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Conserved domains on  [gi|55670463|pdb|1VM8|B]
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Chain B, UDP-N-acetylglucosamine pyrophosphorylase

Protein Classification

UDPGP type 1 family protein( domain architecture ID 10135883)

UDPGP type 1 family protein such as human UDP-N-acetylhexosamine pyrophosphorylase that catalyzes the last step in biosynthesis of uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) by converting UTP and glucosamine 1-phosphate (GlcNAc-1-P) to the sugar nucleotide

EC:  2.7.-.-
Gene Ontology:  GO:0016772
SCOP:  4000691|3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
UDPGlcNAc_PPase cd04193
UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine ...
100-422 0e+00

UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.


:

Pssm-ID: 133036  Cd Length: 323  Bit Score: 563.77  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      100 QAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEKHHGNKCTIPWYI*TS 179
Cdd:cd04193   1 KEWEEAGLKAIAEGKVAVLLLAGGQGTRLGFDGPKGMFPVGLPSKKSLFQLQAERILKLQELAGEASGKKVPIPWYIMTS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      180 GRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQRGICSI 259
Cdd:cd04193  81 EATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVDFDGKILLEEKGKIAMAPNGNGGLYKALQTAGILEDMKKRGIKYI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      260 HVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRSSDGRLLFNAGN 339
Cdd:cd04193 161 HVYSVDNILVKVADPVFIGFCISKGADVGAKVVRKRYPTEKVGVVVLVDGKPQVVEYSEISDELAEKRDADGELQYNAGN 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      340 IANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGYFIKPDKPNGIK*EKFVFDIFQFAKKFVVYEVLREDEFSPLK 419
Cdd:cd04193 241 IANHFFSLDFLEKAAEMEEPSLPYHIAKKKIPYVDLEGGLVKPDEPNGIKLELFIFDVFPFAKNFVCLEVDREEEFSPLK 320

                ...
1VM8_B      420 NAD 422
Cdd:cd04193 321 NAD 323
 
Name Accession Description Interval E-value
UDPGlcNAc_PPase cd04193
UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine ...
100-422 0e+00

UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.


Pssm-ID: 133036  Cd Length: 323  Bit Score: 563.77  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      100 QAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEKHHGNKCTIPWYI*TS 179
Cdd:cd04193   1 KEWEEAGLKAIAEGKVAVLLLAGGQGTRLGFDGPKGMFPVGLPSKKSLFQLQAERILKLQELAGEASGKKVPIPWYIMTS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      180 GRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQRGICSI 259
Cdd:cd04193  81 EATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVDFDGKILLEEKGKIAMAPNGNGGLYKALQTAGILEDMKKRGIKYI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      260 HVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRSSDGRLLFNAGN 339
Cdd:cd04193 161 HVYSVDNILVKVADPVFIGFCISKGADVGAKVVRKRYPTEKVGVVVLVDGKPQVVEYSEISDELAEKRDADGELQYNAGN 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      340 IANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGYFIKPDKPNGIK*EKFVFDIFQFAKKFVVYEVLREDEFSPLK 419
Cdd:cd04193 241 IANHFFSLDFLEKAAEMEEPSLPYHIAKKKIPYVDLEGGLVKPDEPNGIKLELFIFDVFPFAKNFVCLEVDREEEFSPLK 320

                ...
1VM8_B      420 NAD 422
Cdd:cd04193 321 NAD 323
PLN02435 PLN02435
probable UDP-N-acetylglucosamine pyrophosphorylase
18-518 6.12e-137

probable UDP-N-acetylglucosamine pyrophosphorylase


Pssm-ID: 215238  Cd Length: 493  Bit Score: 405.79  E-value: 6.12e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        18 LKQRLSQAGQEHLLQFWNELSEAQQ*ELY*ELQA*NFEELNSFFRKAIGEfdrsshQEKVDAR*EPVPRQVLGSAT-RDQ 96
Cdd:PLN02435  25 LLERLKDYGQEDAFALWDELSPEERDLLVRDIESLDLPRIDRIIRCSLRS------QGLPVPAIEPVPENSVSTVEeRTP 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        97 EQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLA----EKHHGNKCTI 172
Cdd:PLN02435  99 EDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAaqasSEGPGRPVTI 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       173 PWYI*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*E 252
Cdd:PLN02435 179 HWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAKAPDGNGGVYAALKSSRLLEDMA 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       253 QRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--VDGVYQVVEYSEI--SLATAQRRS 328
Cdd:PLN02435 259 SRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRrgKGGPLTVVEYSELdqAMASAINQQ 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       329 SdGRLLFNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDsqGYFIkpdkpnGIK*EKFVFDIFQFAKKFVVYE 408
Cdd:PLN02435 339 T-GRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIH--GYTM------GLKLEQFIFDAFPYAPSTALFE 409
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       409 VLREDEFSPLKNADSQNgKDNPTTARHAL*SLHHCWVLNAGGhFIdengsrLPAIPRSATNgkseaitadvnhnlkdand 488
Cdd:PLN02435 410 VLREEEFAPVKNANGSN-FDTPESARLLVLRLHTRWVVAAGG-FL------THSVPLYATG------------------- 462
                        490       500       510
                 ....*....|....*....|....*....|
1VM8_B       489 vpiqCEISPLISYAGEGLEGYVADKEFHAP 518
Cdd:PLN02435 463 ----VEVSPLCSYAGENLEAICRGRTFHAP 488
QRI1 COG4284
UDP-N-acetylglucosamine pyrophosphorylase [Carbohydrate transport and metabolism];
18-430 1.57e-129

UDP-N-acetylglucosamine pyrophosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 443425  Cd Length: 402  Bit Score: 383.47  E-value: 1.57e-129
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       18 LKQRLSQAGQEHLLQFWNELSEAQQ*ELY*ELQA*NFEElnsfFRKAIGEFDRSSHQEKVDAR*--EPVPRQVLGSATRD 95
Cdd:COG4284   1 LIEKLEPHGQEHLLRFWDELSEAQQKMLEAQIEEIDIDV----FQHLYRQLVLAEGATGLIPESdiEPAPVTDLPLTDLD 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       96 QEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKlqqlAEKHHGnkCTIPWY 175
Cdd:COG4284  77 EVDRDRAEEAGEEALRAGKVAVILLAGGQGTRLGFDGPKGLLPVRPVKGKSLFDLIAEQVLA----ARRRYG--VPLPLY 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      176 I*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA-*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQR 254
Cdd:COG4284 151 IMTSFRTHEDTLAFLEEHDYFGLDGLPVHFFLQGMEPAlDADLGPVLLPADPELELCPPGHGGIYTALLASGLLDKLLER 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      255 GICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEisLATAQRRSSDGRLL 334
Cdd:COG4284 231 GIRYLFVSNVDNPLGAVPDPAFAGWHAASGAPFTAKVVRRTPPDEKVGHLARVDGRLILREYSQ--LPDEEAEAFTGELR 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      335 FNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGyfiKPDKPNGIK*EKFVFDIFQFAKKFVVYEVLREDE 414
Cdd:COG4284 309 HPYGNINNHWFDLDFLKRLLDERGLGLPLHRAEKKVDPLDESG---KPTSPNVIKFETFMFDAIPLFDGAVAIEVDREER 385
                       410
                ....*....|....*.
1VM8_B      415 FSPLKNAdsqNGKDNP 430
Cdd:COG4284 386 FAPVKNT---NGSDSP 398
UDPGP pfam01704
UTP--glucose-1-phosphate uridylyltransferase; This family consists of UTP--glucose-1-phosphate ...
57-484 6.65e-107

UTP--glucose-1-phosphate uridylyltransferase; This family consists of UTP--glucose-1-phosphate uridylyltransferases, EC:2.7.7.9. Also known as UDP-glucose pyrophosphorylase (UDPGP) and Glucose-1-phosphate uridylyltransferase. UTP--glucose-1-phosphate uridylyltransferase catalyzes the interconversion of MgUTP + glucose-1-phosphate and UDP-glucose + MgPPi. UDP-glucose is an important intermediate in mammalian carbohydrate interconversion involved in various metabolic roles depending on tissue type. In Dictyostelium (slime mold) mutants in this enzyme abort the development cycle. Also within the family is UDP-N-acetylglucosamine or AGX1 and two hypothetical proteins from Borrelia burgdorferi the lyme disease spirochaete Swiss:O51893 and Swiss:O51036.


