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Report for CCDS94720.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94720.1 Public Homo sapiens Y DAZ4 24 110 108 CCDS HistoryNCBI Gene:57135Re-query CCDS DB by CCDS ID:94720.1Re-query CCDS DB by GeneID:57135See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 94720.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682740.1 ENSP00000508087.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682740.1Link to Ensembl Protein Viewer:ENSP00000508087.1Re-query CCDS DB by Nucleotide ID:ENST00000682740Re-query CCDS DB by Protein ID:ENSP00000508087
Original member Current member NCBI NM_001388484.1 NP_001375413.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001388484.1Link to Protein Sequence:NP_001375413.1Re-query CCDS DB by Nucleotide ID:NM_001388484Re-query CCDS DB by Protein ID:NP_001375413Link to BLAST:NP_001375413.1

Chromosomal Locations for CCDS 94720.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 24834127 24834129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24840731 24840877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24841152 24841243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24841804 24841855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24842292 24842355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24842445 24842584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24851579 24851725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24852000 24852091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24852652 24852703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24853140 24853203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24853293 24853432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24854833 24854904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24857276 24857347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24859666 24859737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24862062 24862133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24864446 24864517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24866842 24866913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24869219 24869290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24871599 24871670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24873976 24874047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24883764 24883835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24886149 24886220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24888534 24888605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24890918 24890989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24893303 24893374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24895688 24895759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24896505 24896539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 24901112 24901175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2172 nt):
ATGTCTGCTGCAAATCCTGAGACTCCAAACTCAACCATCTCCAGAGAGGCCAGCACCCAGTCTTCATCAG
CTGCAGCTAGCCAAGGCTGGGTGTTACCAGAAGGCAAAATCGTGCCAAACACTGTTTTTGTTGGTGGAAT
TGATGCTAGGATGGATGAAACTGAGATTGGAAGCTGCTTTGGTAGATACGGTTCAGTGAAAGAAGTGAAG
ATAATCACGAATCGAACTGGTGTGTCCAAAGGCTATGGATTTGTTTCGTTTGTTAATGACGTGGATGTCC
AGAAGATAGTAGGATCACAGATACATTTCCATGGTAAAAAGCTGAAGCTGGGCCCTGCAATCAGGAAACA
AAAGTTATGTGCTCGTCATGTGCAGCCACGTCCTTTGGTAGTTAATCCTCCTCCTCCACCACAGTTTCAG
AACGTCTGGCGGAATCCAAACACTGAAACCTACCTGCAGCCCCAAATCACGCCGAATCCTGTAACTCAGC
ACGTTCAGTCTGCTGCAAATCCTGAGACTCCAAACTCAACCATCTCCAGAGAGGCCAGCACCCAGTCTTC
ATCAGCTGCAGCTAGCCAAGGCTGGGTGTTACCAGAAGGCAAAATCGTGCCAAACACTGTTTTTGTTGGT
GGAATTGATGCTAGGATGGATGAAACTGAGATTGGAAGCTGCTTTGGTAGATACGGTTCAGTGAAAGAAG
TGAAGATAATCACGAATCGAACTGGTGTGTCCAAAGGCTATGGATTTGTTTCGTTTGTTAATGACGTGGA
TGTCCAGAAGATAGTAGGATCACAGATACATTTCCATGGTAAAAAGCTGAAGCTGGGCCCTGCAATCAGG
AAACAAAAGTTATGTGCTCGTCATGTGCAGCCACGTCCTTTGGTAGTTAATCCTCCTCCTCCACCACAGT
TTCAGAACGTCTGGCGGAATCCAAACACTGAAACCTACCTGCAGCCCCAAATCACGCCGAATCCTGTAAC
TCAGCACGTTCAGGCTTACTCTGCTTATCCACATTCACCAGGTCAGGTCATCACTGGATGTCAGTTGCTT
GTATATAATTATCAGGAATATCCTACTTATCCCGATTCAGCATTTCAGGTCACCACTGGATATCAGTTGC
CTGTATATAATTATCAGCCATTTCCTGCTTATCCAAGATCACCATTTCAGGTCACTGCTGGATATCAGTT
GCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTGGATATCAG
TTCCCTGTATACAATTATCAGCCATTTCCTGCTTATCCAAGTTCACCATTTCAGGTCACTGCTGGATATC
AGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTGGATA
TCAGTTCCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCAGTTCAGGTCACCACTGGA
TATCAGTTGCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCATTTCAAGTCGCCACTG
GATATCAGTTCCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAATTCACCAGTTCAGGTCACCAC
TGGATATCAGTTGCCTGTATACAATTATCAGGCATTTCCTGCTTATCCAAGTTCACCATTTCAGGTCACC
ACTGGATATCAGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAGTTCACCATTTCAGGTCA
CCACTGGATATCAGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAGTTCACCATTTCAGGT
CACCACTGGATATCAGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAGTTCACCATTTCAG
GTCACCACTGGATATCAGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAGTTCACCATTTC
AGGTCACCACTGGATATCAGTTGCCTGTATATAATTATCAGGCATTTCCTGCTTATCCAAATTCAGCAGT
TCAGGTCACCACTGGATATCAGTTCCATGTATACAATTACCAGATGCCACCGCAGTGCCCTGTTGGGGAG
CAAAGGAGAAATCTGTGGACCGAAGCATACAAATGGTGGTATCTTGTCTGTTTAATCCAGAGAAGAGACT
GA

Translation (723 aa):
MSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK
IITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQ
NVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVG
GIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIR
KQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQAYSAYPHSPGQVITGCQLL
VYNYQEYPTYPDSAFQVTTGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQ
FPVYNYQPFPAYPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTG
YQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVYNYQAFPAYPSSPFQVT
TGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPSSPFQ
VTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPVYNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQCPVGE
QRRNLWTEAYKWWYLVCLIQRRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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