|
Name |
Accession |
Description |
Interval |
E-value |
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
11-494 |
1.72e-155 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 450.08 E-value: 1.72e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 11 RQPPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFseevLQEWNWTERY 90
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNRYPGLRLDTPSHLYSLPF----FPNWSDDPDF 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGN 170
Cdd:COG2072 77 PTGDEILAYLEAYADKFGLRRPIRFGTEVTSARWDEADGRWTVTTDDGETLTARFVVVATGPLSRPKIPDIPGLEDFAGE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 171 LYHTGNWPHePVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNapldpefladlkkrYAEFREESR 250
Cdd:COG2072 157 QLHSADWRN-PVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRPN--------------YDPERGRPA 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 251 NTPGGTHRYqgpksalevsdeelvetlerywqeggpdilaayrdilrdRDANERVAEFIRNKIRNTVRDPEVaERLVPKg 330
Cdd:COG2072 222 NYLGLEAPP---------------------------------------ALNRRDARAWLRRLLRAQVKDPEL-GLLTPD- 260
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 331 YPFGTKRLILEIDYYEMFNRDNVHLVDTlsaPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFKIDIRGVGNVal 409
Cdd:COG2072 261 YPPGCKRPLLSTDYYEALRRGNVELVTG---GIERITEDGVVFADgTEHEVDVIVWATGFRADLPWLAPLDVRGRDGR-- 335
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 410 kekwaAGPRTYLGLSTAGFPNLFFIaGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEI 489
Cdd:COG2072 336 -----SGPRAYLGVVVPGFPNLFFL-GPNSPSGHSSLTLGAERQARYIARLIAHMRRRGAAAIEVRPEAEDAFNARLQRR 409
|
....*
1W4X_A 490 ADETL 494
Cdd:COG2072 410 AARTV 414
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
18-221 |
3.69e-16 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 79.39 E-value: 3.69e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYA-LYrLRELGRSVHVIEtAGDVGG-VWYWNR---YPGarcdiesieycysFSEEVlqewnwteryaS 92
Cdd:COG0492 2 DVVIIGAGPAGLTAaIY-AARAGLKTLVIE-GGEPGGqLATTKEienYPG-------------FPEGI-----------S 55
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 93 QPEILRyiNFV--ADKFdlrsGITFHTT-VTAAAFDEatNTWTVDTNHGDRIRARYLIMASGqlSVPQLPNFPGLKDFAG 169
Cdd:COG0492 56 GPELAE--RLReqAERF----GAEILLEeVTSVDKDD--GPFRVTTDDGTEYEAKAVIIATG--AGPRKLGLPGEEEFEG 125
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
1W4X_A 170 -NLYHTGnwPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221
Cdd:COG0492 126 rGVSYCA--TCDGFFFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHRRDEL 176
|
|
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
19-218 |
3.96e-16 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 81.36 E-value: 3.96e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 19 VLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYP-GARCDI-------ESIEY-CYS---FSEEVlqewnw 86
Cdd:pfam00743 4 VAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVeEGRASIyksvitnTSKEMsCFSdfpFPEDY------ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 87 tERYASQPEILRYINFVADKFDLRSGITFHTTVTAAA----FDEaTNTWTVDTNH-GDRIRARY--LIMASGQLSVPQLP 159
Cdd:pfam00743 78 -PNFMHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKkrpdFST-SGQWEVVTEHeGKQESAVFdaVMVCTGHHTNPHLP 155
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
1W4X_A 160 --NFPGLKDFAGNLYHTGNWPHePVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRT 218
Cdd:pfam00743 156 leSFPGIEKFKGQYFHSRDYKH-PEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRR 215
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
75-219 |
2.55e-12 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 67.63 E-value: 2.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 75 SFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRsgITFHTTVTAAAFDEatNTWTVDTNHGDrIRARYLIMASGQLS 154
Cdd:pfam13738 56 AISPGTSPAFTFNREHPSGNEYAEYLRRVADHFELP--INLFEEVTSVKKED--DGFVVTTSKGT-YQARYVIIATGEFD 130
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
1W4X_A 155 VPQLPNFPGLKDfagnLYHTGNWPHepvDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219
Cdd:pfam13738 131 FPNKLGVPELPK----HYSYVKDFH---PYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGS 188
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
11-217 |
2.71e-12 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 68.73 E-value: 2.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 11 RQPPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW-------------NR-------YPGARCDI--E 68
Cdd:PLN02172 5 QNPINSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYtpksesdplsldpTRsivhssvYESLRTNLprE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 69 SIEYC-YSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAafDEATNTWTVDTNHGDRIRARYL- 146