Pssm-ID: 460300  Cd Length: 412  Bit Score: 325.62  E-value: 6.65e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B         57 LNSFFRKAIGEFDRSSHQEKVD-AR*EPVPRQVLgsatRDQEQLQA--WESEGLsqisQNKVAVLLLAGGQGTRLGVSYP 133
Cdd:pfam01704   1 LDGFFKLFSRYLSEKGKQEKIDwDKIKPPPEEEI----VDYEDLQEpeEEIKEL----LNKLAVLKLNGGLGTSMGCVGP 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        134 KG*YDVGlpSHKTLFQIQAERILKLqqlaekHHGNKCTIPWYI*TSGRT*ESTKEFFTKHKFfglKKENVVFFQQG*LPA 213
Cdd:pfam01704  73 KSLIEVR--DGLTFLDLIVQQIEHL------NKKYNVDVPLVLMNSFNTDEDTKKIIRKYKG---HKVDILTFNQSRYPR 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        214 *SFDGKIILEEKNKVS*---APDGNGGLYRALAAQNIVED*EQRGICSIHVYCVDNiLVKVADPRFIGFCIQKGADCGAK 290
Cdd:pfam01704 142 IDKDTLLPVPKSADSDEeewYPPGHGDLYESLYNSGLLDKLLAEGKEYLFVSNIDN-LGATVDLNILNYMVDNGAEFLME 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        291 VVEKTNPTEPVGVVCRVDGVYQVVEYSEI-SLATAQRRSSDGRLLFNAGNIanhFFTVPFLKDVVNvyEPQLQHHVAQKK 369
Cdd:pfam01704 221 VTDKTRADVKGGTLIEYDGKLRLLEIAQVpKEHVDEFKSIKKFKIFNTNNI---WINLKALKRVVE--EGELQLEIIVNK 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        370 iPYVDSQGYFIKPDKPNGIK*EKFvfdifqfaKKFVVYEVLReDEFSPLKNADSqngkdnpttarhAL*SLHHCWVLNAG 449
Cdd:pfam01704 296 -KTLDNGENVIQLETAVGAAIKNF--------KNAIGINVPR-SRFLPVKTTSD------------LLLVMSDLYVLNHG 353
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        450 -------------------GHF--IDENGSRLPAIPrSATNGKSEAITADV----NHNLK 484
Cdd:pfam01704 354 slimnpkrmfgtppvvllgDHFkkVDEFLKRFPSIP-DLLELDHLTVSGDVtfgrNVTLK 412
 
Name Accession Description Interval E-value
UDPGlcNAc_PPase cd04193
UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine ...
100-422 0e+00

UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc; UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.


Pssm-ID: 133036  Cd Length: 323  Bit Score: 563.77  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      100 QAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEKHHGNKCTIPWYI*TS 179
Cdd:cd04193   1 KEWEEAGLKAIAEGKVAVLLLAGGQGTRLGFDGPKGMFPVGLPSKKSLFQLQAERILKLQELAGEASGKKVPIPWYIMTS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      180 GRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQRGICSI 259
Cdd:cd04193  81 EATHEETRKFFKENNYFGLDPEQVHFFQQGMLPCVDFDGKILLEEKGKIAMAPNGNGGLYKALQTAGILEDMKKRGIKYI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      260 HVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEISLATAQRRSSDGRLLFNAGN 339
Cdd:cd04193 161 HVYSVDNILVKVADPVFIGFCISKGADVGAKVVRKRYPTEKVGVVVLVDGKPQVVEYSEISDELAEKRDADGELQYNAGN 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      340 IANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGYFIKPDKPNGIK*EKFVFDIFQFAKKFVVYEVLREDEFSPLK 419
Cdd:cd04193 241 IANHFFSLDFLEKAAEMEEPSLPYHIAKKKIPYVDLEGGLVKPDEPNGIKLELFIFDVFPFAKNFVCLEVDREEEFSPLK 320

