Conserved Protein Domain Family
int

?
PHA02601: int 
integrase; Provisional
Statistics
?
PSSM-Id: 222904
Aligned: 10 rows
Threshold Bit Score: 532.766
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
165970235   1 MSVRN--LKDGskkPWLCECYPQGREGKRVRKRFATKGEATAYENFIMREVD---DKPWMGSKPDNRRLSELLETWWQVH 75 
148727179   1 MSVRKtdHKTK---PWLSEIYPDGRDGPRKRKRFATKGEALAWESHMLTAKPw-qQTEAVVATGDERRLSDLVAAWFGRH 76 
169936064   1 MSIRK--QPNG---KWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVN---KKPWLGEKEDRRHLSEVIDQWHSLY 72 
109302897   1 MGVRKdsTKGG---KWLAEFYHD---GKRVRKWFVTRGEATRFFNQEQAKNAtqsENVRVVLSNDLAPLSHYAHEWYELY 74 
41057380    1 MTVSK--QKNG---KWLCELYPNGREGRRIRRHFNTKGEAEAFELYTKNESG---DKPWLGKKEDRRRLSEIIQLWHNLH 72 
30065733    1 MAIKK--LDDG---RYEVDIRPRGRDGKRIRRKFERKAEALAFERYTIANAS---QKEWGGQRADRRTLSELLDIWWKYH 72 
17975106    1 MSVRN--LKDGskkPWLCECYPQGREGKRVRKRFATKGEATAYENFIMREVD---DKPWMGSKPDNRRLSELLETWWQVH 75 
17981816    1 MAVRKd-TKNG---KWLAEVYVN---GKRLRKWFLTKGDALRFYNQAKEQTTsavDSVQVLESSDLPALSFYVQEWFDLH 73 
9630357     1 MAIKK--LDDG---RYEVDIRPTGRNGKRIRRKFDKKSEAVAFEKYTLYNHH---NKEWLSKPTDKRRLSELTQIWWDLK 72 
9628601     1 MAVRKd-TKNG---KWLAEVYVN---GNASRKWFLTKGDALRFYNQAKEQTTsavDSVQVLESSDLPALSFYVQEWFDLH 73 
165970235  76 GHTIKSGKVVYRKTALTIKELGDPIASTFTSKQYLAFRASRVSHFNKENKS---------LSPTYQNFQLNLLSGMFSRL 146
148727179  77 GQTLADGERRRDKLVWLCEALDNPIATEFTSELFSAYRERRLAGELYVPGQrk------qVTPTTINREQLYLQAVFNEL 150
169936064  73 GQTLADPKRLMAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGvlm----spVKPRTVNLEQRNLSSVFGTL 148
109302897  75 GQTLNDGQARLNKLLNLCSHLGDPPANKFTTQDFAEYRKKRLAGKFSADPkr-------pPKQSTVNREHAYLRAVFNEL 147
41057380   73 GQALVASKSRLAKLQIVCNGLGDPIASRLTAKDWAHYRDKRLRGEI--DNGyhknpekwiAKPITVNREQQYLEAVFNEL 150
30065733   73 GQNHEHGTKEFNHLLKTISGIGDIPVSRMSKRALMDYRSIRLRDG---------------ISAATINRDMYRLSGMFTKL 137
17975106   76 GHTIKSGKVVYRKTALTIKELGDPIASTFTSKQYLAFRASRVSHFNKENKS---------LSPTYQNFQLNLLSGMFSRL 146
17981816   74 GKTLSDGEARLAKLKNLCANLGDPPANEFNAEIFADYRKRRLDGEFSVNKnn-------pPKEATVNREHAYLRAVFNEL 146
9630357    73 GKHEEHGKSNLGKIEIFTKITNDPCAFQITKSLISQYCATRRSQG---------------IKPSSINRDLTCISGMFTAL 137
9628601    74 GKTLSDGKARLAKLKNLCSNLGDPPANEFNAKIFADYRKRRLDGEFSVNKnn-------pPKEATVNREHAYLRAVFNEL 146
165970235 147 IKYKQWNLPNPLDDIEPIKVNQRALAYLDKADIQPFLQRLGGFESdgrsvsipeIVLIAKICLATGARISEALSLERSQI 226
148727179 151 ARLGVWSGGNPLADLRQYKVQESELAYLSQDEIEQLLDACKEQRD---------LWLIVMLCLSTGARWSEIEKVSRSQI 221