Cdd:PLN02172 85 CMGYRdFPFVPRFDDESRDSRRYPSHREVLAYLQDFAREFKIEEMVRFETEVVRV--EPVDGKWRVQSKNSGGFSKDEIf 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
1W4X_A 147 ---IMASGQLSVPQLPNFPGLKDFAGNLYHTGNWpHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQR 217
Cdd:PLN02172 163 davVVCNGHYTEPNVAHIPGIKSWPGKQIHSHNY-RVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASR 235
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
18-272 |
1.14e-11 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 65.80 E-value: 1.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVggvwywnryPGARCdIESIEY-CYSFSEEVLQEWnwteryasqPEI 96
Cdd:pfam07992 2 DVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGTC---------PYGGC-VLSKALlGAAEAPEIASLW---------ADL 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 97 LRYINFVADKfdLRSGITFHTTVTAAAFDEATNTWTV---DTNHGDRIRARYLIMASGqlSVPQLPNFPGLKDFAG---- 169
Cdd:pfam07992 63 YKRKEEVVKK--LNNGIEVLLGTEVVSIDPGAKKVVLeelVDGDGETITYDRLVIATG--ARPRLPPIPGVELNVGflvr 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 170 NLYHTGNWPHEPVDfsgQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAvPARNAPLDPEFLADLKKRYAEFREES 249
Cdd:pfam07992 139 TLDSAEALRLKLLP---KRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLL-RAFDEEISAALEKALEKNGVEVRLGT 214
|
250 260
....*....|....*....|...
1W4X_A 250 RNTpggthRYQGPKSALEVSDEE 272
Cdd:pfam07992 215 SVK-----EIIGDGDGVEVILKD 232
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
21-66 |
3.91e-10 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 55.62 E-value: 3.91e-10
10 20 30 40
....*....|....*....|....*....|....*....|....*.
1W4X_A 21 VVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCD 66
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVFD 46
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
14-151 |
1.42e-08 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 56.48 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG-------------------GVwyWNRYPGARCDIESIEYCY 74
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRpdgrgialsprslellrrlGL--WDRLLARGAPIRGIRVRD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 75 SFSEEVLQEWNWTERYA------SQPEILRyinFVADKFDlRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIM 148
Cdd:COG0654 79 GSDGRVLARFDAAETGLpaglvvPRADLER---ALLEAAR-ALGVELRFGTEVTGLEQDADGVTVTLADGRTLRADLVVG 154
|
...
1W4X_A 149 ASG 151
Cdd:COG0654 155 ADG 157
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
9-53 |
7.53e-08 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 54.93 E-value: 7.53e-08
10 20 30 40
....*....|....*....|....*....|....*....|....*.
1W4X_A 9 SRRqpPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIEtAGD-VGG 53
Cdd:COG1231 2 SRR--ARGKDVVIVGAGLAGLAAARELRKAGLDVTVLE-ARDrVGG 44
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
17-53 |
1.35e-06 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 50.99 E-value: 1.35e-06
10 20 30
....*....|....*....|....*....|....*..
1W4X_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGG 38
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
18-199 |
1.44e-06 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 50.72 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVG-GVWYWNRYPGARCDIESIEycYS-FSEEV--LQEWNWTERY 90
Cdd:COG4529 7 RIAIIGGGASGTALAIHLLRRAPeplRITLFEPRPELGrGVAYSTDSPEHLLNVPAGR--MSaFPDDPdhFLRWLRENGA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 91 ASQPEIL-----------RYinfVADKFD-----LRSGITF-HTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153
Cdd:COG4529 85 RAAPAIDpdafvprrlfgEY---LRERLAealarAPAGVRLrHIRAEVVDLERDDGGYRVTLADGETLRADAVVLATGHP 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
1W4X_A 154 SvpqlPNFPGLKDFAGNLYHTGNWPHEPVDF--SGQRVGVIGTGSSGI 199
Cdd:COG4529 162 P----PAPPPGLAAGSPRYIADPWPPGALARipPDARVLIIGTGLTAI 205
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
109-241 |
1.65e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 47.11 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 109 LRSGITFHTTVTAAAFDEATNTwtVDTNHGDRIRARYLIMASGqlSVPQLPNFPGLKdfAGNLYHTGNWPHEP------V 182
Cdd:COG0446 47 ERKGIDVRTGTEVTAIDPEAKT--VTLRDGETLSYDKLVLATG--ARPRPPPIPGLD--LPGVFTLRTLDDADalrealK 120
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
1W4X_A 183 DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAvparnAPLDPEFLADLKKR 241
Cdd:COG0446 121 EFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRLL-----GVLDPEMAALLEEE 174
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
15-53 |
2.09e-05 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 46.82 E-value: 2.09e-05
10 20 30
....*....|....*....|....*....|....*....