                ...
1VM8_B      420 NAD 422
Cdd:cd04193 321 NAD 323
PLN02435 PLN02435
probable UDP-N-acetylglucosamine pyrophosphorylase
18-518 6.12e-137

probable UDP-N-acetylglucosamine pyrophosphorylase


Pssm-ID: 215238  Cd Length: 493  Bit Score: 405.79  E-value: 6.12e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        18 LKQRLSQAGQEHLLQFWNELSEAQQ*ELY*ELQA*NFEELNSFFRKAIGEfdrsshQEKVDAR*EPVPRQVLGSAT-RDQ 96
Cdd:PLN02435  25 LLERLKDYGQEDAFALWDELSPEERDLLVRDIESLDLPRIDRIIRCSLRS------QGLPVPAIEPVPENSVSTVEeRTP 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        97 EQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLA----EKHHGNKCTI 172
Cdd:PLN02435  99 EDRERWWKMGLKAISEGKLAVVLLSGGQGTRLGSSDPKGCFNIGLPSGKSLFQLQAERILCVQRLAaqasSEGPGRPVTI 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       173 PWYI*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*E 252
Cdd:PLN02435 179 HWYIMTSPFTDEATRKFFESHKYFGLEADQVTFFQQGTLPCVSKDGKFIMETPFKVAKAPDGNGGVYAALKSSRLLEDMA 258
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       253 QRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCR--VDGVYQVVEYSEI--SLATAQRRS 328
Cdd:PLN02435 259 SRGIKYVDCYGVDNALVRVADPTFLGYFIDKGVASAAKVVRKAYPQEKVGVFVRrgKGGPLTVVEYSELdqAMASAINQQ 338
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       329 SdGRLLFNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDsqGYFIkpdkpnGIK*EKFVFDIFQFAKKFVVYE 408
Cdd:PLN02435 339 T-GRLRYCWSNVCLHMFTLDFLNQVANGLEKDSIYHLAEKKIPSIH--GYTM------GLKLEQFIFDAFPYAPSTALFE 409
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       409 VLREDEFSPLKNADSQNgKDNPTTARHAL*SLHHCWVLNAGGhFIdengsrLPAIPRSATNgkseaitadvnhnlkdand 488
Cdd:PLN02435 410 VLREEEFAPVKNANGSN-FDTPESARLLVLRLHTRWVVAAGG-FL------THSVPLYATG------------------- 462
                        490       500       510
                 ....*....|....*....|....*....|
1VM8_B       489 vpiqCEISPLISYAGEGLEGYVADKEFHAP 518
Cdd:PLN02435 463 ----VEVSPLCSYAGENLEAICRGRTFHAP 488
QRI1 COG4284
UDP-N-acetylglucosamine pyrophosphorylase [Carbohydrate transport and metabolism];
18-430 1.57e-129