169936064 149 KKLGHWSAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSp-------sLLMIAKVCLATGARWSEAENLQGHQL 221
109302897 148 KSLGKWSGDNPLSEISLFKENETELAFLFGDEIRRLIDECDNSRNk-------dLGLITRICLATGARWSEAEQLKQAQV 220
41057380  151 KRLGEWSLPNPLDGIRVFKEAEKEMSWLTLEQIPQLLLACHQYGHe-------dLTQIVEICLATGARWSEAERLTRPQL 223
30065733  138 IQLDEFSGQHPIHGLPPLAEANPEMTFLEKAEIEKLLNVLAGDDL-----------LVALLCLSTGGRWTEVATLKPAQI 206
17975106  147 IKYKQWNLPNPLDDIEPIKVNQRALAYLDKADIQPFLQRLGGFESdgrsvsipeIVLIAKICLATGARISEALSLERSQI 226
17981816  147 KSLRKWTAENPLDGVRLFKERETELAFLYERDIYRLLAECDNSRNp-------dLGLIVRICLATGARWSEAETLTQSQV 219
9630357   138 IEAELFFGEHPIRGTKRLKEEKPETGYLTQEEIALLLAALDGDNK-----------KIAILCLSTGARWGEAARLKAENI 206
9628601   147 KSLRKWTTENPLDGVRLFKERETELAFLYERDIYRLLAECDNSRNp-------dLGLIVRICLATGARWSEAETLTQSQV 219
165970235 227 SEFKLTFVETKGKRIRSVPISENLYKeimLASSSSTKIFSTT-YGSAHRYIKKALPDyVPEGQATHVLRHTFATHFMMNR 305
148727179 222 GMGRITFTKTKGKRNRTVPVAPWLLA---MLPRRTGRLFDDC-YADFEKAIRRAGIK-LPAGQSTHVLRHTFASHFMMNG 296
169936064 222 SKYRITYTKTKGKKNRTVPISQDLYD---ELPKNRGKLFTPC-RKAFERAVKRAGIE-LPEGQCTHVLRHTFASHFMMNG 296
109302897 221 IPYKITYINTKSGKNRTIPISPELYN---MLPQRRGRLFGDA-YEAFENAVDRAGID-LPKGQLTHVLRHTFASHFMMNG 295
41057380  224 SPYKLTFTKTKGKKNRTVPITKWLYE---KLSTRQGRMFKPC-YQEFKKMLLLTDIE-LTEGQKTHVLRHTFGAHFMMNG 298
30065733  207 TNCRVTFLKTKNGKKRTVPISEELEKk--VKEEASAKLFKVD-YEKFCGILRRVKPD-IPPNQATHILRHTFASHFMMNG 282
17975106  227 SEFKLTFVETKGKRIRSVPISENLYKeimLASSSSTKIFSTT-YGSAHRYIKKALPDyVPEGQATHVLRHTFATHFMMNR 305
17981816  220 MPYKITFVNTKSKKNRTVPISKELFD---MLPKKRGRLFNDA-YESFENAVLRAEIE-LPKGQLTHVLRHTFASHFMMNG 294
9630357   207 IHNRVTFVKTKTNKPRTVPISEAVAKm--IADNKRGFLFPDAdYPRFRRTMKAIKPD-LPMGQATHALRHSFATHFMING 283
9628601   220 MPYKITFTNTKSKKNRTVPISKELFD---MLPKKRGRLFNDA-YESFENAVLRAEIE-LPKGQLTHVLRHTFASHFMMNG 294
165970235 306 GDILILQRILGHQKIEQTMAYAHFSPDHLIQAVQLNPLEN 345
148727179 297 GNILVLQRILGHTDIKMTMRYAHFAPDHLEDAVRLNPITA 336
169936064 297 GNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHN 336
109302897 296 GNILVLKEILGHSTIEMTMKYAHFAPSHLESAVSLNPLTN 335
41057380  299 GNILVLQKILGHANIRETMKYSHFAPDHLEQAVTLNPLSL 338
30065733  283 GNIIALQQILGHASIQQTMAYAHLAPDYLQNAVALNPLKG 322
17975106  306 GDILILQRILGHQKIEQTMAYAHFSPDHLIQAVQLNPLEN 345
17981816  295 GNILVLKEILGHSTIEMTMRYAHFAPSHLESAVKFNPLSN 334
9630357   284 GSIITLQRILGHTRIEQTMVYAHFAPEYLQDAISLNPLRG 323
9628601   295 GNILVLKEILGHSTIEMTMRYAHFAPSHLESAVKFNPLSN 334
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap