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Report for CCDS9917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9917.1 Public Homo sapiens 14 OTUB2 24 110 108 CCDS HistoryNCBI Gene:78990Re-query CCDS DB by CCDS ID:9917.1Re-query CCDS DB by GeneID:78990See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9917.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000203664.10 ENSP00000203664.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000203664.10Link to Ensembl Protein Viewer:ENSP00000203664.5Re-query CCDS DB by Nucleotide ID:ENST00000203664Re-query CCDS DB by Protein ID:ENSP00000203664
Original member Current member NCBI NM_023112.4 NP_075601.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023112.4Link to Protein Sequence:NP_075601.1Re-query CCDS DB by Nucleotide ID:NM_023112Re-query CCDS DB by Protein ID:NP_075601Link to BLAST:NP_075601.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075601.1 234 Q96DC9-1 234 100% 0 0

Chromosomal Locations for CCDS 9917.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94026538 94026540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94037380 94037475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94038963 94039081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94043971 94044055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94044586 94044780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94045716 94045922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (705 nt):
ATGAGTGAAACATCTTTCAACCTAATATCAGAAAAATGTGACATTCTATCCATTCTTCGGGACCATCCTG
AAAACAGGATTTACCGGAGGAAAATCGAGGAACTCAGCAAAAGGTTCACCGCCATCCGCAAGACCAAAGG
GGATGGGAACTGCTTCTACAGGGCCTTGGGCTATTCCTACCTGGAGTCCCTGCTGGGGAAGAGCAGGGAG
ATCTTCAAGTTCAAAGAACGCGTACTGCAGACCCCAAATGACCTTCTGGCTGCTGGCTTTGAGGAGCACA
AGTTCAGAAACTTCTTCAATGCTTTTTACAGTGTGGTGGAACTGGTAGAGAAGGATGGCTCAGTGTCCAG
CCTGCTGAAGGTGTTCAACGACCAGAGTGCCTCGGACCACATCGTGCAGTTCCTGCGCCTGCTCACGTCG
GCCTTCATCAGGAACCGAGCAGACTTCTTCCGGCACTTCATTGATGAGGAGATGGACATCAAAGACTTCT
GCACTCACGAAGTAGAGCCCATGGCCACGGAGTGTGACCACATCCAGATCACGGCGTTGTCGCAGGCCCT
GAGCATTGCCCTGCAAGTGGAGTACGTGGACGAGATGGATACCGCCCTGAACCACCACGTGTTCCCTGAG
GCCGCCACCCCTTCCGTTTACCTGCTCTATAAAACATCCCACTACAACATCCTTTATGCAGCCGATAAAC
ATTGA

Translation (234 aa):
MSETSFNLISEKCDILSILRDHPENRIYRRKIEELSKRFTAIRKTKGDGNCFYRALGYSYLESLLGKSRE
IFKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEKDGSVSSLLKVFNDQSASDHIVQFLRLLTS
AFIRNRADFFRHFIDEEMDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDEMDTALNHHVFPE
AATPSVYLLYKTSHYNILYAADKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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