QLTDrnylgLKELHKEFGPSHFSVLAFpcNqFGESEPrpsKEV 102
Cdd:cd02966   1 DFSLPDLDGKPVSLSDLKGKV-VLVNFwASWCppcraEMPE-----LEALAKEYKDDGVEVVGV--N-VDDDDP---AAV 68
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|...
3CYN_A      103 ESFARKnYGVTFPIF----HKI-KILGSEGEPAFrflvdsskkeprwnfwkYLVNPEGQVVKF 160
Cdd:cd02966  69 KAFLKK-YGITFPVLldpdGELaKAYGVRGLPTT-----------------FLIDRDGRIRAR 113
AhpC-TSA pfam00578
AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) ...
30-136 1.36e-05

AhpC/TSA family; This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).


Pssm-ID: 425763 [Multi-domain]  Cd Length: 124  Bit Score: 42.60  E-value: 1.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A         30 FEVKDAKGRTVSLEKYKGKVSLVVNVASD-CQLTDRNYLGLKELHKEFGPSHFSVLAFPCNqfgeseprPSKEVESFARK 108
Cdd:pfam00578   8 FELPDGDGGTVSLSDYRGKWVVLFFYPADwTPVCTTELPALADLYEEFKKLGVEVLGVSVD--------SPESHKAFAEK 79
                          90       100       110
                  ....*....|....*....|....*....|....*...
3CYN_A        109 nYGVTFPIFH--------KIKILGSEGEPAFR--FLVD 136
Cdd:pfam00578  80 -YGLPFPLLSdpdgevarAYGVLNEEEGGALRatFVID 116
TrxA COG0526
Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, ...
26-180 1.84e-05

Thiol-disulfide isomerase or thioredoxin [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440292 [Multi-domain]  Cd Length: 139  Bit Score: 42.75  E-value: 1.84e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       26 SFYAFEVKDAKGRTVSLEKYKGKVsLVVNV-AS---DCQLTDRNylgLKELHKEFGPshFSVLAFPCNQFGEseprpskE 101
Cdd:COG0526   7 PAPDFTLTDLDGKPLSLADLKGKP-VLVNFwATwcpPCRAEMPV---LKELAEEYGG--VVFVGVDVDENPE-------A 73
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
3CYN_A      102 VESFARKnYGVTFPIfhkikILGSEGEPAFRFLVDSSkkePRWnfwkYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQ 180
Cdd:COG0526  74 VKAFLKE-LGLPYPV-----LLDPDGELAKAYGVRGI---PTT----VLIDKDGKIVARHVGPLSPEELEEALEKLLAK 139
Sco1 COG1999
Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family [Posttranslational modification, ...
31-179 3.22e-04

Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441602  Cd Length: 156  Bit Score: 39.50  E-value: 3.22e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       31 EVKDAKGRTVSLEKYKGKVSLVVNVASDCQ-----LTDRnylgLKELHKEFGP---SHFSVLAF---PCN-------QFG 92
Cdd:COG1999   4 TLTDQDGKPVTLADLRGKPVLVFFGYTSCPdvcptTLAN----LAQVQEALGEdggDDVQVLFIsvdPERdtpevlkAYA 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3CYN_A       93 ESEPRPS--------KEVESFARKnYGVTFpifhkikilgsEGEPAFRFLVDSSKkeprwNFwkYLVNPEGQVVKFWRPE 164
Cdd:COG1999  80 EAFGAPRwigltgdpEEIAALAKA-FGVYY-----------EKVPDGDYTFDHSA-----AV--YLVDPDGRLRGYYPAG 140
                       170
                ....*....|....*
3CYN_A      165 EPIEVIRPDIAALVR 179
Cdd:COG1999 141 EDPEELAADLKALLE 155
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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