1W4X_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIEtAGDVGG 53
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLE-RGRPGS 38
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
15-195 |
6.15e-05 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 45.46 E-value: 6.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIEtAGDVGGVwywnrypgarC----DIESIEYCYsfSEEVLQEWNWTERY 90
Cdd:COG1249 2 KDYDLVVIGAGPGGYVAAIRAAQLGLKVALVE-KGRLGGT----------ClnvgCIPSKALLH--AAEVAHEARHAAEF 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 91 ---ASQPEI-----LRYINFVADKfdLRSGITFH------TTVTAAA-FdeaTNTWTVDTNHGDRIRARYLIMASGqlSV 155
Cdd:COG1249 69 gisAGAPSVdwaalMARKDKVVDR--LRGGVEELlkkngvDVIRGRArF---VDPHTVEVTGGETLTADHIVIATG--SR 141
|
170 180 190 200
....*....|....*....|....*....|....*....|....
1W4X_A 156 PQLPNFPGLkdfAGNLYHTG----NWPHEPvdfsgQRVGVIGTG 195
Cdd:COG1249 142 PRVPPIPGL---DEVRVLTSdealELEELP-----KSLVVIGGG 177
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
18-149 |
6.17e-05 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 45.25 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGvwywnR-----YPGARCDiesieY--CYsFS------EEVLQEW 84
Cdd:COG3380 5 DIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGG-----RmatrrLDGGRFD-----HgaQY-FTardprfQALVEEW 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 85 -------NWT----------ERYASQPEILRYI-----NFVADkfDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDR-I 141
Cdd:COG3380 74 laaglvaPWTfdfvvldadgLVSPRDDGEPRYVgvpgmNALAK--HLAAGLDVRLGTRVTALERDGDGWRLTDEDGEEyG 151
|
....*...
1W4X_A 142 RARYLIMA 149
Cdd:COG3380 152 PFDAVVLA 159
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
15-71 |
1.95e-04 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 44.05 E-value: 1.95e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
1W4X_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIE----------TAGdvGGVWYWNRYPGARCDIESIE 71
Cdd:COG1053 2 HEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEkvpprgghtaAAQ--GGINAAGTNVQKAAGEDSPE 66
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
18-217 |
2.50e-04 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 43.58 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYALYRL-RELGRSVHVIetagdvggvwywnrypgarcdiesieycysfseeVLQEWNWTERYASQPEI 96
Cdd:COG1252 3 RIVIVGGGFAGLEAARRLrKKLGGDAEVT----------------------------------LIDPNPYHLFQPLLPEV 48
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 97 LR-YINFVADKFDLRS-----GITFHT-TVTaaAFDEATNtwTVDTNHGDRIRARYLIMASGqlSVPQLPNFPGLKDFAG 169
Cdd:COG1252 49 AAgTLSPDDIAIPLREllrraGVRFIQgEVT--GIDPEAR--TVTLADGRTLSYDYLVIATG--SVTNFFGIPGLAEHAL 122
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
1W4X_A 170 NLYHTGN----WPH------EPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQR 217
Cdd:COG1252 123 PLKTLEDalalRERllaafeRAERRRLLTIVVVGGGPTGVELAGELAELLRKLLRYPG 180
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
19-53 |
5.22e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 42.57 E-value: 5.22e-04
10 20 30
....*....|....*....|....*....|....*
1W4X_A 19 VLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:PRK07233 2 IAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGG 36
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
14-85 |
5.78e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 42.57 E-value: 5.78e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
1W4X_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYcYSFSEEVLQEWN 85
Cdd:PRK07208 2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYKGNRFDIGGHRF-FSKSPEVMDLWN 72
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
18-53 |
7.52e-04 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 42.00 E-value: 7.52e-04
10 20 30
....*....|....*....|....*....|....*.
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
18-53 |
1.08e-03 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 41.76 E-value: 1.08e-03
10 20 30
....*....|....*....|....*....|....*.
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:COG3349 5 RVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGG 40
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
18-53 |
1.10e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 41.50 E-value: 1.10e-03
10 20 30
....*....|....*....|....*....|....*.
