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Conserved domains on  [gi|122920845|pdb|2J8K|A]
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Chain A, Np275-np276

Protein Classification

pentapeptide repeat-containing protein( domain architecture ID 11442852)

pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function

CATH:  2.160.20.10
PubMed:  33925937|9655353

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-196 3.16e-37

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 127.36  E-value: 3.16e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       36 DFSIVDLRGAVLENINLSGAILHGAmLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEA 115
Cdd:COG1357   6 DLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGA 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A      116 ---VLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTIL 192
Cdd:COG1357  85 nlaNLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANL 164


                ....
2J8K_A      193 EGGN 196
Cdd:COG1357 165 SGAN 168
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-196 3.16e-37

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 127.36  E-value: 3.16e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       36 DFSIVDLRGAVLENINLSGAILHGAmLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEA 115
Cdd:COG1357   6 DLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGA 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A      116 ---VLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTIL 192
Cdd:COG1357  85 nlaNLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANL 164


                ....
2J8K_A      193 EGGN 196
Cdd:COG1357 165 SGAN 168
PRK15196 PRK15196
type III secretion system effector PipB2;
50-196 8.76e-26

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 101.62  E-value: 8.76e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        50 INLSGAILHGAMLDEANLQQANLSRADLSGATL-----NGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKA 124
Cdd:PRK15196 152 MNLKGAVLTGANLTAENLCDADLSGANLEGAVLfmadcEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTG 231

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       125 ANLEQAIL----------SHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEG 194
Cdd:PRK15196 232 ANLQHASLlgcsmiecncSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAE 311


                 ..
2J8K_A       195 GN 196
Cdd:PRK15196 312 AN 313
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 70-109 4.03e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 50.42  E-value: 4.03e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A         70 ANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEG 109
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-196 3.16e-37

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 127.36  E-value: 3.16e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       36 DFSIVDLRGAVLENINLSGAILHGAmLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEA 115
Cdd:COG1357   6 DLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGA 84

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A      116 ---VLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTIL 192
Cdd:COG1357  85 nlaNLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANL 164


                ....
2J8K_A      193 EGGN 196
Cdd:COG1357 165 SGAN 168
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-187 8.36e-37

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 126.21  E-value: 8.36e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       36 DFSIVDLRGA----VLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILdnAILEGAI 111
Cdd:COG1357  16 DLSGADLSGAnlsgALSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANL--ANLSGAN 93

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
2J8K_A      112 LDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANL 187
Cdd:COG1357  94 LSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANL 169
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
36-158 7.94e-30

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 108.49  E-value: 7.94e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       36 DFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADL---SGATLNGADLRGANLSKADLSDAILDNAILEGAIL 112
Cdd:COG1357  45 NLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLanlSGANLSGANLSGANLRGANLSGANLSGADLSGADL 124

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
2J8K_A      113 DEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLA 158
Cdd:COG1357 125 SGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSGANLA 170
PRK15196 PRK15196
type III secretion system effector PipB2;
50-196 8.76e-26

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 101.62  E-value: 8.76e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        50 INLSGAILHGAMLDEANLQQANLSRADLSGATL-----NGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKA 124
Cdd:PRK15196 152 MNLKGAVLTGANLTAENLCDADLSGANLEGAVLfmadcEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTG 231

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       125 ANLEQAIL----------SHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEG 194
Cdd:PRK15196 232 ANLQHASLlgcsmiecncSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAE 311


                 ..
2J8K_A       195 GN 196
Cdd:PRK15196 312 AN 313
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
35-133 6.89e-20

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 82.30  E-value: 6.89e-20
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       35 RDFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDE 114
Cdd:COG1357  82 SGANLANLSGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSG 161

                        90
                ....*....|....*....
2J8K_A      115 AVLNQANLkaANLEQAILS 133
Cdd:COG1357 162 ANLSGANL--ANLEGADLK 178
PRK15196 PRK15196
type III secretion system effector PipB2;
36-187 4.97e-19

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 83.52  E-value: 4.97e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        36 DFSIVDLRGAVL-----ENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADL----------SDA 100
Cdd:PRK15196 173 DLSGANLEGAVLfmadcEGANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLlgcsmiecncSGA 252

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       101 ILDNAILEGAIL-----DEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSgadlaiadlhQANLHQAALERA 175
Cdd:PRK15196 253 NMDHTNLSGATLiradmSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLA----------EANLNNTCFKDC 322

                        170
                 ....*....|..
2J8K_A       176 NLTGANLEDANL 187
Cdd:PRK15196 323 TLTHLRTEDATM 334
PRK15197 PRK15197
type III secretion system effector PipB;
71-185 2.96e-18

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 80.36  E-value: 2.96e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        71 NLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAA 150
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAA 234