UDP-N-acetylglucosamine pyrophosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 443425  Cd Length: 402  Bit Score: 383.47  E-value: 1.57e-129
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       18 LKQRLSQAGQEHLLQFWNELSEAQQ*ELY*ELQA*NFEElnsfFRKAIGEFDRSSHQEKVDAR*--EPVPRQVLGSATRD 95
Cdd:COG4284   1 LIEKLEPHGQEHLLRFWDELSEAQQKMLEAQIEEIDIDV----FQHLYRQLVLAEGATGLIPESdiEPAPVTDLPLTDLD 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       96 QEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKlqqlAEKHHGnkCTIPWY 175
Cdd:COG4284  77 EVDRDRAEEAGEEALRAGKVAVILLAGGQGTRLGFDGPKGLLPVRPVKGKSLFDLIAEQVLA----ARRRYG--VPLPLY 150
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      176 I*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA-*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQR 254
Cdd:COG4284 151 IMTSFRTHEDTLAFLEEHDYFGLDGLPVHFFLQGMEPAlDADLGPVLLPADPELELCPPGHGGIYTALLASGLLDKLLER 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      255 GICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEisLATAQRRSSDGRLL 334
Cdd:COG4284 231 GIRYLFVSNVDNPLGAVPDPAFAGWHAASGAPFTAKVVRRTPPDEKVGHLARVDGRLILREYSQ--LPDEEAEAFTGELR 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      335 FNAGNIANHFFTVPFLKDVVNVYEPQLQHHVAQKKIPYVDSQGyfiKPDKPNGIK*EKFVFDIFQFAKKFVVYEVLREDE 414
Cdd:COG4284 309 HPYGNINNHWFDLDFLKRLLDERGLGLPLHRAEKKVDPLDESG---KPTSPNVIKFETFMFDAIPLFDGAVAIEVDREER 385
                       410
                ....*....|....*.
1VM8_B      415 FSPLKNAdsqNGKDNP 430
Cdd:COG4284 386 FAPVKNT---NGSDSP 398
PTZ00339 PTZ00339
UDP-N-acetylglucosamine pyrophosphorylase; Provisional
20-520 9.43e-113

UDP-N-acetylglucosamine pyrophosphorylase; Provisional


Pssm-ID: 240368  Cd Length: 482  Bit Score: 343.26  E-value: 9.43e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        20 QRLSQAGQEHLLQFWNELSEAQQ*EL----Y*ELQA*NFEELNSFFRKAIGEFDRS-----SHQEKVDAR*EPVPRQVLG 90
Cdd:PTZ00339   3 KVLTGDGQDHLREALKRRSEGEFTPLatqiLSSLTNVDFKHRNAVLEPKLEEYNAEapvgiDIDSIHNCNIEPPNNNTFI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        91 SATRDQEQLQAWESEGLSQISQNKVAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEKHH--GN 168
Cdd:PTZ00339  83 DIYEKEKERKELKESGLEIIKKGEVAVLILAGGLGTRLGSDKPKGLLECTPVKKKTLFQFHCEKVRRLEEMAVAVSggGD 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       169 KCTIPWYI*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*S-FDGKIILEEKNKVS*APDGNGGLYRALAAQNI 247
Cdd:PTZ00339 163 DPTIYILVLTSSFNHDQTRQFLEENNFFGLDKEQVIFFKQSSLPCYDeNTGRFIMSSQGSLCTAPGGNGDVFKALAKCSE 242
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       248 VED*EQRGICSIHVYCVDNILVKVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVEYSEIS-LATAQR 326
Cdd:PTZ00339 243 LMDIVRKGIKYVQVISIDNILAKVLDPEFIGLASSFPAHDVLNKCVKREDDESVGVFCLKDYEWQVVEYTEINeRILNND 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       327 RSSDGRLLFNAGNIANHFFTVPFLKDVVNVY-EPQLQHHVAQKKIPYVDSQGyfikpDKPNGIK*EKFVFDIFQFAKKFV 405
Cdd:PTZ00339 323 ELLTGELAFNYGNICSHIFSLDFLKKVAANRlYESTPYHAARKKIPYINGPT-----DKTMGIKLEAFIFDIFRYAKNVL 397
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B       406 VYEVLREDEFSPLKNADSQNGkDNPTTARHAL*SLHHCWVLNAgghfidenGSRLPAIPRSATNGkseaitadvnhnlkd 485
Cdd:PTZ00339 398 ILEVDREDEFAPIKNADGAAA-DTILNAQKLLLSLHTRWLEAA--------LETVAGNPREGLNL--------------- 453
                        490       500       510
                 ....*....|....*....|....*....|....*
1VM8_B       486 andvpiqCEISPLISYAGEGLEGYVADKEFHAPLI 520
Cdd:PTZ00339 454 -------CEISPLVSYGGEGLFQYPGKKILGLPEI 481
UGPase_euk_like cd04180
Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes; This family ...
115-420 3.42e-111

Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes; This family includes UDP-Glucose Pyrophosphorylase (UDPase) and UDPGlcNAc pyrophosphorylase enzymes. The two enzymes share significant sequence and structure similarity. UDP-Glucose Pyrophosphorylase catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans . UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1P from PPi and UDPGlcNAc, which is a key precursor of N- and O-linked glycosylations and is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker anchoring a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis.


