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Report for CCDS94635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94635.1 Public Homo sapiens X DMRTC1B 24 110 108 CCDS HistoryNCBI Gene:728656Re-query CCDS DB by CCDS ID:94635.1Re-query CCDS DB by GeneID:728656See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373533.5 ENSP00000362633.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373533.5Link to Ensembl Protein Viewer:ENSP00000362633.1Re-query CCDS DB by Nucleotide ID:ENST00000373533Re-query CCDS DB by Protein ID:ENSP00000362633
Original member Current member NCBI NM_001370147.1 NP_001357076.1 Accepted alive Link to Nucleotide Sequence:NM_001370147.1Link to Protein Sequence:NP_001357076.1Re-query CCDS DB by Nucleotide ID:NM_001370147Re-query CCDS DB by Protein ID:NP_001357076Link to BLAST:NP_001357076.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357076.1 127 Q5HYR2-2 127 100% 0 0

Chromosomal Locations for CCDS 94635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72845136 72845199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72845499 72845557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72847130 72847277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72848263 72848375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGGCTGCCCCTCCCAAAGCTCCCATCCGTGTCAGGAATTTGACCATCAGAGCAGGAGCCCTCACTGGGA
AGGAGAACAACATGCTGCAGCCCGAGACCCACATCTTCACAGCCCCCGAGGAGGTCCCCAAAGTCTCTGA
CCAGGCTTTGGTTTCTGCCCACTCAGAGTGGCAGCGGAAGCTGGAGGCCGCTGAGGCTCTGCTGACTCTG
AGAAACTCTGCCCAGGCCCCTCCTGACTCCATCTCCCTGCACCAGCCTTGCAACCCACCAGCTCCTGCTG
GAGATAAAGGATTCCAGCCTCCCAGCCCCTCTCTCCGCCCCAGGCCAGCCAGCTCCATCTCGCTGCCTAT
TGGACATCTGGGATGCATCTCCCTCTTGAGCTAG

Translation (127 aa):
MAAPPKAPIRVRNLTIRAGALTGKENNMLQPETHIFTAPEEVPKVSDQALVSAHSEWQRKLEAAEALLTL
RNSAQAPPDSISLHQPCNPPAPAGDKGFQPPSPSLRPRPASSISLPIGHLGCISLLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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