                         90       100       110
                 ....*....|....*....|....*....|....*.
2J8K_A       151 DLSGADLAIADLHQANLHQAALERA-NLTGANLEDA 185
Cdd:PRK15197 235 ILFGSDLTDTKLNGAKLDKIALTLAkALTGADLTGS 270
PRK15196 PRK15196
type III secretion system effector PipB2;
64-201 4.31e-16

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 75.04  E-value: 4.31e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        64 EANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLS 143
Cdd:PRK15196 136 EFSLPQDSVILTAQGGMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLE 215

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
2J8K_A       144 EANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEGGNNNLAT 201
Cdd:PRK15196 216 DSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGAT 273
PRK15196 PRK15196
type III secretion system effector PipB2;
44-153 3.90e-14

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 69.65  E-value: 3.90e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        44 GAVLENINLSGAILH-----GAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLN 118
Cdd:PRK15196 221 GATLDHANLTGANLQhasllGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFI 300

                         90       100       110
                 ....*....|....*....|....*....|....*
2J8K_A       119 QANLKAANLEQAILSHANIREADLSEANLEAADLS 153
Cdd:PRK15196 301 STNLDGADLAEANLNNTCFKDCTLTHLRTEDATMS 335
PRK15197 PRK15197
type III secretion system effector PipB;
36-155 6.76e-13

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 65.72  E-value: 6.76e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        36 DFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEA 115
Cdd:PRK15197 160 NLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGS 239

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
2J8K_A       116 VLNQANLKAANLEQAILSHANireadlseaNLEAADLSGA 155
Cdd:PRK15197 240 DLTDTKLNGAKLDKIALTLAK---------ALTGADLTGS 270
PRK15197 PRK15197
type III secretion system effector PipB;
76-193 2.44e-10

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 58.40  E-value: 2.44e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        76 DLSGATLNGADLRGANLSKADLSDAildnailegaildeavlnqaNLKAANLEQAILSHANIREADLSEANLEAADLSGA 155
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSDIDASNA--------------------DFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKA 214

                         90       100       110
                 ....*....|....*....|....*....|....*...
2J8K_A       156 DLAIADLHQANLHQAALERANLTGANLEDANLEGTILE 193
Cdd:PRK15197 215 NLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLD 252
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 70-109 4.03e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 50.42  E-value: 4.03e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A         70 ANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEG 109
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 65-104 2.13e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.49  E-value: 2.13e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A         65 ANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDN 104
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 62-99 3.67e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 47.72  E-value: 3.67e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
2J8K_A         62 LDEANLQQANLSRADLSGATLNGADLRGANLSKADLSD 99
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
100-177 4.64e-08

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 48.42  E-value: 4.64e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
2J8K_A        100 AILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANL 177
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
PRK15197 PRK15197
type III secretion system effector PipB;
117-194 5.13e-08

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 51.85  E-value: 5.13e-08
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
2J8K_A       117 LNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEG 194
Cdd:PRK15197 156 LRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTA 233
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 55-93 2.17e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.79  E-value: 2.17e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A         55 AILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLS 93
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 51-89 2.66e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.41  E-value: 2.66e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A         51 NLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRG 89
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 140-179 2.95e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.41  E-value: 2.95e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A        140 ADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTG 179
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 120-157 4.05e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 45.02  E-value: 4.05e-07
                          10        20        30
                  ....*....|....*....|....*....|....*...
2J8K_A        120 ANLKAANLEQAILSHANIREADLSEANLEAADLSGADL 157
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
24-146 5.04e-07

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 49.29  E-value: 5.04e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        24 EKLRQLYAAGeRDFSIVDLRGAVLENINLSGAILH-GAMLDEANLQQANLSRADLSGATLNGADLRGANLS-----KADL 97
Cdd:PRK15377 185 EAGEELTYAD-RDFSNADFRNINFSKINPSGFMLRdGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSdvvcsNTKF 263

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
2J8K_A        98 SDAILDNAILEGAILDE--AVLNQANLKAANL-EQAILSHANIREADLSEAN 146
Cdd:PRK15377 264 SNSDMNEASLKYSITTQqqPSFIETTLKNTIIiHKANLSGVILNEPDNSSPP 315
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 41-79 6.62e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 44.25  E-value: 6.62e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A         41 DLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSG 79
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 75-112 9.18e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 43.87  E-value: 9.18e-07
                          10        20        30
                  ....*....|....*....|....*....|....*...
2J8K_A         75 ADLSGATLNGADLRGANLSKADLSDAILDNAILEGAIL 112
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
89-157 9.78e-07