Pssm-ID: 133023  Cd Length: 266  Bit Score: 331.44  E-value: 3.42e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      115 VAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEkhhgNKCTIPWYI*TSGRT*ESTKEFFTKHK 194
Cdd:cd04180   1 VAVVLLAGGLGTRLGKDGPKSSTDVGLPSGQCFLQLIGEKILTLQEIDL----YSCKIPEQLMNSKYTHEKTQCYFEKIN 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      195 ffgLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*APDGNGGLYRALAAQNIVED*EQRGICSIHVYCVDNILVKVADP 274
Cdd:cd04180  77 ---QKNSYVITFMQGKLPLKNDDDARDPHNKTKCHLFPCGHGDVVLALIHSGHLNKLLEKGYRYIHFIGVDNLLVKVADP 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      275 RFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVD-GVYQVVEYSEISLATAQRR------SSDGRLLFNAGNIANHFFTV 347
Cdd:cd04180 154 LFIGIAIQNRKAINQKVVPKTRNEESGGYRIANInGRVQLLEYDQIKKLLKQKMvnnqipKDIDDAPFFLFNTNNLINFL 233
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
1VM8_B      348 PFLKDVVNvyepqlqhhvaqkkipyvdsqgyfikpdkpngik*ekfvfDIFQFAKKFVVYEVLREDEFSPLKN 420
Cdd:cd04180 234 VEFKDRVD----------------------------------------DIIEFTDDIVGVMVHRAEEFAPVKN 266
UDPGP pfam01704
UTP--glucose-1-phosphate uridylyltransferase; This family consists of UTP--glucose-1-phosphate ...
57-484 6.65e-107

UTP--glucose-1-phosphate uridylyltransferase; This family consists of UTP--glucose-1-phosphate uridylyltransferases, EC:2.7.7.9. Also known as UDP-glucose pyrophosphorylase (UDPGP) and Glucose-1-phosphate uridylyltransferase. UTP--glucose-1-phosphate uridylyltransferase catalyzes the interconversion of MgUTP + glucose-1-phosphate and UDP-glucose + MgPPi. UDP-glucose is an important intermediate in mammalian carbohydrate interconversion involved in various metabolic roles depending on tissue type. In Dictyostelium (slime mold) mutants in this enzyme abort the development cycle. Also within the family is UDP-N-acetylglucosamine or AGX1 and two hypothetical proteins from Borrelia burgdorferi the lyme disease spirochaete Swiss:O51893 and Swiss:O51036.


