1ZMA


Conserved Protein Domain Family
PedC_BrcD

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TIGR01295: PedC_BrcD 
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bacteriocin transport accessory protein, putative
This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Statistics
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PSSM-Id: 273542
Aligned: 4 rows
Threshold Bit Score: 162.8
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ZMA_A     7 FLDNIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSE-----EPSQLnDLQAFRS 81  Streptococcus pneum...
AAC95141  39 YLSNIQGIKAPTGKELLNIMHSDETYFLYIGYESCPYCREFSRTLSSFKTQNSFPIYYVDLEinystDLSSE-EFTEFKL 117 Brochothrix campestris
AAD56628   4 FLDNIKDLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSE-----EASQLnDLQAFRS 78  Streptococcus pneum...
P37249    49 YEENIRGVIPITLTQYLHKAQTGEKFIVFVGFKECVHCRKFSPVMKQYLQQSQHPIYYLDYGnngsfSMASQkQITDFYS 128 Pediococcus acidila...
1ZMA_A    82 RYGIPT----VPGFVHITDG-QINVRCDSSXSAQEIKDFAG 117 Streptococcus pneumoniae
AAC95141 118 FFDKKIgalyTPTFVRIEHKtPVSGFIGGSTTIQQLQSINS 158 Brochothrix campestris
AAD56628  79 RYGIPT----VPGFVHITDG-QINVRCDSSMSAQEIKDFAE 114 Streptococcus pneumoniae WU2
P37249   129 TFATPMsfmgTPTVALLDNGkVVSMTAGDDTTLSDLQQITA 169 Pediococcus acidilactici
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