Conserved Protein Domain Family
TraF-like

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TIGR02740: TraF-like 
TraF-like protein
This protein is related to the F-type conjugation system pilus assembly proteins TraF (TIGR02739)and TrbB (TIGR02738) both of which exhibit a thioredoxin fold. The protein represented by this model has the same length and architecture as TraF, but lacks the CXXC-motif found in TrbB and believed to be responsible for the disulfide isomerase activity of that protein.
Statistics
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PSSM-Id: 274275
Aligned: 8 rows
Threshold Bit Score: 333.226
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAB93802       11 LAVLVGCTVYSHSFLAVAAYGQEqeiktsgdvyaggKEFQKEKDQGWFWKKD-PPMPVKEEPV-PAPepekkpddekeqd 88  Proteus vulgaris
jgi:Daro_2662   9 LPLLLLTFTVILGINSAAAQDAA-------------SRYWSDSWRGWHFYEA-PAPEEIEHPLlPGKat----------- 63  Dechloromonas ...
AAW83078        1 mkrvrMAVMLIFSLHASNLRAADdgmg------wydQDIWKNENRAFLWYPDaKKPKQAG-------------------- 54  Neisseria gono...
AAD03949        7 IALLAASSVALTGTAPLRASEGDgvev-----rqseDALYCKERKLGTWFYC-EKPKEEPR------------------- 61  Novosphingobiu...
CAI10354        8 KPVRAILVSLAIVAATSSVHAQS---------------FFKRGGEGYFWYET-PPPPAEPVQLeKEPepp---------- 61  Aromatoleum ar...
BAC41668        6 fPILLLAAAISSTSLAGETKPTEsktp-----qvggSSFYQDKERGWFWYED-PPPEQEPEKLePAPvpaa--------- 70  Pseudomonas re...
AAF69964        4 LTLIPSKMLVLLSLFITGVHANEeqalikdtpfvsgQAF----KKGFFWYDD-PTRKTEEEITeTKP------------- 65  Salmonella ent...
AAL59678       20 FILWVTIPIIIFFLFILPAHASD-------------GQFYQRGQEGWFWYQViPEPAEDEEPIk---------------- 70  Vibrio cholerae
BAB93802       89 kqmpvapPSPPSAQEEKKGPAPFs-vVWFRENIQDIRDRAIDDPTPENVRAYLLAQRIMLDKASRYKDMAQLISITDPII 167 Proteus vulgaris
jgi:Daro_2662  64 ------aTAPPAQPSRAPELVEF---ERLQKTLEETRNIAIMRPSEANVRRYMELESLVVARASYFADVAQRVAWATPQL 134 Dechloromonas ...
AAW83078       55 -------QNRPQNTPVRHELAEF---EMLQRNLDESRKIAVMNPTPQNLKRYIELQEVVMNKSAAFADQWQRVIWPNPNL 124 Neisseria gono...
AAD03949       62 -------KAAAAQPPARERLAAI------GTQLEELKARAILEPSPENVTAYVRFQREQLDRSSMFADVWQRALWQDPGL 128 Novosphingobiu...
CAI10354       62 -----asASPATETAANTGTQPFs-tAWLRDNLPVLLEKAMDSGKREDMEAYLYAQRIALDKAQNFAHLQQLVVKTDPIL 135 Aromatoleum ar...
BAC41668       71 ----ppqAEREASEPAAPELPPTgsvAWIREMLPKLRDAAMDNPTKENVSAYFWANRIMMDKAERFSRRSADVIRNDPLL 146 Pseudomonas re...
AAF69964       66 -------PVASSTQPEQEEKIELn-sKWLKDNMPQLLTKAMDNPTPENLSRFYTAQRLMLDIGTRFSDKSKDYFLKNPMM 137 Salmonella ent...
AAL59678       71 -------PESGAAESSQSGLKPFs-aAWFREHMQSFMDKAIDEPTNENVRAYLYLQRVMMDKGSQFADVSQQVVMGDPVL 142 Vibrio cholerae
BAB93802      168 DETGR-RSTSSFGSLSQSVSAEENEKQVAREIGKKAGLFFFFKGEgCKLCSQQASVMQTFSYLTNIPVIPISIDGHNLPG 246 Proteus vulgaris
jgi:Daro_2662 135 DPTLQgRPVNAKALEVFDQAELVDRSRAIADLGKDHVLFFFYRSD-CPYCHAFAPTLAAFQARHGIQVVAISVDGGPLPS 213 Dechloromonas ...
AAW83078      125 DYSQRgRPNNQLAQQQYDHTRQQQKAGAIRKLAGENGIMFVFKSD-CPYCHTMAPILKNFADQYGIKVMPVSLDGGGINH 203 Neisseria gono...
AAD03949      129 DYTLQ-RPVSTLGKRAWIDERKTDRDRVMANLSQRYGVFYFFASS-CGACDIFSPILKAVSDKYGLAVLAVSTDGGPSST 206 Novosphingobiu...
CAI10354      136 DENNR-MPLDTFIRQTVLATNKEQKDEVTKHLASKGGIFMFFDSS-CSHCEKQFPVIGMLKERYGFETRFVSVDGKPLPG 213 Aromatoleum ar...
BAC41668      147 DEDMR-YPASNAASDALATAAGKQKETLLKLIAGSSALMFFYNGNdCILCEQAQAAVSALEFRYGFTVMPVSMDGAPLPG 225 Pseudomonas re...
AAF69964      138 SEKRR-QPVEKVALDAHRTVVEKNQQSVMKDIFTKSGLFFFFQST-CQFCHEESQILQFMENYYSVDILPVSMDGRPLQN 215 Salmonella ent...
AAL59678      143 DEISR-RPLATYAANRMDREAGAQRDVALGEVAKRAGLFFFYRSD-CPYCHAQAPIIESMALNYGFEVFAIAVDGLPLPS 220 Vibrio cholerae
BAB93802      247 npFPNV-RVDDGQAKKLQI---RNVPAIALAIP-PDQTRIVSFGPISADQLVKRTVLIAH-DAGLV 306 Proteus vulgaris
jgi:Daro_2662 214 --FPNA-RPDNGIATTLKV---SQVPAVFLAQPfTGKISPIGFGVLSESQLLERIATVSA-PQAEV 272 Dechloromonas aromatica RCB
AAW83078      204 --FPRA-LPNNGIAQRLNI---TTVPAMYVMDTkTKQFTPIGFGVMAQTTLEDRFLAYSR-PVGTL 262 Neisseria gonorrhoeae
AAD03949      207 --FPGY-MVDSGQYEKLGLgtdRQVPALVLFDSvTKQPMPIGYGILSQDEIMDRVFQLTQvKVGSD 269 Novosphingobium aromaticivorans
CAI10354      214 --MDNW-IPDAGQFQSLNL---KLTPTVVYAVP-PNNFYVVAQGAMSASGLVDRLLVVAE-SEKLI 271 Aromatoleum aromaticum EbN1
BAC41668      226 gkYPNT-QYDTGLAEQLGI---ITSPALALVIP-PNDVKIVSFSTVSMETATTRILMAAN-EAGLI 285 Pseudomonas resinovorans
AAF69964      216 glFQDFsVPNAQIIDQFKI---REVPTIFLVSKdGSSAQRISEGMITAEELKNTIILAAK-GMKLI 277 Salmonella enterica subsp. e...
AAL59678      221 geFPNY-KVDSGQAQSLSV---TTVPAVFLVDP-PNVITPIGQGAMSLDELNNRIILAAH-QAGWI 280 Vibrio cholerae
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