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| PRK06134 |
PRK06134 |
putative FAD-binding dehydrogenase; Reviewed |
5-64 |
1.46e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 180419 [Multi-domain] Cd Length: 581 Bit Score: 41.24 E-value: 1.46e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
1W4X_A 5 TTVDSRRQPPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGV------WYW-NRYPGAR 64
Cdd:PRK06134 1 TPSAAAYPPDLECDVLVIGSGAAGLSAAVTAAWHGLKVIVVEKDPVFGGTtawsggWMWiPRNPLAR 67
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
15-57 |
1.81e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 41.04 E-value: 1.81e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
1W4X_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVI--ETAGDVGGVWYW 57
Cdd:PRK12834 3 MDADVIVVGAGLAGLVAAAELADAGKRVLLLdqENEANLGGQAFW 47
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
18-53 |
3.52e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 39.83 E-value: 3.52e-03
10 20 30
....*....|....*....|....*....|....*.
1W4X_A 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
Cdd:COG1233 5 DVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGG 40
|
|
| NAD_binding_9 |
pfam13454 |
FAD-NAD(P)-binding; |
21-153 |
3.61e-03 |
|
FAD-NAD(P)-binding;
Pssm-ID: 433222 [Multi-domain] Cd Length: 155 Bit Score: 38.41 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 21 VVGAGFSGLYALYRL-RELGR---SVHVIETAGD-VGGVWY-------WNRYPGARcdiesIEYCYSFSEEvLQEW---- 84
Cdd:pfam13454 2 IVGGGPSGLALLERLlARAPKrplEITLFDPSPPgAGGVYRtdqspehLLNVPASR-----MSLFPDDPPH-FLEWlrar 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 85 -------NWTER-YASQPEILRYINFVADKF--DLRSGITFH---TTVTAAAFDEatNTWTVDTNHGDRIRARYLIMASG 151
Cdd:pfam13454 76 galdeapGLDPDdFPPRALYGRYLRDRFEEAlaRAPAGVTVRvhrARVTDLRPRG--DGYRVLLADGRTLAADAVVLATG 153
|
..
1W4X_A 152 QL 153
Cdd:pfam13454 154 HG 155
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
16-53 |
4.09e-03 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 40.00 E-value: 4.09e-03
10 20 30
....*....|....*....|....*....|....*....
1W4X_A 16 EVDVLVVGAGFSGLYALYRLR-ELGRSVHVIETAGDVGG 53
Cdd:PLN02576 12 SKDVAVVGAGVSGLAAAYALAsKHGVNVLVTEARDRVGG 50
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
15-52 |
6.05e-03 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 38.97 E-value: 6.05e-03
10 20 30
....*....|....*....|....*....|....*....
1W4X_A 15 EEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDVG 52
Cdd:COG0579 3 EMYDVVIIGAGIVGLALARELSRYeDLKVLVLEKEDDVA 41
|
|
| Lycopene_cycl |
pfam05834 |
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ... |
18-181 |
7.28e-03 |
|
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.
Pssm-ID: 310433 [Multi-domain] Cd Length: 380 Bit Score: 38.94 E-value: 7.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 18 DVLVVGAGFSGLYALYRLRE--LGRSVHVIETAGDVGG----VW-YWNRypgarcDIESIEYCYSFSeevlqeWNWTERY 90
Cdd:pfam05834 1 DVVIIGAGPAGLSLAARLAAakPGLSVVLIEPGPSLLRpnnyVWsDEFE------DLGALEDCVGHS------WPGTRVH 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1W4X_A 91 ASQPEI----LRYINFVADKFDLR-------SGITFH-TTVTAAAFDEATNTWTVdTNHGDRIRARYLIMASGQLSVPQL 158
Cdd:pfam05834 69 FDDGKPiligRAYGRVSSKRLEEEmlqrcveNGVIRLnAKVESVEADPVGESLVV-CEGGRTIRARLVFDARGLGSLPPG 147
|
170 180
....*....|....*....|...
1W4X_A 159 PNfPGLKDFAGNLYHTGNWPHEP 181
Cdd:pfam05834 148 RT-LGYQTFYGVEVEVDNPPFDP 169
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
13-57 |
7.62e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 39.01 E-value: 7.62e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
1W4X_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVI--ETAGDVGGVWYW 57
Cdd:COG3573 2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLdqEPEANLGGQAFW 48
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
19-60 |
7.65e-03 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 38.96 E-value: 7.65e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
1W4X_A 19 VLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVwywNRY 60
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGL---LRY 162
|
|
| |