Pssm-ID: 460300  Cd Length: 412  Bit Score: 325.62  E-value: 6.65e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B         57 LNSFFRKAIGEFDRSSHQEKVD-AR*EPVPRQVLgsatRDQEQLQA--WESEGLsqisQNKVAVLLLAGGQGTRLGVSYP 133
Cdd:pfam01704   1 LDGFFKLFSRYLSEKGKQEKIDwDKIKPPPEEEI----VDYEDLQEpeEEIKEL----LNKLAVLKLNGGLGTSMGCVGP 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        134 KG*YDVGlpSHKTLFQIQAERILKLqqlaekHHGNKCTIPWYI*TSGRT*ESTKEFFTKHKFfglKKENVVFFQQG*LPA 213
Cdd:pfam01704  73 KSLIEVR--DGLTFLDLIVQQIEHL------NKKYNVDVPLVLMNSFNTDEDTKKIIRKYKG---HKVDILTFNQSRYPR 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        214 *SFDGKIILEEKNKVS*---APDGNGGLYRALAAQNIVED*EQRGICSIHVYCVDNiLVKVADPRFIGFCIQKGADCGAK 290
Cdd:pfam01704 142 IDKDTLLPVPKSADSDEeewYPPGHGDLYESLYNSGLLDKLLAEGKEYLFVSNIDN-LGATVDLNILNYMVDNGAEFLME 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        291 VVEKTNPTEPVGVVCRVDGVYQVVEYSEI-SLATAQRRSSDGRLLFNAGNIanhFFTVPFLKDVVNvyEPQLQHHVAQKK 369
Cdd:pfam01704 221 VTDKTRADVKGGTLIEYDGKLRLLEIAQVpKEHVDEFKSIKKFKIFNTNNI---WINLKALKRVVE--EGELQLEIIVNK 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        370 iPYVDSQGYFIKPDKPNGIK*EKFvfdifqfaKKFVVYEVLReDEFSPLKNADSqngkdnpttarhAL*SLHHCWVLNAG 449
Cdd:pfam01704 296 -KTLDNGENVIQLETAVGAAIKNF--------KNAIGINVPR-SRFLPVKTTSD------------LLLVMSDLYVLNHG 353
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        450 -------------------GHF--IDENGSRLPAIPrSATNGKSEAITADV----NHNLK 484
Cdd:pfam01704 354 slimnpkrmfgtppvvllgDHFkkVDEFLKRFPSIP-DLLELDHLTVSGDVtfgrNVTLK 412
UGGPase cd06424
UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose; UGGPase: UDP-Galactose/Glucose ...
115-306 1.04e-16

UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose; UGGPase: UDP-Galactose/Glucose Pyrophosphorylase catalyzes the reversible production of UDP-Glucose/UDP-Galactose and pyrophosphate (PPi) from Glucose-1-phosphate/Galactose-1-phosphate and UTP. Its dual substrate specificity distinguishes it from the single substrate enzyme UDP-glucose pyrophosphorylase. It may play a key role in the galactose metabolism in raffinose oligosaccharide (RFO) metabolizing plants. RFO raffinose is a major photoassimilate and is a galactosylderivative of sucrose (Suc) containing a galactose (Gal) moiety. Upon arriving at the sink tissue, the Gal moieties of the RFOs are initially removed by alpha-galactosidase and then are phosphorylated to Gal-1-P. Gal-1-P is converted to UDP-Gal. The UDP-Gal is further metabolized to UDP-Glc via an epimerase reaction. The UDP-Glc can be directly utilized in cell wall metabolism or in Suc synthesis. However, for the Suc synthesis UDP-Glc must be further metabolized to Glc-1-P. This can be carried out either by the UGPase in the reverse direction or by the dual substrate PPase itself operating in the reverse direction. According to the latter possibility, the three-step pathway of Gal-1-P to Glc-1-P could be carried out by a single PPase, functioning sequentially in reverse directions separated by the epimerase reaction.


Pssm-ID: 133046  Cd Length: 315  Bit Score: 80.96  E-value: 1.04e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      115 VAVLLLAGGQGTRLGVSYPKG*YDVGLPSHKTLFQIQAERILKLQQLAEKHHGNKctIPWYI*TSGRT*ESTKEFFTKHK 194
Cdd:cd06424   1 AVFVLVAGGLGERLGYSGIKIGLPVELTTNTTYLQYYLNYIRAFQEASKKGEKME--IPFVIMTSDDTHSKTLKLLEENN 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      195 FFGLKKENVVFFQQG*LPA-*SFDGKIILEEKNK--VS*APDGNGGLYRALAAQNIVED*EQRGICSIHVYCVDNILVKV 271
Cdd:cd06424  79 YFGLEKDQVHILKQEKVFClIDNDAHLALDPDNTysILTKPHGHGDVHTLLYNSGLLKKWIEAGYKWLVFFQDTNALAFK 158
                       170       180       190
                ....*....|....*....|....*....|....*
1VM8_B      272 ADPRFIGFCIQKGADCGAKVVEKTnPTEPVGVVCR 306
Cdd:cd06424 159 AIPAVLGVSATKSLDMNSLTVPRK-PKEAIGALCK 192
PLN02830 PLN02830
UDP-sugar pyrophosphorylase
16-236 2.42e-14