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 44.96  E-value: 9.78e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
2J8K_A         89 GANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSGADL 157
Cdd:pfam13599  10 GCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
36-100 1.30e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 44.57  E-value: 1.30e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
2J8K_A         36 DFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDA 100
Cdd:pfam13599  12 KLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
PRK15196 PRK15196
type III secretion system effector PipB2;
41-118 1.58e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 47.31  E-value: 1.58e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
2J8K_A        41 DLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLN 118
Cdd:PRK15196 258 NLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTHLRTEDATMS 335
PRK15196 PRK15196
type III secretion system effector PipB2;
41-125 2.10e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 46.92  E-value: 2.10e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        41 DLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGA-----NLSKADLSDAILDNAILEGAILDEA 115
Cdd:PRK15196 248 NCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKAsfistNLDGADLAEANLNNTCFKDCTLTHL 327

                         90
                 ....*....|
2J8K_A       116 VLNQANLKAA 125
Cdd:PRK15196 328 RTEDATMSTS 337
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 90-129 3.12e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 42.33  E-value: 3.12e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A         90 ANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQ 129
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 150-189 3.63e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 42.33  E-value: 3.63e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A        150 ADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEG 189
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
75-152 4.22e-06

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 43.03  E-value: 4.22e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
2J8K_A         75 ADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIREADLSEANLEAADL 152
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 115-154 4.27e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.94  E-value: 4.27e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A        115 AVLNQANLKAANLEQAILSHANIREADLSEANLEAADLSG 154
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15197 PRK15197
type III secretion system effector PipB;
121-201 7.77e-06

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 45.31  E-value: 7.77e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A       121 NLKAANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTILEGGNNNLA 200
Cdd:PRK15197 155 NLRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAA 234


                 .
2J8K_A       201 T 201
Cdd:PRK15197 235 I 235
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 82-119 9.42e-06

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.17  E-value: 9.42e-06
                          10        20        30
                  ....*....|....*....|....*....|....*...
2J8K_A         82 LNGADLRGANLSKADLSDAILDNAILEGAILDEAVLNQ 119
Cdd:pfam00805   3 LSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 130-169 1.02e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 41.17  E-value: 1.02e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A        130 AILSHANIREADLSEANLEAADLSGADLAIADLHQANLHQ 169
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 110-148 1.46e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.79  E-value: 1.46e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A        110 AILDEAVLNQANLKAANLEQAILSHANIREADLSEANLE 148
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 45-84 1.76e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 40.40  E-value: 1.76e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A         45 AVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNG 84
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 160-196 3.23e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 39.63  E-value: 3.23e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
2J8K_A        160 ADLHQANLHQAALERANLTGANLEDANLEGTILEGGN 196
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGAN 37
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 85-123 5.69e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.86  E-value: 5.69e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A         85 ADLRGANLSKADLSDAILDNAILEGAILDEAVLNQANLK 123
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
52-142 6.38e-05

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.95  E-value: 6.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A         52 LSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNailegaildeavlnqANLKAANLEQAI 131
Cdd:pfam13599   3 FTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKN---------------AQFSGCNLKNSN 67

                          90
                  ....*....|.
2J8K_A        132 LSHANIREADL 142
Cdd:pfam13599  68 FSDVKLKGADF 78
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 125-164 7.85e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.48  E-value: 7.85e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
2J8K_A        125 ANLEQAILSHANIREADLSEANLEAADLSGADLAIADLHQ 164
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 36-74 8.95e-05

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 38.48  E-value: 8.95e-05
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A         36 DFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSR 74
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
36-110 1.05e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 39.18  E-value: 1.05e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
2J8K_A         36 DFSIVDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGA 110
Cdd:pfam13599   2 DFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
PRK15377 PRK15377
type III secretion system effector HECT-type E3 ubiquitin transferase;
45-191 1.24e-04

type III secretion system effector HECT-type E3 ubiquitin transferase;


Pssm-ID: 185275 [Multi-domain]  Cd Length: 782  Bit Score: 41.98  E-value: 1.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2J8K_A        45 AVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILegaildeavlnqanlka 124
Cdd:PRK15377 160 SLQATSSPSSPADWAKKLTDARLRQEAGEELTYADRDFSNADFRNINFSKINPSGFMLRDGDI----------------- 222

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
2J8K_A       125 anleqailshanIREADLSEANLEAADLSGADLAIADLHQANLHQAALERANLTGANLEDANLEGTI 191
Cdd:PRK15377 223 ------------IKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEASLKYSI 277
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 100-138 3.47e-04

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 36.93  E-value: 3.47e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
2J8K_A        100 AILDNAILEGAILDEAVLNQANLKAANLEQAILSHANIR 138
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLS 39
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
40-115 6.01e-04

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 37.25  E-value: 6.01e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
2J8K_A         40 VDLRGAVLENINLSGAILHGAMLDEANLQQANLSRADLSGATLNGADLRGANLSKADLSDAILDNAILEGAILDEA 115
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNFSDVKLKGA 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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