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Report for CCDS9428.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9428.1 Public Homo sapiens 13 INTS6 24 110 108 CCDS HistoryNCBI Gene:26512Re-query CCDS DB by CCDS ID:9428.1Re-query CCDS DB by GeneID:26512See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9428.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311234.9 ENSP00000310260.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311234.9Link to Ensembl Protein Viewer:ENSP00000310260.4Re-query CCDS DB by Nucleotide ID:ENST00000311234Re-query CCDS DB by Protein ID:ENSP00000310260
Original member Current member NCBI NM_012141.3 NP_036273.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012141.3Link to Protein Sequence:NP_036273.1Re-query CCDS DB by Nucleotide ID:NM_012141Re-query CCDS DB by Protein ID:NP_036273Link to BLAST:NP_036273.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036273.1 887 Q9UL03-1 887 100% 0 0

Chromosomal Locations for CCDS 9428.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51365752 51365845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51367805 51367898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51368939 51369310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51374208 51374439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51374654 51374796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51376048 51376174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51378239 51378454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51379462 51379572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51382029 51382123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51383329 51383461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51383589 51383741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51387386 51387540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51389319 51389444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51395300 51395483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51430294 51430383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51451025 51451174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51451978 51452055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51452415 51452525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2664 nt):
ATGCCCATCTTACTGTTCCTGATAGACACGTCTGCCTCTATGAACCAGCGCAGCCATCTGGGCACCACCT
ACCTGGACACGGCCAAAGGCGCGGTAGAGACCTTCATGAAGCTCCGTGCCCGGGACCCTGCCAGCAGAGG
AGACAGGTATATGCTGGTCACTTTCGAAGAGCCGCCCTATGCTATCAAGGCTGGATGGAAAGAAAACCAT
GCAACGTTTATGAATGAATTGAAAAACCTTCAGGCTGAAGGACTTACGACTCTTGGCCAATCCCTAAGGA
CAGCTTTTGATTTATTAAATTTAAATAGATTAGTAACTGGCATAGACAACTATGGGCAGGGAAGAAACCC
TTTTTTCTTGGAGCCAGCAATAATTATCACAATTACTGATGGGAGCAAGTTGACTACCACCAGTGGAGTC
CAGGATGAGCTTCATTTACCTCTTAATTCTCCTTTGCCTGGAAGTGAATTGACCAAGGAACCTTTTCGTT
GGGATCAGAGACTCTTTGCATTAGTGTTGCGGTTGCCTGGCACCATGTCAGTAGAATCAGAACAGTTGAC
AGGTGTGCCTTTAGATGACTCTGCAATCACACCAATGTGTGAAGTGACAGGCGGCCGTTCATATTCTGTG
TGTTCTCCAAGAATGCTTAATCAGTGTCTGGAGTCCTTGGTGCAGAAAGTACAAAGTGGGGTGGTAATAA