UDP-sugar pyrophosphorylase


Pssm-ID: 215444  Cd Length: 615  Bit Score: 75.88  E-value: 2.42e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        16 NDLKQRLSQAGQEHLLQFWNELSEAQQ*ELY*ELQA*NFEE-----LNSFFRKAIgEFDRSSHQEK--VDAR*EPVPR-Q 87
Cdd:PLN02830  28 RALVRRLLELGQSHLFEHWPEPGVDDDDKRRLLEQVARLDEsypggLAAYVSNAK-ELLADSKEGVnpFEGWTPSVPEgE 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B        88 VLGSATRDQEQLqawESEGLSQIsqNKVAVLLLAGGQGTRLGVSYPKg*ydVGLPSHKT----LFQIQAERILKLQQLAE 163
Cdd:PLN02830 107 VLEYGSEEFVEL---EEAGLREA--GNAAFVLVAGGLGERLGYSGIK----VALPTETAtgtcYLQLYIESILALQERAK 177
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
1VM8_B       164 KHHGNKCT-IPWYI*TSGRT*ESTKEFFTKHKFFGLKKENVVFFQQG*LPA*S-FDGKIILEEKN--KVS*APDGNG 236
Cdd:PLN02830 178 KRKAKKGRkIPLVIMTSDDTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMdNDARLALDPNDpyKIQTKPHGHG 254
UGPase_euk cd00897
Eukaryotic UGPase catalyses the synthesis of UDP-Glucose; UGPase (UDP-Glucose ...
113-315 1.63e-05

Eukaryotic UGPase catalyses the synthesis of UDP-Glucose; UGPase (UDP-Glucose Pyrophosphorylase) catalyzes the reversible production of UDP-Glucose and pyrophosphate (PPi) from Glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids, glycoproteins, and proteoglycans. UGPase is found in both prokaryotes and eukaryotes. Interestingly, while the prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity. This family consists of mainly eukaryotic UTP-glucose-1-phosphate uridylyltransferases.


Pssm-ID: 132998  Cd Length: 300  Bit Score: 46.86  E-value: 1.63e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      113 NKVAVLLLAGGQGTRLGVSYPKG*YDVglPSHKTLFQIQAERILKLQqlaeKHHGnkCTIPWYI*TSGRT*ESTKEFFTK 192
Cdd:cd00897   2 NKLVVLKLNGGLGTSMGCTGPKSLIEV--RDGKTFLDLTVQQIEHLN----KTYG--VDVPLVLMNSFNTDEDTKKILKK 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VM8_B      193 hkfFGLKKENVVFFQQG*LPA*SFDGKIILEEKNKVS*---APDGNGGLYRALAAQNIVED*EQRGICSIHVYCVDNiLV 269
Cdd:cd00897  74 ---YAGVNVDIHTFNQSRYPRISKETLLPVPSWADSPDeewYPPGHGDIFESLYNSGLLDTLLAQGKEYLFVSNIDN-LG 149
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
1VM8_B      270 KVADPRFIGFCIQKGADCGAKVVEKTNPTEPVGVVCRVDGVYQVVE 315
Cdd:cd00897 150 ATVDLRILNHMVDNKAEYIMEVTDKTRADVKGGTLIQYEGKLRLLE 195
CDP-ME_synthetase cd02516
CDP-ME synthetase is involved in mevalonate-independent isoprenoid production; ...
115-134 9.63e-03

CDP-ME synthetase is involved in mevalonate-independent isoprenoid production; 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.


Pssm-ID: 133009 [Multi-domain]  Cd Length: 218  Bit Score: 37.89  E-value: 9.63e-03
                        10        20
                ....*....|....*....|
1VM8_B      115 VAVLLLAGGQGTRLGVSYPK 134
Cdd:cd02516   1 VAAIILAAGSGSRMGADIPK 20
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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