Conserved Protein Domain Family
apcB

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TIGR01337: apcB 
allophycocyanin, beta subunit
The alpha and beta subunits of allophycocyanin form heterodimers, six of which associate into larger aggregates as part of the phycobilisome, a light-harvesting complex of phycobiliproteins and linker proteins. This model describes allophycocyanin beta subunit. Other, homologous phyobiliproteins include allophycocyanin alpha chain and the phycocyanin and phycoerythrin alpha and beta chains. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 273559
Aligned: 4 rows
Threshold Bit Score: 239.719
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P34812         2 QDTITNILNKYDLTGKYLDNNALTQITTYLNTALQRLEVVEIIQSQSSKIIKEAAARMYSeQPELLRPGGNSYTTRKYAM 81  Aglaothamnion n...
P51261         2 QDAITSVINAADVQGKYLDDSSVEKLRGYFQTGELRVRAAATIAANAATIIKESVAKSLL-YSDITRPGGNMYTTRRYAA 80  Porphyra purpurea
O19896         4 QDSIVNIISTYDNAGKYLDSNAITNIKKYFDTADTRLGIVKIINANSSLIIQQASSQLFErNPELIRPSGNAYTTRRYAA 83  Cyanidium calda...
WP_010874140   2 RDAVTTLIKNYDLTGRYLDRNAMDELKAYFESGSARIAAAAMINANSATIVKRAAAQLFEeIPELIRPSGNAYTTRRFSA 81  Synechocystis s...
P34812        82 CLRDIEYYLRYATYAIIAGNNDILNERVLDGLKDTYNSLNVPIAPTVRSIQIMEEIIHNEISKQdlkiiKKSIISEPFDH 161 Aglaothamnion n...
P51261        81 CIRDLDYYLRYATYGMLAGDPSILEERVLNGLKETYNSLGVPIGATIQAILAMKEVTISLVGPD-----AGKEMGLYFDY 155 Porphyra purpurea
O19896        84 CLRDIDYYLRYASYSIVANDTSVLSSRVLAGLKDTYNSLGVPLASIVTLLELLKELIKEKTKNIn---dAHKYIDEPFLY 160 Cyanidium calda...
WP_010874140  82 CLRDMDYYLRYASYALIAADNNVLDERVLQGLRETYNSLGVPIGPTVRGIQIMKEMIEAMAEDSsl--nSTDFIASPFDH 159 Synechocystis s...
P34812       162 MIQNLS 167 Aglaothamnion neglectum
P51261       156 ICSGLS 161 Porphyra purpurea
O19896       161 MMKILC 166 Cyanidium caldarium
WP_010874140 160 MTRELS 165 Synechocystis sp. PCC 6803
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