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Report for CCDS9860.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9860.1 Public Homo sapiens 14 GSTZ1 24 110 108 CCDS HistoryNCBI Gene:2954Re-query CCDS DB by CCDS ID:9860.1Re-query CCDS DB by GeneID:2954See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9860.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361389.8 ENSP00000354959.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361389.8Link to Ensembl Protein Viewer:ENSP00000354959.4Re-query CCDS DB by Nucleotide ID:ENST00000361389Re-query CCDS DB by Protein ID:ENSP00000354959
Original member Current member EBI ENST00000393734.5 ENSP00000377335.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393734.5Link to Ensembl Protein Viewer:ENSP00000377335.1Re-query CCDS DB by Nucleotide ID:ENST00000393734Re-query CCDS DB by Protein ID:ENSP00000377335
Original member Current member EBI ENST00000557639.5 ENSP00000451927.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557639.5Link to Ensembl Protein Viewer:ENSP00000451927.1Re-query CCDS DB by Nucleotide ID:ENST00000557639Re-query CCDS DB by Protein ID:ENSP00000451927
Original member Current member NCBI NM_001312660.2 NP_001299589.1 Accepted alive Link to Nucleotide Sequence:NM_001312660.2Link to Protein Sequence:NP_001299589.1Re-query CCDS DB by Nucleotide ID:NM_001312660Re-query CCDS DB by Protein ID:NP_001299589Link to BLAST:NP_001299589.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001299589.1 161 O43708-2 161 100% 0 0

Chromosomal Locations for CCDS 9860.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77327502 77327552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77327912 77328037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77329123 77329201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77329755 77329807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77330310 77330359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77331069 77331195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGAAGCAGGTGCCAACCCTGAAGATTGATGGAATCACCATTCACCAGTCACTGGCCATCATTGAGTATC
TAGAGGAGATGCGTCCCACTCCGCGACTTCTGCCTCAGGACCCAAAGAAGAGGGCCAGCGTGCGTATGAT
TTCTGACCTCATCGCTGGTGGCATCCAGCCCCTGCAGAACCTGTCTGTCCTGAAGCAAGTGGGAGAGGAG
ATGCAGCTGACCTGGGCCCAGAACGCCATCACTTGTGGCTTTAACGCCCTGGAGCAGATCCTACAGAGCA
CAGCGGGCATATACTGTGTAGGAGACGAGGTGACCATGGCTGATCTGTGCTTGGTGCCTCAGGTGGCAAA
TGCTGAAAGATTCAAGGTGGATCTCACCCCCTACCCTACCATCAGCTCCATCAACAAGAGGCTGCTGGTC
TTGGAGGCCTTCCAGGTGTCTCACCCCTGCCGGCAGCCAGATACACCCACTGAGCTGAGGGCCTAG

Translation (161 aa):
MKQVPTLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEE
MQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQVANAERFKVDLTPYPTISSINKRLLV
LEAFQVSHPCRQPDTPTELRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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