ACTTTGAAAAAGCAGGACCAGATCCTTCCCCTGTAGAAGATGGGCAGCCAGATATATCAAGGCCTTTTGG
ATCTCAGCCTTGGCATAGCTGTCACAAACTCATATATGTCAGACCAAATCCTAAAACTGGGGTTCCTATA
GGTCATTGGCCTGTTCCAGAGTCTTTTTGGCCAGATCAAAATTCGCCAACACTACCACCTCGTACATCTC
ATCCTGTAGTGAAGTTTTCCTGTACAGACTGTGAACCAATGGTTATTGATAAACTTCCTTTTGACAAATA
TGAGTTGGAACCTTCACCACTGACTCAATTTATCCTGGAAAGGAAATCTCCTCAAACATGTTGGCAGGTG
TACGTGAGCAATAGTGCAAAATACAGTGAACTTGGTCATCCTTTTGGTTACTTGAAAGCCAGTACAGCAC
TGAACTGTGTCAACTTATTTGTGATGCCTTACAATTATCCAGTCCTTCTTCCCCTCTTAGATGACTTGTT
TAAAGTGCATAAAGCAAAACCAACATTGAAGTGGAGACAGTCATTTGAAAGTTATTTGAAGACAATGCCT
CCCTACTATCTTGGGCCCTTGAAGAAAGCTGTTAGGATGATGGGAGCACCTAACCTAATAGCAGACAGTA
TGGAATATGGACTTAGTTACAGTGTCATTTCATACCTCAAAAAACTGAGTCAACAGGCCAAAATAGAATC
TGATCGAGTCATTGGATCTGTAGGCAAAAAAGTAGTACAGGAGACTGGAATAAAAGTCCGGAGCCGATCA
CATGGTTTATCAATGGCATATAGGAAAGATTTTCAACAACTCCTCCAGGGAATTTCAGAGGATGTCCCTC
ACAGACTGCTAGACCTTAATATGAAGGAATACACTGGGTTCCAAGTTGCTTTGCTGAATAAGGATTTGAA
GCCACAGACATTTAGAAATGCTTATGACATACCAAGACGAAATCTTTTGGATCACTTAACAAGAATGAGA
TCTAATCTTTTGAAGAGCACTCGCAGATTTCTGAAAGGACAGGACGAAGATCAAGTGCACAGTGTTCCTA
TAGCACAAATGGGGAACTACCAGGAATACCTCAAGCAAGTACCTTCTCCACTAAGAGAACTTGATCCTGA
TCAGCCACGAAGGTTGCATACATTTGGCAACCCCTTTAAGCTGGATAAGAAGGGTATGATGATAGATGAA
GCAGATGAATTTGTGGCTGGACCTCAAAATAAACATAAACGACCCGGAGAACCAAATATGCAAGGGATCC
CTAAAAGACGTCGGTGTATGTCTCCACTACTAAGAGGCAGACAGCAGAATCCTGTTGTAAACAATCATAT
TGGGGGAAAAGGACCACCTGCACCTACAACTCAAGCACAGCCAGATCTTATTAAACCTCTTCCTCTTCAT
AAAATTTCAGAAACCACTAATGATTCGATAATACATGATGTGGTTGAAAATCATGTTGCAGACCAACTTT
CATCAGACATTACACCAAATGCTATGGATACGGAATTTTCAGCATCTTCTCCAGCCAGTTTACTGGAACG
GCCAACCAATCATATGGAGGCTCTTGGTCATGACCATTTAGGAACCAATGACCTCACTGTTGGTGGATTT
TTAGAAAATCATGAGGAGCCAAGAGATAAAGAACAATGTGCTGAAGAGAACATACCAGCATCTTCACTCA
ACAAAGGAAAGAAATTGATGCATTGCAGAAGCCATGAAGAGGTCAATACTGAACTAAAAGCACAAATAAT
GAAAGAGATCCGAAAGCCAGGAAGAAAATATGAAAGAATCTTCACTTTACTGAAGCATGTGCAAGGCAGT
TTACAAACAAGACTAATATTTTTACAAAATGTCATTAAAGAAGCATCAAGGTTTAAAAAACGAATGCTAA
TAGAACAACTGGAGAACTTCTTGGATGAAATTCATCGAAGAGCCAATCAGATCAACCATATTAATAGCAA
TTAA

Translation (887 aa):
MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPASRGDRYMLVTFEEPPYAIKAGWKENH
ATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGV
QDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVESEQLTGVPLDDSAITPMCEVTGGRSYSV
CSPRMLNQCLESLVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKTGVPI
GHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQFILERKSPQTCWQV
YVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDLFKVHKAKPTLKWRQSFESYLKTMP
PYYLGPLKKAVRMMGAPNLIADSMEYGLSYSVISYLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRS
HGLSMAYRKDFQQLLQGISEDVPHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMR
SNLLKSTRRFLKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDE
ADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGPPAPTTQAQPDLIKPLPLH
KISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASSPASLLERPTNHMEALGHDHLGTNDLTVGGF
LENHEEPRDKEQCAEENIPASSLNKGKKLMHCRSHEEVNTELKAQIMKEIRKPGRKYERIFTLLKHVQGS
LQTRLIFLQNVIKEASRFKKRMLIEQLENFLDEIHRRANQINHINSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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