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Report for CCDS94278.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94278.1 Public Homo sapiens 8 NRG1 24 110 108 CCDS HistoryNCBI Gene:3084Re-query CCDS DB by CCDS ID:94278.1Re-query CCDS DB by GeneID:3084See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94278.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650819.1 ENSP00000498946.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650819.1Link to Ensembl Protein Viewer:ENSP00000498946.1Re-query CCDS DB by Nucleotide ID:ENST00000650819Re-query CCDS DB by Protein ID:ENSP00000498946
Original member Current member NCBI NM_001322207.2 NP_001309136.1 Accepted alive Link to Nucleotide Sequence:NM_001322207.2Link to Protein Sequence:NP_001309136.1Re-query CCDS DB by Nucleotide ID:NM_001322207Re-query CCDS DB by Protein ID:NP_001309136Link to BLAST:NP_001309136.1

Chromosomal Locations for CCDS 94278.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 32647718 32648384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32727949 32728078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32742675 32742733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32749561 32749584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32754372 32754474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32756403 32756529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32759306 32759436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 32760200 32760410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGGAGATTTATTCCCCAGACATGTCTGAGGTCGCCGCCGAGAGGTCCTCCAGCCCCTCCACTCAGCTGA
GTGCAGACCCATCTCTTGATGGGCTTCCGGCAGCAGAAGACATGCCAGAGCCCCAGACTGAAGATGGGAG
AACCCCTGGACTCGTGGGCCTGGCCGTGCCCTGCTGTGCGTGCCTAGAAGCTGAGCGCCTGAGAGGTTGC
CTCAACTCAGAGAAAATCTGCATTGTCCCCATCCTGGCTTGCCTGGTCAGCCTCTGCCTCTGCATCGCCG
GCCTCAAGTGGGTATTTGTGGACAAGATCTTTGAATATGACTCTCCTACTCACCTTGACCCTGGGGGGTT
AGGCCAGGACCCTATTATTTCTCTGGACGCAACTGCTGCCTCAGCTGTGTGGGTGTCGTCTGAGGCATAC
ACTTCACCTGTCTCTAGGGCTCAATCTGAAAGTGAGGTTCAAGTTACAGTGCAAGGTGACAAGGCTGTTG
TCTCCTTTGAACCATCAGCGGCACCGACACCGAAGAATCGTATTTTTGCCTTTTCTTTCTTGCCGTCCAC
TGCGCCATCCTTCCCTTCACCCACCCGGAACCCTGAGGTGAGAACGCCCAAGTCAGCAACTCAGCCACAA
ACAACAGAAACTAATCTCCAAACTGCTCCTAAACTTTCTACATCTACATCCACCACTGGGACAAGCCATC
TTGTAAAATGTGCGGAGAAGGAGAAAACTTTCTGTGTGAATGGAGGGGAGTGCTTCATGGTGAAAGACCT
TTCAAACCCCTCGAGATACTTGTGCAAGTGCCCAAATGAGTTTACTGGTGATCGCTGCCAAAACTACGTA
ATGGCCAGCTTCTACAAGCATCTTGGGATTGAATTTATGGAGGCGGAGGAGCTGTACCAGAAGAGAGTGC
TGACCATAACCGGCATCTGCATCGCCCTCCTTGTGGTCGGCATCATGTGTGTGGTGGCCTACTGCAAAAC
CAAGAAACAGCGGAAAAAGCTGCATGACCGTCTTCGGCAGAGCCTTCGGTCTGAACGAAACAATATGATG
AACATTGCCAATGGGCCTCACCATCCTAACCCACCCCCCGAGAATGTCCAGCTGGTGAATCAATACGTAT
CTAAAAACGTCATCTCCAGTGAGCATATTGTTGAGAGAGAAGCAGAGACATCCTTTTCCACCAGTCACTA
TACTTCCACAGCCCATCACTCCACTACTGTCACCCAGACTCCTAGCCACAGCTGGAGCAACGGACACACT
GAAAGCATCCTTTCCGAAAGCCACTCTGTAATCGTGATGTCATCCGTAGAAAACAGTAGGCACAGCAGCC
CAACTGGGGGCCCAAGAGGACGTCTTAATGGCACAGGAGGCCCTCGTGAATGTAACAGCTTCCTCAGGCA
TGCCAGAGAAACCCCTGATTCCTACCGAGACTCTCCTCATAGTGAAAGGTAA

Translation (483 aa):
MEIYSPDMSEVAAERSSSPSTQLSADPSLDGLPAAEDMPEPQTEDGRTPGLVGLAVPCCACLEAERLRGC
LNSEKICIVPILACLVSLCLCIAGLKWVFVDKIFEYDSPTHLDPGGLGQDPIISLDATAASAVWVSSEAY
TSPVSRAQSESEVQVTVQGDKAVVSFEPSAAPTPKNRIFAFSFLPSTAPSFPSPTRNPEVRTPKSATQPQ
TTETNLQTAPKLSTSTSTTGTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV
MASFYKHLGIEFMEAEELYQKRVLTITGICIALLVVGIMCVVAYCKTKKQRKKLHDRLRQSLRSERNNMM
NIANGPHHPNPPPENVQLVNQYVSKNVISSEHIVEREAETSFSTSHYTSTAHHSTTVTQTPSHSWSNGHT
ESILSESHSVIVMSSVENSRHSSPTGGPRGRLNGTGGPRECNSFLRHARETPDSYRDSPHSER


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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